CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM131182

Assay name AtGen_D-14_1-AS_REP1_ATH1

GSE experiment GSE5617: AtGenExpress: Light treatments

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
79.1 99.9 57.0 At4g01680 826853 MYB55 (myb domain protein 55) Encodes a putative transcription factor (MYB55). O.I. C.G. H.G.
77.0 99.9 78.5 At5g52250 835301 transducin family protein / WD-40 repeat family protein Encodes a transducin protein whose gene expression is induced by UV-B. This induction is reduced in hy5 mutant and may be a target of HY5 during UV-B response. O.I. C.G. H.G.
70.7 99.9 27.4 At1g27670 839659 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
65.6 99.8 326.8 At2g43050 818907 ATPMEPCRD F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
64.8 99.8 89.0 At5g37790 833757 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
62.6 99.8 46.9 At3g54990 824664 SMZ (SCHLAFMUTZE) Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering. O.I. C.G. H.G.
59.4 99.8 134.1 At1g65310 842839 XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17) putative xyloglucan endotransglycosylase/hydrolase, expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs. O.I. C.G. H.G.
58.2 99.8 89.1 At2g02950 814823 PKS1 (PHYTOCHROME KINASE SUBSTRATE 1) Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling. O.I. C.G. H.G.
57.7 99.8 12.8 At3g59440 825113 calcium-binding protein, putative F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MFPOBV O.I. C.G. H.G.
57.4 99.8 31.9 At1g06980 837208 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
54.6 99.8 42.2 At5g02170 831896 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBAV O.I. C.G. H.G.
52.4 99.8 82.3 At2g47270 819340 transcription factor/ transcription regulator F:transcription factor activity, transcription regulator activity;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
51.8 99.8 141.2 At3g48970 824058 copper-binding family protein F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:unknown;PBO O.I. C.G. H.G.
50.1 99.8 190.2 At2g34500 818013 CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1) Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of β-sitosterol to stigmasterol, but not that of 24-epi-campesterol to brassicasterol (unlike CYP710A2). O.I. C.G. H.G.
49.9 99.8 144.9 At5g11110 830979 ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F) Encodes a protein with putative sucrose-phosphate synthase activity.Involved in pollen exine formation. O.I. C.G. H.G.
49.9 99.8 99.1 At1g22640 838870 MYB3 (MYB DOMAIN PROTEIN 3) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression O.I. C.G. H.G.
49.1 99.8 59.2 At1g69570 843293 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;POMFB O.I. C.G. H.G.
48.5 99.8 43.8 At5g62470 836367 MYB96 (myb domain protein 96) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. O.I. C.G. H.G.
47.5 99.8 148.2 At5g15290 831381 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
45.2 99.8 340.6 At5g47450 834794 AtTIP2 Tonoplast intrinsic protein, transports ammonium (NH3) and methylammonium across the tonoplast membrane, gene expression shows diurnal regulation and is upregulated by ammonium (NH3). O.I. C.G. H.G.
43.5 99.8 226.0 At4g11360 826738 RHA1B Encodes a putative RING-H2 finger protein RHA1b. O.I. C.G. H.G.
42.4 99.8 46.4 At5g11260 830996 HY5 (ELONGATED HYPOCOTYL 5) Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. O.I. C.G. H.G.
40.5 99.8 83.9 At1g02340 839300 HFR1 (LONG HYPOCOTYL IN FAR-RED) Encodes a light-inducible, nuclear bHLH protein involved in phytochrome signaling. Mutants exhibit a long-hypocotyl phenotype only under far-red light but not under red light and are defective in other phytochrome A-related responses. Mutants also show blue light response defects. HFR1 interacts with COP1, co-localizes to the nuclear specks and is ubiquinated by COP1. O.I. C.G. H.G.
37.6 99.7 118.9 At1g18330 838413 EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1) EARLY-PHYTOCHROME-RESPONSIVE1 O.I. C.G. H.G.
37.4 99.7 112.9 At5g44440 834471 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM O.I. C.G. H.G.
37.2 99.7 55.8 At3g21890 821744 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:response to UV-B, regulation of transcription;C:intracellular;PO O.I. C.G. H.G.
37.1 99.7 52.7 At2g46270 819235 GBF3 (G-BOX BINDING FACTOR 3) encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3��s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2. O.I. C.G. H.G.
36.6 99.7 178.4 At4g37220 829876 stress-responsive protein, putative F:molecular_function unknown;P:response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus, response to stress;C:cellular_component unknown;P O.I. C.G. H.G.
