Microarray experiments to specifically-expressed genes

GSM ID GSM131453
Assay name AtGen_6-9321_Heatstress-Roots-3.0h_Rep1
GSE experiment GSE5628: AtGenExpress: Stress Treatments (Heat stress)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
903.5100.0154.5At1g72660843598developmentally regulated GTP-binding protein, putativeF:GTP binding;P:unknown;C:intracellular;BOMAFPO.I.C.G.H.G.
791.5100.0231.5At3g09640820121APX2 (ASCORBATE PEROXIDASE 2)Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.O.I.C.G.H.G.
609.7100.0425.3At4g21320827880HSA32 (HEAT-STRESS-ASSOCIATED 32)Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment.O.I.C.G.H.G.
518.7100.0158.0At4g23493828448unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
495.0100.0447.7At1g5256084168726.5 kDa class I small heat shock protein-like (HSP26.5-P)F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:mitochondrion;BPOFAMVO.I.C.G.H.G.
457.0100.057.7At3g07150819901unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
400.6100.0372.6At4g27670828881HSP21 (HEAT SHOCK PROTEIN 21)chloroplast located small heat shock protein.O.I.C.G.H.G.
323.3100.0339.7At4g12400826849stress-inducible protein, putativeF:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAVO.I.C.G.H.G.
300.4100.0406.1At2g32120817771HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2)F:ATP binding;P:protein folding, response to high light intensity, response to hydrogen peroxide, response to heat;C:cellular_component unknown;OBMFPAVO.I.C.G.H.G.
287.0100.0308.2At5g3767083374615.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)F:molecular_function unknown;P:response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
271.3100.0423.0At4g10250826616ATHSP22.0Columbia endomembrane-localized small heat shock proteinO.I.C.G.H.G.
248.3100.0411.2At4g25200828623ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrialO.I.C.G.H.G.
244.0100.0378.3At2g46240819232BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6)A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.O.I.C.G.H.G.
234.4100.0446.5At5g59720836093HSP18.2 (heat shock protein 18.2)encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.O.I.C.G.H.G.
232.8100.0256.7At2g41160818715ubiquitin-associated (UBA)/TS-N domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;FMPOO.I.C.G.H.G.
206.1100.0507.9At5g48570834913peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeF:FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding;P:protein folding;C:vacuole;BMOFPAO.I.C.G.H.G.
204.2100.0391.8At5g12020831075HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMO.I.C.G.H.G.
195.9100.0425.2At2g47180819331AtGolS1 (Arabidopsis thaliana galactinol synthase 1)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBOO.I.C.G.H.G.
186.0100.0101.6At2g25140817052CLPB4 (CASEIN LYTIC PROTEINASE B4)Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.O.I.C.G.H.G.
182.5100.0221.8At1g03070839581glutamate bindingF:glutamate binding;P:biological_process unknown;C:cellular_component unknown;BOMPFVO.I.C.G.H.G.
179.8100.0442.9At1g07350837246transformer serine/arginine-rich ribonucleoprotein, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:RNA splicing;C:unknown;MPFOBVAO.I.C.G.H.G.
169.8100.0453.2At1g74310843771ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101)Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.O.I.C.G.H.G.
165.8100.0473.9At1g16030838174Hsp70b (heat shock protein 70B)F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVAO.I.C.G.H.G.
161.799.9244.6At2g20560816578DNAJ heat shock family proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVO.I.C.G.H.G.
159.799.9485.9At1g5354084178917.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMO.I.C.G.H.G.
152.799.9620.1At3g46230823768ATHSP17.4member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seedsO.I.C.G.H.G.
150.999.9525.8At3g24500822041MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C)One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses.O.I.C.G.H.G.
