Microarray experiments to specifically-expressed genes

GSM ID GSM131346
Assay name AtGen_6-4322_Droughtstress-Roots-3.0h_Rep2
GSE experiment GSE5624: AtGenExpress: Stress Treatments (Drought stress)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
139.799.9128.9At2g29870817537major intrinsic family protein / MIP family proteinF:water channel activity;P:transport;C:membrane;BPMOFAO.I.C.G.H.G.
92.799.9316.2At3g43190823393SUS4Encodes a protein with sucrose synthase activity (SUS4).O.I.C.G.H.G.
59.699.894.1At5g10040830868unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
44.199.868.7At4g24110828511unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
43.699.861.9At3g10040820165transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVAO.I.C.G.H.G.
36.799.715.4At3g62740825449BGLU7 (BETA GLUCOSIDASE 7)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAO.I.C.G.H.G.
35.799.7287.7At4g33070829444pyruvate decarboxylase, putativeF:in 6 functions;P:unknown;C:membrane;BOFPAMVO.I.C.G.H.G.
34.699.7175.2At1g33055840201unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
34.199.7151.1At5g66985836833unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
33.099.781.1At1g72360843568ethylene-responsive element-binding protein, putativeencodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.O.I.C.G.H.G.
32.799.7152.1At1g43800840977acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeF:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOMO.I.C.G.H.G.
30.299.79.0At3g50190824181unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;POO.I.C.G.H.G.
29.099.7293.7At5g20830832206SUS1 (SUCROSE SYNTHASE 1)Encodes a protein with sucrose synthase activity (SUS1).O.I.C.G.H.G.
27.899.757.3At1g51830841610ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAO.I.C.G.H.G.
27.199.715.8At4g19980827742unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
26.799.744.0At4g13290826959CYP71A19putative cytochrome P450O.I.C.G.H.G.
26.499.719.0At1g51840841611protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
26.099.781.6At2g17850816295-F:molecular_function unknown;P:aging;C:endomembrane system;BOPAMFO.I.C.G.H.G.
25.899.718.5At3g60490825220AP2 domain-containing transcription factor TINY, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.O.I.C.G.H.G.
24.499.669.5At5g11920831065AtcwINV6 (6-&1-fructan exohydrolase)Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity.O.I.C.G.H.G.
24.499.650.2At4g31730829301GDU1 (GLUTAMINE DUMPER 1)Glutamine dumper1 is a putative transmembrane protein. It is involved in glutamine secretionO.I.C.G.H.G.
24.499.634.3At2g47950819407unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
24.099.621.1At4g11880826795AGL14 (agamous-like 14)AGL12, AGL14, and AGL17 are all preferentially expressed in root tissues and therefore represent the only characterized MADS box genes expressed in roots.O.I.C.G.H.G.
23.899.689.5At2g19590816478ACO1 (ACC OXIDASE 1)encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidaseO.I.C.G.H.G.
23.199.610.5At3g12220820402scpl16 (serine carboxypeptidase-like 16)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOO.I.C.G.H.G.
22.799.6204.0At4g39675830122unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
22.699.670.8At1g35670840471ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.O.I.C.G.H.G.
21.499.676.5At2g46750819288FAD-binding domain-containing proteinF:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOPFMAO.I.C.G.H.G.
21.299.6288.8At2g26400817180ATARD3 (ACIREDUCTONE DIOXYGENASE 3)Encodes a protein predicted to belong to the acireductone dioxygenase (ARD/ARDí)family.O.I.C.G.H.G.
20.499.6583.9At1g77120844047ADH1 (ALCOHOL DEHYDROGENASE 1)Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.O.I.C.G.H.G.
20.499.6170.6At5g37740833752C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOO.I.C.G.H.G.
20.299.618.9At5g67430836879GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PBAO.I.C.G.H.G.
20.099.691.7At5g39890833986unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
20.099.631.4At1g10990837642unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
19.799.628.8At5g48940834952leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.C.G.H.G.
19.699.651.8At4g33560829495unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
19.499.687.4At1g80240844364unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PBO.I.C.G.H.G.
18.999.5104.4At1g22440838850alcohol dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAVO.I.C.G.H.G.
18.499.594.5At1g10140837551-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POO.I.C.G.H.G.
17.999.5358.6At1g11580837701PMEPCRA (METHYLESTERASE PCR A)F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plasma membrane, plant-type cell wall;PBFMOO.I.C.G.H.G.
17.899.558.6At2g41480818746electron carrier/ heme binding / peroxidaseF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBMO.I.C.G.H.G.
17.799.518.4At5g42630834270ATS (ABERRANT TESTA SHAPE)Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.O.I.C.G.H.G.
17.699.582.7At2g30500817600kinase interacting family proteinF:unknown;P:unknown;C:unknown;MOBFPAVO.I.C.G.H.G.
17.399.5199.4At1g76790844013O-methyltransferase family 2 proteinF:methyltransferase activity, O-methyltransferase activity, protein dimerization activity;P:unknown;C:cytosol;PBFOMO.I.C.G.H.G.
17.399.532.8At5g66700836803HB53Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development.O.I.C.G.H.G.
16.899.5152.7At3g02550821112LBD41 (LOB DOMAIN-CONTAINING PROTEIN 41)F:unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.799.527.1At5g12480831123CPK7 (calmodulin-domain protein kinase 7)calmodulin-domain protein kinase CDPK isoform 7 (CPK7)O.I.C.G.H.G.
16.699.513.0At2g47560819369zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
16.499.540.0At2g23030816833SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9)encodes a member of SNF1-related protein kinases (SnRK2)O.I.C.G.H.G.
