Microarray experiments to specifically-expressed genes

GSM ID GSM131400
Assay name AtGen_6-7412_UV-Bstress-Shoots-6.0h_Rep2
GSE experiment GSE5626: AtGenExpress: Stress Treatments (UV-B stress)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
157.199.998.1At2g04070814943antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:transport, multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
77.799.9145.3At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.O.I.C.G.H.G.
50.299.890.5At2g04050814939MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
46.399.840.7At1g32960840190SBT3.3F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast, plant-type cell wall;BPOAFMO.I.C.G.H.G.
42.999.887.2At1g71330843474ATNAP5member of NAP subfamilyO.I.C.G.H.G.
41.399.8204.7At3g26830822298PAD3 (PHYTOALEXIN DEFICIENT 3)Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.O.I.C.G.H.G.
41.299.8223.3At2g18660816381EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.O.I.C.G.H.G.
40.599.815.2At3g21780821732UGT71B6 (UDP-glucosyl transferase 71B6)Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates.O.I.C.G.H.G.
32.299.7142.6At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseO.I.C.G.H.G.
29.999.729.0At5g55420835635-Encodes a Protease inhibitor/seed storage/LTP family protein [pseudogene]O.I.C.G.H.G.
29.599.7152.6At1g05680837075UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
29.599.725.2At5g22530832314unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
29.299.721.8At1g21240838719WAK3 (wall associated kinase 3)encodes a wall-associated kinaseO.I.C.G.H.G.
28.599.784.7At2g29460817495ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
28.499.724.2At2g18190816332AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:response to salt stress;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
26.399.752.8At1g19250838508FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)FMO1 is required for full expression of TIR-NB-LRR–conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.O.I.C.G.H.G.
26.099.754.7At3g48090823964EDS1 (enhanced disease susceptibility 1)Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.O.I.C.G.H.G.
23.299.669.1At2g18680816383unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
22.599.6117.9At3g49620824124DIN11 (DARK INDUCIBLE 11)encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.O.I.C.G.H.G.
22.599.666.9At3g47480823902calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOBO.I.C.G.H.G.
21.199.688.1At2g30770817628CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13)putative cytochrome P450O.I.C.G.H.G.
20.699.6118.4At4g25200828623ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrialO.I.C.G.H.G.
19.299.626.7At1g33030840198O-methyltransferase family 2 proteinF:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOMO.I.C.G.H.G.
18.699.516.7At4g04220825737AtRLP46 (Receptor Like Protein 46)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
17.999.560.2At4g11890826796protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.C.G.H.G.
17.399.539.6At1g03660839033-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
17.299.532.8At4g16890827397SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1)Encodes a Toll Interleukin1 receptor-nucleotide binding-Leu- rich repeat-type resistance gene (TIR-NB-LRR-type) involved in the salicylic acid-dependent defense response pathway. Mutant plants constitutively express pathogenesis-related (PR) genes and are pathogen resistant. Resistance signaling in snc1 requires EDS1, MOS3 and PAD4.O.I.C.G.H.G.
17.099.527.2At3g23110821886AtRLP37 (Receptor Like Protein 37)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
16.799.5190.4At3g54640824629TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).O.I.C.G.H.G.
16.499.521.4At3g05360819700AtRLP30 (Receptor Like Protein 30)F:protein binding, kinase activity;P:defense response signaling pathway, resistance gene-independent, response to cyclopentenone, signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
15.999.542.3At1g69730843309protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVAO.I.C.G.H.G.
15.799.555.2At3g28930822529AIG2 (AVRRPT2-INDUCED GENE 2)avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2O.I.C.G.H.G.
15.399.478.7At4g27830828896BGLU10 (BETA GLUCOSIDASE 10)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:vacuole;BOPMFAO.I.C.G.H.G.
15.299.436.2At4g03450827913ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPFBVAO.I.C.G.H.G.
15.099.453.9At3g48850824046mitochondrial phosphate transporter, putativeF:binding;P:transport;C:mitochondrial inner membrane, chloroplast, membrane;MFPOO.I.C.G.H.G.
14.999.4115.3At2g03760814903STEncodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.O.I.C.G.H.G.
14.799.459.3At5g62480836368ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
14.299.4143.4At2g38860818470YLS5Encodes protease I (pfpI)-like protein YLS5.O.I.C.G.H.G.
14.299.481.1At1g57630842139disease resistance protein (TIR class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
14.199.4102.1At2g26440817184pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
13.999.486.3At3g14620820690CYP72A8putative cytochrome P450O.I.C.G.H.G.
13.699.470.4At4g27585828868band 7 family proteinF:unknown;P:biological_process unknown;C:mitochondrion, plastid, membrane;BOMPAFVO.I.C.G.H.G.
12.599.3156.3At2g04400814980indole-3-glycerol phosphate synthase (IGPS)F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFPO.I.C.G.H.G.
12.599.3113.8At5g59540836073oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
12.499.3146.7At5g17990831666TRP1 (tryptophan biosynthesis 1)Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.O.I.C.G.H.G.
