CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM131279

Assay name AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1

GSE experiment GSE5621: AtGenExpress: Stress Treatments (Cold stress)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
350.7 100.0 174.7 At3g17130 820970 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
323.4 100.0 402.9 At1g09350 837457 AtGolS3 (Arabidopsis thaliana galactinol synthase 3) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO O.I. C.G. H.G.
271.1 100.0 72.1 At3g55580 824723 regulator of chromosome condensation (RCC1) family protein F:binding;P:biological_process unknown;C:cellular_component unknown;MOBPFAV O.I. C.G. H.G.
207.1 100.0 207.6 At4g32190 829352 centromeric protein-related F:unknown;P:unknown;C:unknown;MOBFPAV O.I. C.G. H.G.
202.2 100.0 164.7 At1g48100 841228 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBOMVA O.I. C.G. H.G.
176.4 100.0 254.0 At1g16850 838256 unknown protein F:molecular_function unknown;P:response to salt stress;C:endomembrane system;P O.I. C.G. H.G.
156.4 99.9 210.9 At1g51090 841532 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMVF O.I. C.G. H.G.
116.7 99.9 180.2 At3g16800 820933 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, cytoplasm;PMOFV O.I. C.G. H.G.
115.6 99.9 239.6 At4g27560 828865 glycosyltransferase family protein F:transferase activity, transferring glycosyl groups;P:response to salt stress, N-terminal protein myristoylation;C:cellular_component unknown;PMBFOV O.I. C.G. H.G.
95.7 99.9 52.8 At5g54470 835535 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POFM O.I. C.G. H.G.
89.3 99.9 146.0 At1g11210 837662 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;PO O.I. C.G. H.G.
88.7 99.9 43.1 At1g46768 841117 RAP2.1 (related to AP2 1) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10. O.I. C.G. H.G.
87.6 99.9 182.9 At1g60190 842314 armadillo/beta-catenin repeat family protein / U-box domain-containing protein F:ubiquitin-protein ligase activity, protein binding, binding, zinc ion binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVA O.I. C.G. H.G.
83.7 99.9 116.6 At4g17550 827470 transporter-related F:sugar:hydrogen symporter activity;P:carbohydrate transport;C:plasma membrane;BMFOPA O.I. C.G. H.G.
75.4 99.9 60.1 At3g01210 821275 nucleic acid binding / oxidoreductase F:oxidoreductase activity, nucleic acid binding;P:oxidation reduction;C:cellular_component unknown;PFOM O.I. C.G. H.G.
72.2 99.9 258.0 At5g06760 830565 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy, embryonic development;C:cellular_component unknown;PMBOFV O.I. C.G. H.G.
65.0 99.8 81.4 At1g20030 838592 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOV O.I. C.G. H.G.
62.8 99.8 256.1 At4g38580 830015 ATFP6 (FARNESYLATED PROTEIN 6) putative farnesylated protein (At4g38580) mRNA, complete O.I. C.G. H.G.
60.9 99.8 80.8 At4g12000 826807 - F:unknown;P:response to oxidative stress;C:unknown;BOPMFA O.I. C.G. H.G.
58.5 99.8 117.6 At1g64890 842797 integral membrane transporter family protein F:transporter activity;P:transport;C:membrane;BOPMAF O.I. C.G. H.G.
57.3 99.8 90.0 At1g21790 838783 - F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MPO O.I. C.G. H.G.
53.9 99.8 146.9 At5g15850 831442 COL1 (constans-like 1) Homologous to the flowering-time gene CONSTANS. O.I. C.G. H.G.
53.4 99.8 547.8 At4g17090 827419 CT-BMY (CHLOROPLAST BETA-AMYLASE) Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected). O.I. C.G. H.G.
52.4 99.8 247.5 At1g80130 844353 binding F:binding;P:response to oxidative stress;C:membrane;BPOMFAV O.I. C.G. H.G.
