Microarray experiments to specifically-expressed genes

GSM ID GSM131464
Assay name AtGen_6-9512_Heatstress(3h)+9hrecovery-Shoots-12.0h_Rep2
GSE experiment GSE5628: AtGenExpress: Stress Treatments (Heat stress)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
46.699.8199.1At5g59720836093HSP18.2 (heat shock protein 18.2)encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.O.I.C.G.H.G.
31.499.717.8At3g16360820883AHP4 (HPT PHOSPHOTRANSMITTER 4)Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).O.I.C.G.H.G.
29.499.7118.4At3g55630824729ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D)F:tetrahydrofolylpolyglutamate synthase activity;P:one-carbon compound metabolic process;C:cytosol;BOFMPAO.I.C.G.H.G.
27.799.759.9At5g13730831218SIG4 (SIGMA FACTOR 4)Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.O.I.C.G.H.G.
27.699.761.5At4g12830826895hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:chloroplast;BOMPFAO.I.C.G.H.G.
25.499.610.1At3g10150820178PAP16 (PURPLE ACID PHOSPHATASE 16)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:membrane;FBPOO.I.C.G.H.G.
24.999.6121.2At4g10120826603ATSPS4FEncodes a protein with putative sucrose-phosphate synthase activity.O.I.C.G.H.G.
23.799.676.3At3g30720822807QQS (QUA-QUINE STARCH)F:molecular_function unknown;P:starch biosynthetic process;C:cytosol;PO.I.C.G.H.G.
22.599.636.3At5g59670836088leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
22.299.642.9At5g58310835943MES18 (METHYL ESTERASE 18)Encodes a protein shown to have methyl IAA esterase activity in vitro. This protein does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro.O.I.C.G.H.G.
22.199.618.2At5g44410834467FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMO.I.C.G.H.G.
21.799.615.5At2g32290817789BAM6 (BETA-AMYLASE 6)F:cation binding, beta-amylase activity, catalytic activity;P:cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process;C:chloroplast;PBOO.I.C.G.H.G.
19.199.615.8At4g19510827692disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMOBFAO.I.C.G.H.G.
17.899.539.8At5g02830831772pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:chloroplast;POMFBAO.I.C.G.H.G.
17.899.535.7At4g09350826517DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAVO.I.C.G.H.G.
17.799.541.5At3g01660821098methyltransferaseF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BOPMAFO.I.C.G.H.G.
17.499.5139.3At5g58260835938-Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.O.I.C.G.H.G.
17.299.545.3At3g10840820253hydrolase, alpha/beta fold family proteinF:hydrolase activity, catalytic activity;P:unknown;C:chloroplast envelope;BOMPFAVO.I.C.G.H.G.
16.899.5108.8At3g28270822453-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOAFVO.I.C.G.H.G.
16.299.565.1At3g01440821143oxygen evolving enhancer 3 (PsbQ) family proteinF:calcium ion binding;P:photosynthesis, light reaction;C:chloroplast thylakoid membrane, chloroplast photosystem II, chloroplast thylakoid lumen, chloroplast, oxygen evolving complex;PO.I.C.G.H.G.
15.899.525.0At1g69523843286UbiE/COQ5 methyltransferase family proteinF:methyltransferase activity;P:metabolic process;C:chloroplast;BOFAMPO.I.C.G.H.G.
15.799.5136.9At5g63780836498SHA1 (shoot apical meristem arrest 1)Encodes SHA1 (shoot apical meristem arrest), a putative E3 ligase (a RING finger protein) required for post-embryonic SAM maintenance. The mutant sha1-1 shows a primary SAM-deficient phenotype at the adult stage.O.I.C.G.H.G.
15.699.545.9At1g26230839164chaperonin, putativeF:protein binding, ATP binding;P:cellular protein metabolic process;C:chloroplast;BOMFPAVO.I.C.G.H.G.
15.099.435.3At5g62140836334unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOO.I.C.G.H.G.
14.699.491.8At1g74880843827NDH-O (NAD(P)H:plastoquinone dehydrogenase complex subunit O)Encodes subunit NDH-O of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.O.I.C.G.H.G.
14.299.436.9At1g04620839472coenzyme F420 hydrogenase family / dehydrogenase, beta subunit familyF:coenzyme F420 hydrogenase activity;P:biological_process unknown;C:chloroplast;BAOPO.I.C.G.H.G.
14.199.4114.6At3g16250820871NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.O.I.C.G.H.G.
14.099.445.1At1g58848842226ATP binding / protein bindingF:protein binding, ATP binding;P:defense response, apoptosis;C:unknown;PBMOFAO.I.C.G.H.G.
13.899.421.8At3g22150821779pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:chloroplast;POMFBAO.I.C.G.H.G.
13.499.486.0At4g18370827564DEG5 (DEGP PROTEASE 5)Encodes DEG5. Forms a hexamer with DEG8 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII).O.I.C.G.H.G.
