Microarray experiments to specifically-expressed genes

GSM ID GSM131449
Assay name AtGen_6-9221_Heatstress-Roots-1.0h_Rep1
GSE experiment GSE5628: AtGenExpress: Stress Treatments (Heat stress)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
587.9100.0168.2At4g23493828448unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
439.2100.054.1At3g63350825510AT-HSFA7Bmember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
319.5100.0133.2At2g25140817052CLPB4 (CASEIN LYTIC PROTEINASE B4)Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.O.I.C.G.H.G.
313.6100.0428.9At2g46240819232BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6)A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.O.I.C.G.H.G.
311.8100.0140.8At3g08970820049ATERDJ3AJ domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.O.I.C.G.H.G.
301.1100.0315.6At5g3767083374615.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)F:molecular_function unknown;P:response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
284.1100.0290.3At4g21320827880HSA32 (HEAT-STRESS-ASSOCIATED 32)Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment.O.I.C.G.H.G.
272.7100.0332.3At1g5256084168726.5 kDa class I small heat shock protein-like (HSP26.5-P)F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:mitochondrion;BPOFAMVO.I.C.G.H.G.
265.0100.096.4At1g66080842922unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
250.2100.0370.6At2g32120817771HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2)F:ATP binding;P:protein folding, response to high light intensity, response to hydrogen peroxide, response to heat;C:cellular_component unknown;OBMFPAVO.I.C.G.H.G.
238.2100.0296.9At2g20560816578DNAJ heat shock family proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVO.I.C.G.H.G.
224.6100.0149.9At3g51910824354AT-HSFA7Amember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
211.5100.0210.2At5g35320833486unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
193.9100.0263.1At4g12400826849stress-inducible protein, putativeF:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAVO.I.C.G.H.G.
167.3100.0272.4At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMO.I.C.G.H.G.
155.599.9209.8At2g41160818715ubiquitin-associated (UBA)/TS-N domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;FMPOO.I.C.G.H.G.
151.999.9407.1At1g07350837246transformer serine/arginine-rich ribonucleoprotein, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:RNA splicing;C:unknown;MPFOBVAO.I.C.G.H.G.
149.099.9431.9At5g48570834913peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeF:FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding;P:protein folding;C:vacuole;BMOFPAO.I.C.G.H.G.
145.499.962.0At1g72660843598developmentally regulated GTP-binding protein, putativeF:GTP binding;P:unknown;C:intracellular;BOMAFPO.I.C.G.H.G.
143.799.9253.1At2g26150817155ATHSFA2member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.O.I.C.G.H.G.
140.099.9247.1At1g30070839886SGS domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFO.I.C.G.H.G.
138.899.9336.6At3g09350820091armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
132.399.9400.0At1g74310843771ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101)Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.O.I.C.G.H.G.
129.499.930.7At3g07150819901unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
125.099.9286.5At5g25450832619ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeF:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFOO.I.C.G.H.G.
118.999.9238.3At3g16050820850A37Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.O.I.C.G.H.G.
117.099.9345.4At1g5405084184317.4 kDa class III heat shock protein (HSP17.4-CIII)F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
116.199.9414.4At1g5354084178917.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMO.I.C.G.H.G.
112.299.9451.7At1g0740083725217.8 kDa class I heat shock protein (HSP17.8-CI)F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
112.199.9453.3At3g24500822041MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C)One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses.O.I.C.G.H.G.
110.299.9526.6At3g46230823768ATHSP17.4member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seedsO.I.C.G.H.G.
109.799.9318.1At2g47180819331AtGolS1 (Arabidopsis thaliana galactinol synthase 1)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBOO.I.C.G.H.G.
108.199.9406.1At2g2950081749917.6 kDa class I small heat shock protein (HSP17.6B-CI)F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
98.899.9241.8At5g12110831084elongation factor 1B alpha-subunit 1 (eEF1Balpha1)F:translation elongation factor activity;P:translational elongation;C:eukaryotic translation elongation factor 1 complex;MOPFO.I.C.G.H.G.