51.3 99.8 60.1 At1g32860 840180 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;POF O.I. C.G. H.G.
51.3 99.8 24.9 At4g34650 829617 SQS2 (SQUALENE SYNTHASE 2) Encodes a protein with similarity to squalene synthase which catalyzes the first committed step in sterol biosynthesis. To date no experimental evidence exists that SQS2 functions as a squalene synthase and some experiments indicate it does not have this function. O.I. C.G. H.G.
51.2 99.8 113.6 At1g68500 843179 unknown protein F:unknown;P:unknown;C:cellular_component unknown;P O.I. C.G. H.G.
47.7 99.8 80.3 At3g24520 822047 AT-HSFC1 member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
46.9 99.8 114.3 At1g10410 837581 - F:unknown;P:N-terminal protein myristoylation;C:chloroplast;POMF O.I. C.G. H.G.
46.1 99.8 216.8 At1g62570 842554 FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates O.I. C.G. H.G.
44.8 99.8 196.2 At1g02820 839304 late embryogenesis abundant 3 family protein / LEA3 family protein F:molecular_function unknown;P:embryonic development, response to stress;C:unknown;P O.I. C.G. H.G.
44.7 99.8 66.5 At3g14890 820718 phosphoesterase F:DNA binding, catalytic activity, zinc ion binding;P:unknown;C:unknown;MOFPVBA O.I. C.G. H.G.
42.9 99.8 161.8 At5g57110 835815 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane. O.I. C.G. H.G.
42.5 99.8 47.7 At1g11960 837748 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;FPMOB O.I. C.G. H.G.
41.5 99.8 134.2 At3g61890 825362 ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems. O.I. C.G. H.G.
41.5 99.8 74.0 At1g10090 837544 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FPMO O.I. C.G. H.G.
40.7 99.8 244.4 At4g24960 828598 ATHVA22D Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development. O.I. C.G. H.G.
40.3 99.8 78.3 At1g78070 844142 - F:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;PFO O.I. C.G. H.G.
39.6 99.8 60.2 At4g27940 828907 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO O.I. C.G. H.G.
38.8 99.8 68.1 At5g07920 830686 DGK1 (DIACYLGLYCEROL KINASE1) diacylglycerol kinase O.I. C.G. H.G.
38.5 99.8 114.8 At3g51895 824353 SULTR3 Encodes a sulfate transporter. O.I. C.G. H.G.
38.3 99.8 620.8 At3g50970 824261 LTI30 (LOW TEMPERATURE-INDUCED 30) Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid. O.I. C.G. H.G.
37.0 99.7 177.6 At5g40390 834037 SIP1 (seed imbibition 1-like) Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged. O.I. C.G. H.G.
35.1 99.7 163.8 At1g73480 843683 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOPMFVA O.I. C.G. H.G.
34.7 99.7 323.3 At2g17840 816293 ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7) Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis. O.I. C.G. H.G.
34.5 99.7 320.5 At5g20830 832206 SUS1 (SUCROSE SYNTHASE 1) Encodes a protein with sucrose synthase activity (SUS1). O.I. C.G. H.G.
33.9 99.7 45.5 At5g05220 830404 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
33.4 99.7 19.8 At4g30830 829207 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFBPAV O.I. C.G. H.G.
33.3 99.7 307.8 At5g55180 835611 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO O.I. C.G. H.G.
32.2 99.7 50.3 At1g08890 837410 sugar transporter family protein F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:chloroplast, membrane;MFBPOA O.I. C.G. H.G.
32.1 99.7 107.7 At5g42570 834264 - F:molecular_function unknown;P:intracellular protein transport;C:endoplasmic reticulum, plasma membrane;MPOFAB O.I. C.G. H.G.
31.5 99.7 41.8 At1g27200 839609 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BPOFM O.I. C.G. H.G.