12.399.356.7At1g21270838723WAK2cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.O.I.C.G.H.G.
11.999.39.2At1g71530843493protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:chloroplast;MPOFBVAO.I.C.G.H.G.
11.899.339.0At5g61010836222ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
11.899.325.9At1g26420839184FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAO.I.C.G.H.G.
11.799.310.8At4g11840826790PLDGAMMA3member of C2-PLD subfamilyO.I.C.G.H.G.
11.499.333.9At3g11010820272AtRLP34 (Receptor Like Protein 34)F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAVO.I.C.G.H.G.
11.499.39.6At2g36750818247UGT73C1 (UDP-GLUCOSYL TRANSFERASE 73C1)F:cis-zeatin O-beta-D-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, trans-zeatin O-beta-D-glucosyltransferase activity;P:response to UV-B;C:unknown;PMVBOFO.I.C.G.H.G.
11.199.235.5At2g29990817549NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2)F:NADH dehydrogenase activity, oxidoreductase activity, FAD binding;P:unknown;C:intrinsic to mitochondrial inner membrane;BOFPAMO.I.C.G.H.G.
11.099.284.1At3g60190825189ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E)At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ‘dynamin 2‘ domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.O.I.C.G.H.G.
10.899.269.2At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMO.I.C.G.H.G.
10.899.248.5At1g66880843006serine/threonine protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
10.899.239.1At5g49570835019AtPNG1 (Arabidopsis thaliana peptide-N-glycanase 1)Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).O.I.C.G.H.G.
10.899.226.0At2g41880818788GK-1 (GUANYLATE KINASE 1)Guanylate kinase. Involved in nucleotide metabolism.O.I.C.G.H.G.
10.499.265.4At1g15520838122PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots.O.I.C.G.H.G.
10.399.242.6At4g08470826406MAPKKK10member of MEKK subfamilyO.I.C.G.H.G.
10.199.282.3At1g43910840990AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
10.199.216.2At1g67520843073lectin protein kinase family proteinF:in 7 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
10.099.2154.7At2g18690816384unknown proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PBO.I.C.G.H.G.
10.099.283.7At4g05020825844NDB2 (NAD(P)H dehydrogenase B2)F:disulfide oxidoreductase activity, oxidoreductase activity, FAD binding;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion;BOFPAMO.I.C.G.H.G.
9.999.144.6At5g38900833882DSBA oxidoreductase family proteinF:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMAO.I.C.G.H.G.
9.899.19.9At4g38560830013-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBAFVO.I.C.G.H.G.
9.699.111.7At5g67310836866CYP81G1member of CYP81GO.I.C.G.H.G.
9.599.1168.9At3g56400824807WRKY70member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.O.I.C.G.H.G.
9.599.147.2At5g17760831644AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:unknown;C:plasma membrane;BOMFPAVO.I.C.G.H.G.
9.599.128.3At1g11330837675S-locus lectin protein kinase family proteinF:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
9.599.127.7At4g23260828425ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:response to abscisic acid stimulus;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
9.599.123.2At4g04500825780protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
9.499.1193.1At3g085908200062,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putativeF:manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding;P:response to cadmium ion;C:cytosol, apoplast;BOPFAMO.I.C.G.H.G.
9.499.1157.7At1g21250838721WAK1 (CELL WALL-ASSOCIATED KINASE)cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component.O.I.C.G.H.G.
9.499.144.4At4g17720827493RNA recognition motif (RRM)-containing proteinF:oxidoreductase activity, nucleotide binding, nucleic acid binding;P:oxidation reduction;C:unknown;POFMBVAO.I.C.G.H.G.
9.499.142.3At5g50160835081FRO8 (FERRIC REDUCTION OXIDASE 8)Encodes a ferric chelate reductase that is expressed in shoots and flowers.O.I.C.G.H.G.
9.399.170.5At1g35710840475leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
9.299.1119.5At4g39950830154CYP79B2Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.O.I.C.G.H.G.
9.299.194.4At1g24807839085anthranilate synthase beta subunit, putativeF:catalytic activity, anthranilate synthase activity;P:glutamine metabolic process, biosynthetic process, metabolic process;C:chloroplast;BOFAMPO.I.C.G.H.G.
9.299.131.1At4g22530828348embryo-abundant protein-relatedF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOAO.I.C.G.H.G.
9.299.129.7At5g434408343642-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseO.I.C.G.H.G.
9.299.120.0At4g04490825779protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
9.199.1115.3At3g18830821416ATPLT5 (POLYOL TRANSPORTER 5)This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The AtPLT5 symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.O.I.C.G.H.G.
9.099.1130.3At2g41730818772unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
9.099.1126.7At5g17380831604pyruvate decarboxylase family proteinF:pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity;P:unknown;C:cellular_component unknown;OBFPAMVO.I.C.G.H.G.
8.799.0231.3At3g16530820901legume lectin family proteinLectin like protein whose expression is induced upon treatment with chitin oligomers.O.I.C.G.H.G.
8.799.037.8At2g29720817522CTF2BEncodes CTF2B.O.I.C.G.H.G.



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