98.399.9258.8At4g25200828623ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrialO.I.C.G.H.G.
94.599.9417.9At5g12030831076AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.O.I.C.G.H.G.
90.299.9138.8At4g15420827213PRLI-interacting factor KF:peptidase activity, zinc ion binding;P:proteolysis, ubiquitin-dependent protein catabolic process;C:intracellular;MOFPBO.I.C.G.H.G.
89.799.9175.0At4g09150826496T-complex protein 11F:phosphopantetheine binding;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
87.499.9319.0At3g25230822117ROF1 (ROTAMASE FKBP 1)Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.O.I.C.G.H.G.
83.999.919.8At4g21323827881subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
81.899.9332.9At1g16030838174Hsp70b (heat shock protein 70B)F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVAO.I.C.G.H.G.
81.599.9148.2At1g03070839581glutamate bindingF:glutamate binding;P:biological_process unknown;C:cellular_component unknown;BOMPFVO.I.C.G.H.G.
80.399.9141.1At1g26800839223zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
77.699.9241.6At5g12020831075HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMO.I.C.G.H.G.
77.699.9115.0At3g17611821028ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14)F:zinc ion binding;P:biological_process unknown;C:integral to membrane, intracellular;BOPMFAVO.I.C.G.H.G.
77.599.9262.5At4g36990829853HSF4 (HEAT SHOCK FACTOR 4)encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.O.I.C.G.H.G.
73.799.970.6At3g09640820121APX2 (ASCORBATE PEROXIDASE 2)Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.O.I.C.G.H.G.
71.999.9439.7At5g52640835341ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.O.I.C.G.H.G.
69.899.943.2At4g25380828641zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.
68.499.929.4At2g38600818442acid phosphatase class B family proteinF:acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
68.099.970.4At3g04710819629ankyrin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MOBFPVAO.I.C.G.H.G.
65.999.893.4At5g58787835995zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.
63.999.8251.0At5g09590830818MTHSC70-2 (MITOCHONDRIAL HSP70 2)heat shock protein 70 (Hsc70-5); nuclearO.I.C.G.H.G.
57.499.8123.9At1g14200837980zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBO.I.C.G.H.G.
57.499.8113.7At4g26270828733PFK3 (PHOSPHOFRUCTOKINASE 3)F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex;BOMFPAVO.I.C.G.H.G.
57.199.8138.7At2g01150814644RHA2B (RING-H2 FINGER PROTEIN 2B)Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.O.I.C.G.H.G.
56.899.8404.1At3g10020820163unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;PMO.I.C.G.H.G.
52.999.880.2At3g14200820637DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
51.499.8133.5At4g27670828881HSP21 (HEAT SHOCK PROTEIN 21)chloroplast located small heat shock protein.O.I.C.G.H.G.
51.199.875.9At5g47830834834unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
50.099.8357.6At3g12050820379Aha1 domain-containing proteinF:ATPase activator activity, chaperone binding;P:response to stress;C:cytoplasm;MFOPBO.I.C.G.H.G.
49.499.8180.5At4g10250826616ATHSP22.0Columbia endomembrane-localized small heat shock proteinO.I.C.G.H.G.
48.099.829.0At1g66510842969AAR2 protein familyF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBO.I.C.G.H.G.
47.499.8308.1At3g07090819895unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
46.299.8279.8At1g67360843057rubber elongation factor (REF) family proteinF:unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
45.599.8178.9At4g33660829507unknown proteinF:unknown;P:unknown;C:unknown;MPOFBVAO.I.C.G.H.G.
44.799.8252.8At5g15450831398CLPB3 (CASEIN LYTIC PROTEINASE B3)Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.O.I.C.G.H.G.
43.199.8496.9At3g12580820438HSP70 (heat shock protein 70)F:ATP binding;P:in 8 processes;C:cytosol, mitochondrion, cell wall, plasma membrane;OBMFPVAO.I.C.G.H.G.
41.699.8188.1At5g59720836093HSP18.2 (heat shock protein 18.2)encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.O.I.C.G.H.G.