31.3 99.7 18.0 At2g42150 818815 DNA-binding bromodomain-containing protein F:DNA binding;P:unknown;C:nucleus;MOFPBV O.I. C.G. H.G.
31.0 99.7 57.2 At4g27820 828895 BGLU9 (BETA GLUCOSIDASE 9) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:peroxisome;BOPMFA O.I. C.G. H.G.
30.8 99.7 303.4 At3g49220 824083 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
30.0 99.7 59.1 At1g67850 843111 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
29.5 99.7 111.7 At3g11670 820339 DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE). O.I. C.G. H.G.
29.5 99.7 67.3 At5g14760 831328 AO (L-ASPARTATE OXIDASE) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2 O.I. C.G. H.G.
29.5 99.7 45.5 At4g23920 828492 UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2) Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in growth and cell wall carbohydrate biosynthesis. O.I. C.G. H.G.
29.4 99.7 129.5 At2g46830 819296 CCA1 (CIRCADIAN CLOCK ASSOCIATED 1) Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. O.I. C.G. H.G.
29.0 99.7 159.3 At5g15950 831452 adenosylmethionine decarboxylase family protein F:adenosylmethionine decarboxylase activity;P:spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
28.3 99.7 99.9 At5g42900 834301 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
27.8 99.7 52.2 At5g61810 836303 mitochondrial substrate carrier family protein F:binding, calcium ion binding;P:transport;C:mitochondrial inner membrane, membrane;MFPOBV O.I. C.G. H.G.
27.7 99.7 50.8 At4g15130 827179 catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferase F:choline-phosphate cytidylyltransferase activity, catalytic activity, nucleotidyltransferase activity;P:response to cold, biosynthetic process;C:unknown;OMBFPA O.I. C.G. H.G.
27.6 99.7 451.6 At5g52310 835307 LTI78 (LOW-TEMPERATURE-INDUCED 78) cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression O.I. C.G. H.G.
26.9 99.7 164.1 At1g47710 841182 serpin, putative / serine protease inhibitor, putative F:serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity;P:biological_process unknown;C:apoplast;MVPBOAF O.I. C.G. H.G.
26.6 99.7 195.3 At1g71950 843526 identical protein binding / serine-type endopeptidase F:identical protein binding, serine-type endopeptidase activity;P:negative regulation of catalytic activity;C:plasma membrane;P O.I. C.G. H.G.
25.8 99.7 104.3 At4g18280 827554 glycine-rich cell wall protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
25.8 99.7 16.1 At2g24560 816992 carboxylesterase/ hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
25.5 99.7 21.7 At5g61370 836258 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POFMA O.I. C.G. H.G.
25.3 99.6 160.8 At5g52300 835306 LTI65 (LOW-TEMPERATURE-INDUCED 65) encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi. O.I. C.G. H.G.
23.9 99.6 16.7 At1g25250 839108 AtIDD16 (Arabidopsis thaliana Indeterminate(ID)-Domain 16) F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPFBVA O.I. C.G. H.G.
23.5 99.6 461.1 At2g28900 817439 ATOEP16-1 (OUTER PLASTID ENVELOPE PROTEIN 16-1) Encodes AtOEP16, a 16-KDa plastid outer membrane protein involved in plastid import of protochlorophyllide oxidoreductase A. Predominantly expressed in leaves and is also inducible by cold treatment. O.I. C.G. H.G.
23.4 99.6 254.7 At2g39800 818566 P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. P5CS1 appears to be involved in salt stress responses related to proline accumulation, including protection from reactive oxidative species. P5CS1 appears to be present in different cells and/or different subcellular locations from P5CS2 in a tissue-dependent manner. O.I. C.G. H.G.
23.0 99.6 61.3 At5g28150 832890 unknown protein F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
22.9 99.6 29.4 At5g63320 836452 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
21.9 99.6 305.9 At2g42530 818853 COR15B (COLD REGULATED 15B) F:unknown;P:response to cold;C:chloroplast, chloroplast stroma, chloroplast envelope;PBOMF O.I. C.G. H.G.