13.499.484.3At5g37260833700RVE2 (REVEILLE 2)Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis.O.I.C.G.H.G.
13.299.483.2At4g12310826840CYP706A5member of CYP706AO.I.C.G.H.G.
13.199.433.1At5g56850835787unknown proteinF:unknown;P:unknown;C:unknown;OMBFPAVO.I.C.G.H.G.
13.099.435.9At1g07640837277OBP2A member of the DOF transcription factors. Prominently expressed in the phloem of leaves and other organs. Expression is induced by wounding, MeJA and insect feeding. Upregulates glucosinolate biosynthesis.O.I.C.G.H.G.
13.099.46.5At4g31115829239unknown proteinF:unknown;P:unknown;C:unknown;OBPO.I.C.G.H.G.
12.899.395.7At1g01790837332KEA1 (K EFFLUX ANTIPORTER 1)K efflux antiporter KEA1O.I.C.G.H.G.
12.899.387.1At1g07440837256tropinone reductase, putative / tropine dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
12.899.344.2At1g60590842353polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBMOVAO.I.C.G.H.G.
12.799.345.6At1g22630838869unknown proteinF:unknown;P:unknown;C:chloroplast;MPBOO.I.C.G.H.G.
12.499.396.7At5g17310831596UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putativeF:UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity;P:response to cadmium ion, response to salt stress, metabolic process;C:plasma membrane;MBFPOO.I.C.G.H.G.
12.399.334.7At1g71810843511ABC1 family proteinF:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast, plastoglobule;OBMPFAVO.I.C.G.H.G.
12.299.317.3At4g09040826483RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:chloroplast stroma, chloroplast;MPFOBAO.I.C.G.H.G.
12.199.36.7At4g36470829799S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFO.I.C.G.H.G.
11.999.352.0At1g49380841361cytochrome c biogenesis protein familyF:molecular_function unknown;P:cytochrome complex assembly;C:chloroplast;BOPMO.I.C.G.H.G.
11.999.346.3At5g39210833917CRR7 (CHLORORESPIRATORY REDUCTION 7)Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex.O.I.C.G.H.G.
11.799.355.4At1g54350841876ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:chloroplast;BOMFAPVO.I.C.G.H.G.
11.799.332.8At2g36430818217unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.699.316.5At4g30825829206pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:cell cycle;C:nucleus;POMFBAO.I.C.G.H.G.
11.599.361.4At2g24280816963serine carboxypeptidase S28 family proteinF:serine-type peptidase activity, serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system, lysosome;MOFPBO.I.C.G.H.G.
11.599.332.7At4g18810827615binding / catalytic/ transcription repressorF:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:chloroplast, vacuole;BOPFAMO.I.C.G.H.G.
11.599.330.5At4g23260828425ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:response to abscisic acid stimulus;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
11.499.347.1At4g33500829488protein phosphatase 2C-related / PP2C-relatedF:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:chloroplast;MOBFPAVO.I.C.G.H.G.
11.499.311.4At5g66520836784pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAO.I.C.G.H.G.
11.299.235.5At4g31850829314PGR3 (PROTON GRADIENT REGULATION 3)encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifsO.I.C.G.H.G.
11.199.262.8At4g19530827695disease resistance protein (TIR-NBS-LRR class), putativeEncodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death.O.I.C.G.H.G.
11.199.234.8At5g20935832218unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;BPOO.I.C.G.H.G.
11.099.241.4At4g29590829080methyltransferaseF:methyltransferase activity;P:metabolic process;C:chloroplast;BOPAFO.I.C.G.H.G.
10.899.263.5At3g10940820265protein phosphatase-relatedF:phosphatase activity, protein tyrosine/serine/threonine phosphatase activity;P:protein amino acid dephosphorylation, dephosphorylation;C:chloroplast;MOPFVBAO.I.C.G.H.G.
10.799.2157.2At1g78020844137senescence-associated protein-relatedF:unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
10.799.2114.1At3g26450822250major latex protein-related / MLP-relatedF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
10.799.258.6At3g48200823977unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOPO.I.C.G.H.G.
10.699.257.7At3g47430823897PEX11Bmember of the peroxin11 (PEX11) gene family, located on the peroxisome membrane, controls peroxisome proliferation.O.I.C.G.H.G.
10.699.251.3At3g16910820946AAE7 (ACYL-ACTIVATING ENZYME 7)Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.O.I.C.G.H.G.
10.699.233.4At4g27820828895BGLU9 (BETA GLUCOSIDASE 9)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:peroxisome;BOPMFAO.I.C.G.H.G.
10.699.222.1At3g05340819698pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFO.I.C.G.H.G.
10.499.284.7At1g56500842103haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, oxidoreductase activity, catalytic activity;P:metabolic process, cell redox homeostasis;C:chloroplast, chloroplast stroma;BOMPAFVO.I.C.G.H.G.