40.099.884.7At3g03520821244phosphoesterase family proteinF:hydrolase activity, acting on ester bonds;P:biological_process unknown;C:vacuole, membrane;BFPOAO.I.C.G.H.G.
39.499.8124.7At5g64510836572unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
37.599.784.4At5g03340831870cell division cycle protein 48, putative / CDC48, putativeF:in 6 functions;P:unknown;C:cell wall;BOMFPAVO.I.C.G.H.G.
37.599.718.4At2g37440818321endonuclease/exonuclease/phosphatase family proteinF:hydrolase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:unknown;MPFOO.I.C.G.H.G.
36.699.7115.1At1g09140837433SF2/ASF-like splicing modulator (SRP30)Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.O.I.C.G.H.G.
35.799.7140.4At3g53230824489cell division cycle protein 48, putative / CDC48, putativeF:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAVO.I.C.G.H.G.
34.299.766.2At5g62020836322AT-HSFB2Amember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
33.599.7121.1At1g64200842725VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3)F:proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole, mitochondrial proton-transporting ATP synthase complex;MOFPABO.I.C.G.H.G.
32.999.728.2At2g41170818716F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POO.I.C.G.H.G.
32.599.721.5At1g35660840468unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFBO.I.C.G.H.G.
32.199.7159.2At1g55530842000zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVBO.I.C.G.H.G.
31.899.722.6At1g10050837540glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing proteinEncodes a putative glycosyl hydrolase family 10 protein (xylanase).O.I.C.G.H.G.
31.599.728.2At4g11660826771AT-HSFB2Bmember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
29.999.7105.9At1g18330838413EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1)EARLY-PHYTOCHROME-RESPONSIVE1O.I.C.G.H.G.
29.399.741.9At2g21940816730shikimate kinase, putativeF:shikimate kinase activity, ATP binding;P:unknown;C:unknown;BOFPMAO.I.C.G.H.G.
29.199.748.6At5g57100835814transporter-relatedF:unknown;P:unknown;C:membrane;PMFOBO.I.C.G.H.G.
28.999.775.9At1g17870838366EGY3 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3)S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.O.I.C.G.H.G.
28.799.730.8At5g23380832402unknown proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;POO.I.C.G.H.G.
28.499.7233.4At3g23990821983HSP60 (HEAT SHOCK PROTEIN 60)mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.O.I.C.G.H.G.
28.399.7143.5At5g58590835973RANBP1 (RAN BINDING PROTEIN 1)Encodes a Ran-binding protein 1 homolog (RanBP1).O.I.C.G.H.G.
26.999.789.2At4g29330829054DER1 (DERLIN-1)F:molecular_function unknown;P:proteolysis;C:cellular_component unknown;MOFPBO.I.C.G.H.G.
26.899.757.3At2g24100816944unknown proteinF:molecular_function unknown;P:unknown;C:unknown;POO.I.C.G.H.G.
26.799.7140.8At2g19310816448-F:molecular_function unknown;P:response to oxidative stress, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;PFOO.I.C.G.H.G.
26.799.732.3At1g11100837651SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-relatedF:in 6 functions;P:unknown;C:unknown;MBFOPVAO.I.C.G.H.G.
26.499.722.2At1g58170842184disease resistance-responsive protein-related / dirigent protein-relatedF:molecular_function unknown;P:N-terminal protein myristoylation, lignan biosynthetic process, defense response;C:endomembrane system;PO.I.C.G.H.G.
25.099.613.6At2g01430814671ATHB17 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17)F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOVO.I.C.G.H.G.
24.499.616.8At4g17250827439unknown proteinF:molecular_function unknown;P:heat acclimation;C:cellular_component unknown;PO.I.C.G.H.G.
24.299.614.7At1g44414841028unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
23.799.6121.5At5g53400835421nuclear movement family proteinF:unknown;P:unknown;C:cellular_component unknown;OMFBPAVO.I.C.G.H.G.
22.999.6104.5At5g11680831040unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, plasma membrane;MOFPO.I.C.G.H.G.
21.799.654.9At5g19875832109unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;PO.I.C.G.H.G.



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