35.3 99.7 134.8 At5g04120 830290 phosphoglycerate/bisphosphoglycerate mutase family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
35.2 99.7 56.7 At3g05800 819749 transcription factor F:transcription factor activity;P:regulation of transcription;C:nucleus, chloroplast;P O.I. C.G. H.G.
34.5 99.7 244.7 At5g60660 836187 PIP2 F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV O.I. C.G. H.G.
34.0 99.7 215.7 At5g66170 836749 - F:molecular_function unknown;P:aging;C:cellular_component unknown;PBOA O.I. C.G. H.G.
33.9 99.7 83.6 At4g34000 829547 ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid. O.I. C.G. H.G.
33.1 99.7 15.6 At5g43840 834406 AT-HSFA6A member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
32.9 99.7 104.6 At1g67030 843022 ZFP6 (ZINC FINGER PROTEIN 6) Encodes a zinc finger protein containing only a single zinc finger. O.I. C.G. H.G.
32.3 99.7 54.2 At5g55970 835695 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:chloroplast;PMOFV O.I. C.G. H.G.
32.0 99.7 76.1 At4g33750 - - O.I. C.G. H.G.
31.9 99.7 84.7 At2g28110 817357 FRA8 (FRAGILE FIBER 8) Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings. O.I. C.G. H.G.
31.7 99.7 262.6 At1g01120 839395 KCS1 (3-KETOACYL-COA SYNTHASE 1) Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis. O.I. C.G. H.G.
31.7 99.7 108.9 At4g25830 828688 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
31.6 99.7 263.6 At2g21140 816649 ATPRP2 (PROLINE-RICH PROTEIN 2) Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques. O.I. C.G. H.G.
31.5 99.7 63.2 At3g10910 820261 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
31.2 99.7 36.7 At3g52480 824413 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
31.2 99.7 15.9 At3g52540 824420 OFP18 (OVATE FAMILY PROTEIN 18) F:unknown;P:biological_process unknown;C:chloroplast;MPOF O.I. C.G. H.G.
30.9 99.7 88.9 At5g44920 834522 Toll-Interleukin-Resistance (TIR) domain-containing protein F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:endoplasmic reticulum;PBO O.I. C.G. H.G.
30.8 99.7 46.3 At4g23870 828486 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
30.2 99.7 86.0 At1g04220 839578 KCS2 (3-KETOACYL-COA SYNTHASE 2) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
29.1 99.7 55.8 At4g08300 826384 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BPOAMF O.I. C.G. H.G.
28.7 99.7 160.3 At4g18970 827632 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
28.6 99.7 48.2 At4g32070 829338 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein F:binding;P:biological_process unknown;C:vacuole;MOPFBAV O.I. C.G. H.G.
28.5 99.7 360.6 At5g09440 830803 EXL4 (EXORDIUM LIKE 4) F:molecular_function unknown;P:biological_process unknown;C:membrane;PB O.I. C.G. H.G.
28.3 99.7 75.9 At3g49360 824098 glucosamine/galactosamine-6-phosphate isomerase family protein F:6-phosphogluconolactonase activity, catalytic activity;P:pentose-phosphate shunt, carbohydrate metabolic process;C:plasma membrane;BOFMP O.I. C.G. H.G.
28.1 99.7 90.1 At1g07720 837286 KCS3 (3-KETOACYL-COA SYNTHASE 3) Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
27.8 99.7 46.4 At3g26300 822234 CYP71B34 putative cytochrome P450 O.I. C.G. H.G.
27.4 99.7 111.7 At4g01950 827165 GPAT3 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3) Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity. O.I. C.G. H.G.
26.8 99.7 19.3 At1g78440 844180 ATGA2OX1 (gibberellin 2-oxidase 1) Encodes a gibberellin 2-oxidase. O.I. C.G. H.G.
26.7 99.7 198.8 At3g52060 824369 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB O.I. C.G. H.G.
26.7 99.7 119.0 At5g37260 833700 RVE2 (REVEILLE 2) Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis. O.I. C.G. H.G.
26.5 99.7 205.4 At1g61890 842485 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
26.5 99.7 86.9 At1g23030 838911 armadillo/beta-catenin repeat family protein / U-box domain-containing protein F:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBV O.I. C.G. H.G.
26.3 99.7 85.9 At5g01520 831747 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPVF O.I. C.G. H.G.
26.2 99.7 236.3 At2g43535 818955 trypsin inhibitor, putative Encodes a defensin-like (DEFL) family protein. O.I. C.G. H.G.