21.6 99.6 194.3 At5g62360 836357 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
21.0 99.6 52.1 At5g17850 831653 cation exchanger, putative (CAX8) F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA O.I. C.G. H.G.
20.8 99.6 275.0 At3g17800 821048 - mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem O.I. C.G. H.G.
20.8 99.6 111.9 At3g12320 820411 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
20.8 99.6 71.7 At5g25110 832582 CIPK25 (CBL-INTERACTING PROTEIN KINASE 25) member of AtCIPKs O.I. C.G. H.G.
20.5 99.6 53.5 At5g04250 830304 OTU-like cysteine protease family protein F:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MPOFVB O.I. C.G. H.G.
20.5 99.6 21.5 At2g34850 818050 MEE25 (maternal effect embryo arrest 25) F:coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity;P:embryonic development ending in seed dormancy, pollen tube development, nucleotide-sugar metabolic process;C:cellular_component unknown;BOPMAFV O.I. C.G. H.G.
20.2 99.6 531.0 At2g42540 818854 COR15A (COLD-REGULATED 15A) A cold-regulated gene whose product is targeted to the chloroplast and constitutive expression increases freezing tolerance in protoplasts in vitro and chloroplasts in vivo. NMR and x-ray diffraction studies suggest that COR15a alters the intrinsic curvature of the inner membrane of chloroplast envelope. O.I. C.G. H.G.
20.0 99.6 31.6 At2g45660 819174 AGL20 (AGAMOUS-LIKE 20) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA. O.I. C.G. H.G.
19.9 99.6 41.8 At3g55760 824742 unknown protein F:unknown;P:unknown;C:chloroplast stroma, chloroplast;POMFB O.I. C.G. H.G.
19.8 99.6 481.2 At1g01470 837071 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication. O.I. C.G. H.G.
19.5 99.6 252.6 At5g57660 835872 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;PO O.I. C.G. H.G.
19.2 99.6 34.9 At2g22190 816753 catalytic/ trehalose-phosphatase F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:cellular_component unknown;BPMOFA O.I. C.G. H.G.
18.7 99.5 33.7 At5g48250 834878 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:unknown;C:plasma membrane;POM O.I. C.G. H.G.
18.6 99.5 55.2 At2g21320 816671 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:endomembrane system, intracellular;POM O.I. C.G. H.G.
18.6 99.5 18.0 At4g28150 828930 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
18.5 99.5 34.6 At1g76580 843991 transcription factor F:transcription factor activity;P:regulation of transcription;C:plasma membrane;OMFPB O.I. C.G. H.G.
18.4 99.5 62.6 At1g27760 839669 interferon-related developmental regulator family protein / IFRD protein family Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress. O.I. C.G. H.G.
18.4 99.5 12.8 At5g45630 834603 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
18.3 99.5 165.9 At1g69870 843323 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:response to salt stress, oligopeptide transport;C:plasma membrane, membrane;PBMFO O.I. C.G. H.G.
18.1 99.5 128.9 At5g06980 830589 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
18.1 99.5 7.3 At1g62320 842530 early-responsive to dehydration protein-related / ERD protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FPMO O.I. C.G. H.G.
17.5 99.5 184.9 At3g23000 821874 CIPK7 (CBL-INTERACTING PROTEIN KINASE 7) Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
350.7	100.0	174.7	At3g17130	820970	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
323.4	100.0	402.9	At1g09350	837457	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO	O.I.	C.G.	H.G.
271.1	100.0	72.1	At3g55580	824723	regulator of chromosome condensation (RCC1) family protein	F:binding;P:biological_process unknown;C:cellular_component unknown;MOBPFAV	O.I.	C.G.	H.G.
207.1	100.0	207.6	At4g32190	829352	centromeric protein-related	F:unknown;P:unknown;C:unknown;MOBFPAV	O.I.	C.G.	H.G.