148.299.9519.2At1g0740083725217.8 kDa class I heat shock protein (HSP17.8-CI)F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
146.899.9473.2At2g2950081749917.6 kDa class I small heat shock protein (HSP17.6B-CI)F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
141.199.9171.7At5g35320833486unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
139.999.9127.9At1g71000843439heat shock protein bindingF:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
137.799.9285.3At5g12110831084elongation factor 1B alpha-subunit 1 (eEF1Balpha1)F:translation elongation factor activity;P:translational elongation;C:eukaryotic translation elongation factor 1 complex;MOPFO.I.C.G.H.G.
136.399.930.1At3g63350825510AT-HSFA7Bmember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
136.199.9501.5At5g12030831076AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.O.I.C.G.H.G.
133.299.9295.7At5g25450832619ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeF:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFOO.I.C.G.H.G.
133.199.992.0At3g08970820049ATERDJ3AJ domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.O.I.C.G.H.G.
124.199.9234.6At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMO.I.C.G.H.G.
123.099.9231.6At1g30070839886SGS domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFO.I.C.G.H.G.
120.799.9116.7At5g47830834834unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
109.899.9334.6At1g5405084184317.4 kDa class III heat shock protein (HSP17.4-CIII)F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
100.899.9219.5At3g16050820850A37Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.O.I.C.G.H.G.
97.799.9208.7At2g26150817155ATHSFA2member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.O.I.C.G.H.G.
97.699.9182.5At4g09150826496T-complex protein 11F:phosphopantetheine binding;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
97.599.9282.2At3g09350820091armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
94.999.955.0At2g077772745461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
94.499.957.5At1g66080842922unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
93.399.9329.6At3g25230822117ROF1 (ROTAMASE FKBP 1)Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.O.I.C.G.H.G.
92.799.9226.2At3g53230824489cell division cycle protein 48, putative / CDC48, putativeF:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAVO.I.C.G.H.G.
90.999.9494.5At5g52640835341ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.O.I.C.G.H.G.
89.899.965.1At2g15790816074SQN (SQUINT)SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot.O.I.C.G.H.G.
84.399.938.5At1g66510842969AAR2 protein familyF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBO.I.C.G.H.G.
83.799.934.5At1g35660840468unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFBO.I.C.G.H.G.
81.199.9268.7At4g36990829853HSF4 (HEAT SHOCK FACTOR 4)encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.O.I.C.G.H.G.
78.999.9249.6At1g55530842000zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVBO.I.C.G.H.G.
78.499.9168.4At1g09140837433SF2/ASF-like splicing modulator (SRP30)Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.O.I.C.G.H.G.
77.099.9470.8At3g10020820163unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;PMO.I.C.G.H.G.
76.399.913.7At2g30480817598unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBO.I.C.G.H.G.
74.999.999.5At5g58787835995zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.
73.199.9432.5At3g12050820379Aha1 domain-containing proteinF:ATPase activator activity, chaperone binding;P:response to stress;C:cytoplasm;MFOPBO.I.C.G.H.G.
73.099.9119.5At1g01940839309peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinF:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:cellular_component unknown;OBMFPAO.I.C.G.H.G.
72.199.927.6At2g07674815346unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PVMOBO.I.C.G.H.G.
71.499.9265.3At5g09590830818MTHSC70-2 (MITOCHONDRIAL HSP70 2)heat shock protein 70 (Hsc70-5); nuclearO.I.C.G.H.G.
70.499.9126.0At4g26270828733PFK3 (PHOSPHOFRUCTOKINASE 3)F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex;BOMFPAVO.I.C.G.H.G.
70.099.935.1At5g67430836879GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PBAO.I.C.G.H.G.
69.799.999.7At2g19580816477TET2 (TETRASPANIN2)Member of TETRASPANIN familyO.I.C.G.H.G.
69.299.940.6At3g01070821257plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PO.I.C.G.H.G.
65.699.822.1At2g01430814671ATHB17 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17)F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOVO.I.C.G.H.G.
64.199.8174.8At5g11680831040unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, plasma membrane;MOFPO.I.C.G.H.G.
62.699.8115.6At4g15420827213PRLI-interacting factor KF:peptidase activity, zinc ion binding;P:proteolysis, ubiquitin-dependent protein catabolic process;C:intracellular;MOFPBO.I.C.G.H.G.