16.099.525.5At5g22890832353zinc finger (C2H2 type) family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:intracellular;MOPFO.I.C.G.H.G.
15.899.5190.5At1g19530838540unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.C.G.H.G.
15.799.515.8At4g40070830170protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
15.399.4258.3At2g16060816103AHB1 (ARABIDOPSIS HEMOGLOBIN 1)Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen.O.I.C.G.H.G.
15.399.441.2At2g47520819365AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.O.I.C.G.H.G.
15.399.434.4At3g27220822341kelch repeat-containing proteinF:unknown;P:biological_process unknown;C:Golgi apparatus;MBOVPFAO.I.C.G.H.G.
15.299.479.0At5g50760835148auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
15.199.468.0At3g29970822700germination protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
15.099.440.2At2g46740819287FAD-binding domain-containing proteinF:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BOFPMAO.I.C.G.H.G.
14.999.4210.1At5g06860830577PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1)Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection.O.I.C.G.H.G.
14.999.490.5At2g22330816765CYP79B3Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.O.I.C.G.H.G.
14.999.453.4At5g60890836210MYB34 (MYB DOMAIN PROTEIN 34)Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis.O.I.C.G.H.G.
14.899.487.4At4g12080826816DNA-binding family proteinF:DNA binding;P:unknown;C:mitochondrion, nucleolus, nucleus, cytoplasm;PMFOBVO.I.C.G.H.G.
14.799.451.8At5g44730834502haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:endomembrane system;BMAOFPO.I.C.G.H.G.
14.699.4118.8At5g59520836071ZIP2encodes a metal ion transporter whose expression is regulated by copper.O.I.C.G.H.G.
14.199.429.1At2g29330817482TRI (tropinone reductase)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAVO.I.C.G.H.G.
14.099.464.2At5g37990833778S-adenosylmethionine-dependent methyltransferase/ methyltransferaseF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:endomembrane system;POBMFO.I.C.G.H.G.
13.999.444.6At2g19580816477TET2 (TETRASPANIN2)Member of TETRASPANIN familyO.I.C.G.H.G.
13.999.430.8At1g52140841644unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
13.799.460.9At1g55810842031uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putativeF:uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding;P:biosynthetic process, metabolic process;C:cellular_component unknown;BOMPFAVO.I.C.G.H.G.
13.699.4139.8At5g23830832448MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
13.599.4186.1At2g43610818963glycoside hydrolase family 19 proteinF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:plasma membrane;PBFOVMO.I.C.G.H.G.
13.599.4105.4At1g55020841944LOX1lipoxygenase, a defense gene conferring resistance Xanthomonas campestrisO.I.C.G.H.G.
13.499.4293.0At2g31390817697pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:plasma membrane;BOPAMFO.I.C.G.H.G.
13.499.4142.2At3g13310820531DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMFPAVO.I.C.G.H.G.
13.499.432.9At1g60610842355protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.
13.499.430.9At1g02220839476ANAC003 (Arabidopsis NAC domain containing protein 3)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PFO.I.C.G.H.G.
13.399.4320.1At4g37410829895CYP81F4member of CYP81FO.I.C.G.H.G.
13.099.4294.2At4g27450828854unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;PBOMFO.I.C.G.H.G.
13.099.423.1At3g04570819613DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:unknown;BPMOFVAO.I.C.G.H.G.
12.999.3114.2At4g10270826619wound-responsive family proteinF:molecular_function unknown;P:response to wounding;C:unknown;PO.I.C.G.H.G.
12.999.317.1At4g13280826958TPS12 (TERPENOID SYNTHASE 12)Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding.O.I.C.G.H.G.
12.899.345.6At5g65280836653GCL1 (GCR2-LIKE 1)Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.O.I.C.G.H.G.
12.899.310.0At2g48090819421unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
12.699.392.1At5g18170831935GDH1 (GLUTAMATE DEHYDROGENASE 1)Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.O.I.C.G.H.G.
12.499.343.0At5g63560836475transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
12.499.328.6At2g21560816695unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVO.I.C.G.H.G.
12.499.324.4At5g092908307883'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeF:3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity;P:sulfur metabolic process;C:unknown;BOMFPAO.I.C.G.H.G.
12.299.373.2At1g26270839168phosphatidylinositol 3- and 4-kinase family proteinF:inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor;P:unknown;C:cellular_component unknown;MPOFBO.I.C.G.H.G.
12.199.334.9At1g26440839185ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5)uptake assays in a yeast mutant indicated this splice variant is not a cellular importer for allantoin, uracil or xanthineO.I.C.G.H.G.
12.199.334.4At3g12230820403scpl14 (serine carboxypeptidase-like 14)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBO.I.C.G.H.G.
12.099.3278.8At5g01870831705lipid transfer protein, putativePredicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.O.I.C.G.H.G.
12.099.390.5At5g15120831364unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
12.099.366.5At5g65640836690bHLH093 (beta HLH protein 93)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOO.I.C.G.H.G.
12.099.352.3At3g26470822252-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.999.385.1At4g36430829795peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to other organism;C:cell wall;PFOBMO.I.C.G.H.G.
11.999.326.7At2g25590817098agenet domain-containing proteinF:RNA binding;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
11.899.321.9At1g35260840415MLP165 (MLP-LIKE PROTEIN 165)F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
11.799.391.8At4g38470830003protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation, metabolic process;C:cytosol;MPOBFVAO.I.C.G.H.G.
11.799.336.6At4g08780826448peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFMO.I.C.G.H.G.
11.699.345.7At3g24240822011leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.



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