202.2	100.0	164.7	At1g48100	841228	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBOMVA	O.I.	C.G.	H.G.
176.4	100.0	254.0	At1g16850	838256	unknown protein	F:molecular_function unknown;P:response to salt stress;C:endomembrane system;P	O.I.	C.G.	H.G.
156.4	99.9	210.9	At1g51090	841532	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMVF	O.I.	C.G.	H.G.
116.7	99.9	180.2	At3g16800	820933	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, cytoplasm;PMOFV	O.I.	C.G.	H.G.
115.6	99.9	239.6	At4g27560	828865	glycosyltransferase family protein	F:transferase activity, transferring glycosyl groups;P:response to salt stress, N-terminal protein myristoylation;C:cellular_component unknown;PMBFOV	O.I.	C.G.	H.G.
95.7	99.9	52.8	At5g54470	835535	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POFM	O.I.	C.G.	H.G.
89.3	99.9	146.0	At1g11210	837662	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;PO	O.I.	C.G.	H.G.
88.7	99.9	43.1	At1g46768	841117	RAP2.1 (related to AP2 1)	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
87.6	99.9	182.9	At1g60190	842314	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	F:ubiquitin-protein ligase activity, protein binding, binding, zinc ion binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVA	O.I.	C.G.	H.G.
83.7	99.9	116.6	At4g17550	827470	transporter-related	F:sugar:hydrogen symporter activity;P:carbohydrate transport;C:plasma membrane;BMFOPA	O.I.	C.G.	H.G.
75.4	99.9	60.1	At3g01210	821275	nucleic acid binding / oxidoreductase	F:oxidoreductase activity, nucleic acid binding;P:oxidation reduction;C:cellular_component unknown;PFOM	O.I.	C.G.	H.G.
72.2	99.9	258.0	At5g06760	830565	late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy, embryonic development;C:cellular_component unknown;PMBOFV	O.I.	C.G.	H.G.
65.0	99.8	81.4	At1g20030	838592	pathogenesis-related thaumatin family protein	F:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOV	O.I.	C.G.	H.G.
62.8	99.8	256.1	At4g38580	830015	ATFP6 (FARNESYLATED PROTEIN 6)	putative farnesylated protein (At4g38580) mRNA, complete	O.I.	C.G.	H.G.
60.9	99.8	80.8	At4g12000	826807	-	F:unknown;P:response to oxidative stress;C:unknown;BOPMFA	O.I.	C.G.	H.G.
58.5	99.8	117.6	At1g64890	842797	integral membrane transporter family protein	F:transporter activity;P:transport;C:membrane;BOPMAF	O.I.	C.G.	H.G.
57.3	99.8	90.0	At1g21790	838783	-	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MPO	O.I.	C.G.	H.G.
53.9	99.8	146.9	At5g15850	831442	COL1 (constans-like 1)	Homologous to the flowering-time gene CONSTANS.	O.I.	C.G.	H.G.
53.4	99.8	547.8	At4g17090	827419	CT-BMY (CHLOROPLAST BETA-AMYLASE)	Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).	O.I.	C.G.	H.G.
52.4	99.8	247.5	At1g80130	844353	binding	F:binding;P:response to oxidative stress;C:membrane;BPOMFAV	O.I.	C.G.	H.G.
51.3	99.8	60.1	At1g32860	840180	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;POF	O.I.	C.G.	H.G.
51.3	99.8	24.9	At4g34650	829617	SQS2 (SQUALENE SYNTHASE 2)	Encodes a protein with similarity to squalene synthase which catalyzes the first committed step in sterol biosynthesis. To date no experimental evidence exists that SQS2 functions as a squalene synthase and some experiments indicate it does not have this function.	O.I.	C.G.	H.G.