59.999.828.7At1g51840841611protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
58.999.890.4At5g19875832109unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;PO.I.C.G.H.G.
57.499.8202.7At2g076993768015-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
56.799.837.8At4g11660826771AT-HSFB2Bmember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
55.699.8203.1At2g19310816448-F:molecular_function unknown;P:response to oxidative stress, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;PFOO.I.C.G.H.G.
55.199.8116.9At1g26800839223zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
53.199.8551.2At3g12580820438HSP70 (heat shock protein 70)F:ATP binding;P:in 8 processes;C:cytosol, mitochondrion, cell wall, plasma membrane;OBMFPVAO.I.C.G.H.G.
52.199.8191.6At4g33660829507unknown proteinF:unknown;P:unknown;C:unknown;MPOFBVAO.I.C.G.H.G.
51.699.8117.8At3g24100821996-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.C.G.H.G.
50.399.8160.0At5g07330830624unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
49.999.834.8At2g41170818716F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POO.I.C.G.H.G.
49.899.846.7At3g49160824077pyruvate kinase family proteinExpression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.O.I.C.G.H.G.
49.499.8132.1At2g077233768650-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
48.299.853.7At2g21940816730shikimate kinase, putativeF:shikimate kinase activity, ATP binding;P:unknown;C:unknown;BOFPMAO.I.C.G.H.G.
48.199.820.8At2g37440818321endonuclease/exonuclease/phosphatase family proteinF:hydrolase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:unknown;MPFOO.I.C.G.H.G.
47.799.890.2At3g17611821028ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14)F:zinc ion binding;P:biological_process unknown;C:integral to membrane, intracellular;BOPMFAVO.I.C.G.H.G.
47.699.875.1At1g51830841610ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAO.I.C.G.H.G.
46.699.810.5At5g15250831377FTSH6 (FTSH PROTEASE 6)Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation.O.I.C.G.H.G.
45.599.8295.3At3g23990821983HSP60 (HEAT SHOCK PROTEIN 60)mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.O.I.C.G.H.G.
45.299.8181.3At5g58590835973RANBP1 (RAN BINDING PROTEIN 1)Encodes a Ran-binding protein 1 homolog (RanBP1).O.I.C.G.H.G.
43.999.834.3At4g25380828641zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.
42.299.8161.9At5g53400835421nuclear movement family proteinF:unknown;P:unknown;C:cellular_component unknown;OMFBPAVO.I.C.G.H.G.
41.999.897.2At1g77000844036SKP2BAtSKP2;2 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes. AtSKP2b may also be involved in the degradation of KRP1/ICK1, a CDK inhibitor.O.I.C.G.H.G.
41.599.8145.9At2g07751815347NADH-ubiquinone oxidoreductase chain 3, putativeF:NADH dehydrogenase (ubiquinone) activity;P:mitochondrial electron transport, NADH to ubiquinone;C:endomembrane system;MOBPFAO.I.C.G.H.G.
40.799.825.5At1g10050837540glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing proteinEncodes a putative glycosyl hydrolase family 10 protein (xylanase).O.I.C.G.H.G.
40.599.8162.0At2g30000817551-F:unknown;P:unknown;C:cellular_component unknown;MFOPO.I.C.G.H.G.
40.599.8135.9At2g07722815395unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
40.499.883.5At4g02980828120ABP1 (ENDOPLASMIC RETICULUM AUXIN BINDING PROTEIN 1)auxin binding protein involved in cell elongation and cell divisionO.I.C.G.H.G.
40.399.854.2At3g04710819629ankyrin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MOBFPVAO.I.C.G.H.G.
40.199.8260.6At1g67360843057rubber elongation factor (REF) family proteinF:unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
39.599.8131.5At1g64200842725VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3)F:proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole, mitochondrial proton-transporting ATP synthase complex;MOFPABO.I.C.G.H.G.



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