10.399.281.4At1g16080838178unknown proteinF:unknown;P:unknown;C:apoplast, chloroplast stroma, chloroplast, chloroplast envelope;POBO.I.C.G.H.G.
10.399.272.3At4g39710830126immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeF:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BMOPFAO.I.C.G.H.G.
10.399.225.7At2g39850818572identical protein binding / serine-type endopeptidaseF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAMO.I.C.G.H.G.
10.299.2106.2At5g24150832480SQP1squalene monooxygenase gene homologO.I.C.G.H.G.
10.299.247.1At5g27290832787unknown proteinF:unknown;P:unknown;C:chloroplast;PBOO.I.C.G.H.G.
10.199.243.8At2g03550814884hydrolaseF:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAVO.I.C.G.H.G.
10.099.230.6At3g46530823806RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13)Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.O.I.C.G.H.G.
10.099.220.3At3g28080822432nodulin MtN21 family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PBOAMO.I.C.G.H.G.
9.999.150.0At5g42310834236pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:chloroplast;POMFBAO.I.C.G.H.G.
9.899.1129.6At2g39470818532PPL2 (PsbP-like protein 2)F:calcium ion binding;P:photosynthesis;C:in 6 components;PBOO.I.C.G.H.G.
9.799.150.0At5g53170835398FTSH11 (FtsH protease 11)encodes an FtsH protease that is localized to the chloroplast and the mitochondrionO.I.C.G.H.G.
9.799.116.7At5g55740835668CRR21 (chlororespiratory reduction 21)Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity.O.I.C.G.H.G.
9.699.1111.6At1g65230842830unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO.I.C.G.H.G.
9.699.155.8At1g66820843000glycine-rich proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;MPOBVFAO.I.C.G.H.G.
9.699.148.3At2g23390816871-F:molecular_function unknown;P:biological_process unknown;C:unknown;OBPO.I.C.G.H.G.
9.699.145.9At5g49030834962OVA2 (ovule abortion 2)F:nucleotide binding, isoleucine-tRNA ligase activity, aminoacyl-tRNA ligase activity, catalytic activity, ATP binding;P:ovule development, tRNA aminoacylation for protein translation;C:chloroplast;OBMAFPO.I.C.G.H.G.
9.599.179.8At2g03420814871unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
9.599.149.8At4g18240827550ATSS4F:transferase activity, transferring glycosyl groups;P:starch metabolic process;C:chloroplast;MOBPFAVO.I.C.G.H.G.
9.599.123.0At2g19650816484DC1 domain-containing proteinF:unknown;P:intracellular signaling cascade;C:unknown;POMO.I.C.G.H.G.
9.499.1133.9At2g21970816733SEP2 (STRESS ENHANCED PROTEIN 2)stress enhanced protein 2 (SEP2) chlorophyll a/b-binding proteinO.I.C.G.H.G.
9.499.1123.6At1g70760843413CRR23 ((chlororespiratory reduction 23)a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.O.I.C.G.H.G.
9.499.191.1At2g30390817589FC2 (FERROCHELATASE 2)Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis. FC-II is speculated to operate in photosynthetic cytochromesO.I.C.G.H.G.
9.499.180.0At1g31800840067CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)Encodes a protein with β-ring carotenoid hydroxylase activity.O.I.C.G.H.G.
9.499.165.6At5g27560832816unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OBPO.I.C.G.H.G.
9.499.132.6At1g07050837216CONSTANS-like protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFO.I.C.G.H.G.
9.499.129.4At1g78180844154bindingF:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOO.I.C.G.H.G.
9.399.140.2At5g59770836098-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
9.399.132.1At1g49010841324myb family transcription factorF:transcription factor activity, DNA binding;P:in 6 processes;C:unknown;PMOFBVO.I.C.G.H.G.
9.299.1134.5At1g18730838455NDF6 (NDH DEPENDENT FLOW 6)likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.O.I.C.G.H.G.
9.299.1128.2At1g70890843427MLP43 (MLP-LIKE PROTEIN 43)F:molecular_function unknown;P:response to biotic stimulus, defense response;C:chloroplast;PO.I.C.G.H.G.
9.099.1163.8At5g13650831209elongation factor family proteinF:GTP binding, translation elongation factor activity, GTPase activity;P:unknown;C:chloroplast, chloroplast stroma;BOMFPAO.I.C.G.H.G.
9.099.164.1At5g53580835440aldo/keto reductase family proteinF:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:chloroplast;BOMFPAO.I.C.G.H.G.
9.099.149.9At1g61180842411disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:plasma membrane;PMBOFAO.I.C.G.H.G.
9.099.112.2At3g29290822586emb2076 (embryo defective 2076)F:unknown;P:embryonic development ending in seed dormancy;C:unknown;POFMBAO.I.C.G.H.G.



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