51.2	99.8	113.6	At1g68500	843179	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
47.7	99.8	80.3	At3g24520	822047	AT-HSFC1	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
46.9	99.8	114.3	At1g10410	837581	-	F:unknown;P:N-terminal protein myristoylation;C:chloroplast;POMF	O.I.	C.G.	H.G.
46.1	99.8	216.8	At1g62570	842554	FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4)	belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates	O.I.	C.G.	H.G.
44.8	99.8	196.2	At1g02820	839304	late embryogenesis abundant 3 family protein / LEA3 family protein	F:molecular_function unknown;P:embryonic development, response to stress;C:unknown;P	O.I.	C.G.	H.G.
44.7	99.8	66.5	At3g14890	820718	phosphoesterase	F:DNA binding, catalytic activity, zinc ion binding;P:unknown;C:unknown;MOFPVBA	O.I.	C.G.	H.G.
42.9	99.8	161.8	At5g57110	835815	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.	O.I.	C.G.	H.G.
42.5	99.8	47.7	At1g11960	837748	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;FPMOB	O.I.	C.G.	H.G.
41.5	99.8	134.2	At3g61890	825362	ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.	O.I.	C.G.	H.G.
41.5	99.8	74.0	At1g10090	837544	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FPMO	O.I.	C.G.	H.G.
40.7	99.8	244.4	At4g24960	828598	ATHVA22D	Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development.	O.I.	C.G.	H.G.
40.3	99.8	78.3	At1g78070	844142	-	F:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;PFO	O.I.	C.G.	H.G.
39.6	99.8	60.2	At4g27940	828907	mitochondrial substrate carrier family protein	F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	O.I.	C.G.	H.G.
38.8	99.8	68.1	At5g07920	830686	DGK1 (DIACYLGLYCEROL KINASE1)	diacylglycerol kinase	O.I.	C.G.	H.G.
38.5	99.8	114.8	At3g51895	824353	SULTR3	Encodes a sulfate transporter.	O.I.	C.G.	H.G.
38.3	99.8	620.8	At3g50970	824261	LTI30 (LOW TEMPERATURE-INDUCED 30)	Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid.	O.I.	C.G.	H.G.
37.0	99.7	177.6	At5g40390	834037	SIP1 (seed imbibition 1-like)	Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged.	O.I.	C.G.	H.G.
35.1	99.7	163.8	At1g73480	843683	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:unknown;C:unknown;BOPMFVA	O.I.	C.G.	H.G.
34.7	99.7	323.3	At2g17840	816293	ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)	Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.	O.I.	C.G.	H.G.
34.5	99.7	320.5	At5g20830	832206	SUS1 (SUCROSE SYNTHASE 1)	Encodes a protein with sucrose synthase activity (SUS1).	O.I.	C.G.	H.G.
33.9	99.7	45.5	At5g05220	830404	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
33.4	99.7	19.8	At4g30830	829207	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFBPAV	O.I.	C.G.	H.G.
33.3	99.7	307.8	At5g55180	835611	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO	O.I.	C.G.	H.G.
32.2	99.7	50.3	At1g08890	837410	sugar transporter family protein	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:chloroplast, membrane;MFBPOA	O.I.	C.G.	H.G.
32.1	99.7	107.7	At5g42570	834264	-	F:molecular_function unknown;P:intracellular protein transport;C:endoplasmic reticulum, plasma membrane;MPOFAB	O.I.	C.G.	H.G.
31.5	99.7	41.8	At1g27200	839609	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BPOFM	O.I.	C.G.	H.G.
31.3	99.7	18.0	At2g42150	818815	DNA-binding bromodomain-containing protein	F:DNA binding;P:unknown;C:nucleus;MOFPBV	O.I.	C.G.	H.G.
31.0	99.7	57.2	At4g27820	828895	BGLU9 (BETA GLUCOSIDASE 9)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:peroxisome;BOPMFA	O.I.	C.G.	H.G.
30.8	99.7	303.4	At3g49220	824083	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
30.0	99.7	59.1	At1g67850	843111	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
29.5	99.7	111.7	At3g11670	820339	DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1)	Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).	O.I.	C.G.	H.G.
29.5	99.7	67.3	At5g14760	831328	AO (L-ASPARTATE OXIDASE)	At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2	O.I.	C.G.	H.G.
29.5	99.7	45.5	At4g23920	828492	UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2)	Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in growth and cell wall carbohydrate biosynthesis.	O.I.	C.G.	H.G.
29.4	99.7	129.5	At2g46830	819296	CCA1 (CIRCADIAN CLOCK ASSOCIATED 1)	Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.	O.I.	C.G.	H.G.
29.0	99.7	159.3	At5g15950	831452	adenosylmethionine decarboxylase family protein	F:adenosylmethionine decarboxylase activity;P:spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
28.3	99.7	99.9	At5g42900	834301	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
27.8	99.7	52.2	At5g61810	836303	mitochondrial substrate carrier family protein	F:binding, calcium ion binding;P:transport;C:mitochondrial inner membrane, membrane;MFPOBV	O.I.	C.G.	H.G.
27.7	99.7	50.8	At4g15130	827179	catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferase	F:choline-phosphate cytidylyltransferase activity, catalytic activity, nucleotidyltransferase activity;P:response to cold, biosynthetic process;C:unknown;OMBFPA	O.I.	C.G.	H.G.
27.6	99.7	451.6	At5g52310	835307	LTI78 (LOW-TEMPERATURE-INDUCED 78)	cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression	O.I.	C.G.	H.G.
26.9	99.7	164.1	At1g47710	841182	serpin, putative / serine protease inhibitor, putative	F:serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity;P:biological_process unknown;C:apoplast;MVPBOAF	O.I.	C.G.	H.G.
26.6	99.7	195.3	At1g71950	843526	identical protein binding / serine-type endopeptidase	F:identical protein binding, serine-type endopeptidase activity;P:negative regulation of catalytic activity;C:plasma membrane;P	O.I.	C.G.	H.G.
25.8	99.7	104.3	At4g18280	827554	glycine-rich cell wall protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
25.8	99.7	16.1	At2g24560	816992	carboxylesterase/ hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
25.5	99.7	21.7	At5g61370	836258	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POFMA	O.I.	C.G.	H.G.
25.3	99.6	160.8	At5g52300	835306	LTI65 (LOW-TEMPERATURE-INDUCED 65)	encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.	O.I.	C.G.	H.G.
23.9	99.6	16.7	At1g25250	839108	AtIDD16 (Arabidopsis thaliana Indeterminate(ID)-Domain 16)	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPFBVA	O.I.	C.G.	H.G.
23.5	99.6	461.1	At2g28900	817439	ATOEP16-1 (OUTER PLASTID ENVELOPE PROTEIN 16-1)	Encodes AtOEP16, a 16-KDa plastid outer membrane protein involved in plastid import of protochlorophyllide oxidoreductase A. Predominantly expressed in leaves and is also inducible by cold treatment.	O.I.	C.G.	H.G.
23.4	99.6	254.7	At2g39800	818566	P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1)	encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. P5CS1 appears to be involved in salt stress responses related to proline accumulation, including protection from reactive oxidative species. P5CS1 appears to be present in different cells and/or different subcellular locations from P5CS2 in a tissue-dependent manner.	O.I.	C.G.	H.G.
23.0	99.6	61.3	At5g28150	832890	unknown protein	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
22.9	99.6	29.4	At5g63320	836452	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
21.9	99.6	305.9	At2g42530	818853	COR15B (COLD REGULATED 15B)	F:unknown;P:response to cold;C:chloroplast, chloroplast stroma, chloroplast envelope;PBOMF	O.I.	C.G.	H.G.
21.6	99.6	194.3	At5g62360	836357	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
21.0	99.6	52.1	At5g17850	831653	cation exchanger, putative (CAX8)	F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA	O.I.	C.G.	H.G.
20.8	99.6	275.0	At3g17800	821048	-	mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem	O.I.	C.G.	H.G.
20.8	99.6	111.9	At3g12320	820411	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
20.8	99.6	71.7	At5g25110	832582	CIPK25 (CBL-INTERACTING PROTEIN KINASE 25)	member of AtCIPKs	O.I.	C.G.	H.G.
20.5	99.6	53.5	At5g04250	830304	OTU-like cysteine protease family protein	F:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MPOFVB	O.I.	C.G.	H.G.
20.5	99.6	21.5	At2g34850	818050	MEE25 (maternal effect embryo arrest 25)	F:coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity;P:embryonic development ending in seed dormancy, pollen tube development, nucleotide-sugar metabolic process;C:cellular_component unknown;BOPMAFV	O.I.	C.G.	H.G.
20.2	99.6	531.0	At2g42540	818854	COR15A (COLD-REGULATED 15A)	A cold-regulated gene whose product is targeted to the chloroplast and constitutive expression increases freezing tolerance in protoplasts in vitro and chloroplasts in vivo. NMR and x-ray diffraction studies suggest that COR15a alters the intrinsic curvature of the inner membrane of chloroplast envelope.	O.I.	C.G.	H.G.
20.0	99.6	31.6	At2g45660	819174	AGL20 (AGAMOUS-LIKE 20)	Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.	O.I.	C.G.	H.G.
19.9	99.6	41.8	At3g55760	824742	unknown protein	F:unknown;P:unknown;C:chloroplast stroma, chloroplast;POMFB	O.I.	C.G.	H.G.
19.8	99.6	481.2	At1g01470	837071	LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)	Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.	O.I.	C.G.	H.G.
19.5	99.6	252.6	At5g57660	835872	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;PO	O.I.	C.G.	H.G.
19.2	99.6	34.9	At2g22190	816753	catalytic/ trehalose-phosphatase	F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:cellular_component unknown;BPMOFA	O.I.	C.G.	H.G.
18.7	99.5	33.7	At5g48250	834878	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:unknown;C:plasma membrane;POM	O.I.	C.G.	H.G.
18.6	99.5	55.2	At2g21320	816671	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:endomembrane system, intracellular;POM	O.I.	C.G.	H.G.
18.6	99.5	18.0	At4g28150	828930	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
18.5	99.5	34.6	At1g76580	843991	transcription factor	F:transcription factor activity;P:regulation of transcription;C:plasma membrane;OMFPB	O.I.	C.G.	H.G.
18.4	99.5	62.6	At1g27760	839669	interferon-related developmental regulator family protein / IFRD protein family	Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.	O.I.	C.G.	H.G.
18.4	99.5	12.8	At5g45630	834603	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.3	99.5	165.9	At1g69870	843323	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:response to salt stress, oligopeptide transport;C:plasma membrane, membrane;PBMFO	O.I.	C.G.	H.G.
18.1	99.5	128.9	At5g06980	830589	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
18.1	99.5	7.3	At1g62320	842530	early-responsive to dehydration protein-related / ERD protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FPMO	O.I.	C.G.	H.G.
17.5	99.5	184.9	At3g23000	821874	CIPK7 (CBL-INTERACTING PROTEIN KINASE 7)	Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2.	O.I.	C.G.	H.G.

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GSM ID	GSM131279
Assay name	AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1
GSE experiment	GSE5621: AtGenExpress: Stress Treatments (Cold stress)

Microarray experiments to specifically-expressed genes

GSM ID GSM131279 Assay name AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1 GSE experiment GSE5621: AtGenExpress: Stress Treatments (Cold stress)

GSM ID GSM131279

Assay name AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1

GSE experiment GSE5621: AtGenExpress: Stress Treatments (Cold stress)