26.2 99.7 19.5 At5g67020 836837 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PB O.I. C.G. H.G.
26.1 99.7 79.4 At2g30360 817586 SIP4 (SOS3-INTERACTING PROTEIN 4) Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter. O.I. C.G. H.G.
25.3 99.6 77.8 At1g62770 842576 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
25.0 99.6 113.0 At5g04470 830326 SIM (SIAMESE) Encodes a novel nuclear 14-kD protein containing a cyclin binding motif and a motif found in ICK/KRP cell cycle inhibitor proteins. It is required for coordinating cell division and cell differentiation during the development of Arabidopsis trichomes, playing a key role in the mitosis-to-endoreduplication transition. It interacts with D-type cyclins in vivo. O.I. C.G. H.G.
24.8 99.6 224.1 At5g64570 836578 XYL4 Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. O.I. C.G. H.G.
24.8 99.6 50.6 At4g22460 828341 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
24.7 99.6 160.6 At1g12080 837760 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA O.I. C.G. H.G.
24.6 99.6 253.6 At5g10430 830907 AGP4 (ARABINOGALACTAN PROTEIN 4) Encodes arabinogalactan-protein (AGP4). O.I. C.G. H.G.
24.2 99.6 216.3 At1g04250 839568 AXR3 (AUXIN RESISTANT 3) Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. O.I. C.G. H.G.
23.9 99.6 51.8 At5g23220 832386 NIC3 (NICOTINAMIDASE 3) F:nicotinamidase activity, catalytic activity;P:metabolic process;C:unknown;BOAFP O.I. C.G. H.G.
23.8 99.6 61.9 At1g22550 838861 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPOMF O.I. C.G. H.G.
23.6 99.6 261.2 At2g39310 818516 JAL22 (JACALIN-RELATED LECTIN 22) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
23.4 99.6 50.0 At5g04770 830355 CAT6 (CATIONIC AMINO ACID TRANSPORTER 6) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane. O.I. C.G. H.G.
23.3 99.6 30.7 At1g14350 837997 FLP (FOUR LIPS) Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88. O.I. C.G. H.G.
23.1 99.6 62.8 At5g47610 834811 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV O.I. C.G. H.G.
23.0 99.6 247.3 At5g65390 836664 AGP7 F:unknown;P:unknown;C:anchored to membrane;BMOPFVA O.I. C.G. H.G.
22.9 99.6 86.1 At2g40110 818600 yippee family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
22.3 99.6 27.8 At2g36080 818181 DNA-binding protein, putative Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity. O.I. C.G. H.G.
22.2 99.6 93.7 At4g28040 828919 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;PBOAM O.I. C.G. H.G.
22.2 99.6 74.3 At5g04530 830332 KCS19 (3-KETOACYL-COA SYNTHASE 19) Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
22.1 99.6 329.1 At5g56870 835789 BGAL4 (beta-galactosidase 4) F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PBMFOA O.I. C.G. H.G.
22.1 99.6 37.8 At1g32690 840163 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
22.0 99.6 62.7 At1g66760 842994 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA O.I. C.G. H.G.
21.9 99.6 100.9 At1g49660 841390 AtCXE5 (Arabidopsis thaliana carboxyesterase 5) Encodes a protein with carboxylesterase whose activity was tested using pNA. O.I. C.G. H.G.
21.8 99.6 107.7 At1g15100 838073 RHA2A Encodes a putative RING-H2 finger protein RHA2a. O.I. C.G. H.G.
21.8 99.6 69.0 At1g08500 837371 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;P O.I. C.G. H.G.
21.8 99.6 42.6 At3g48020 823957 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
21.8 99.6 28.2 At1g65510 842863 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:endomembrane system;P O.I. C.G. H.G.
21.4 99.6 256.5 At2g17500 816256 auxin efflux carrier family protein F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFOBA O.I. C.G. H.G.
21.4 99.6 19.3 At3g20130 821556 CYP705A22 member of CYP705A O.I. C.G. H.G.
20.9 99.6 132.9 At5g43760 834398 KCS20 (3-KETOACYL-COA SYNTHASE 20) Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
20.6 99.6 117.3 At2g37640 818341 EXP3 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
20.5 99.6 137.0 At4g35060 829658 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
20.3 99.6 212.8 At5g53250 835406 AGP22 (ARABINOGALACTAN PROTEIN 22) F:unknown;P:unknown;C:anchored to membrane;P O.I. C.G. H.G.
20.3 99.6 35.1 At5g57240 835830 ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C) F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOP O.I. C.G. H.G.
20.3 99.6 21.2 At4g16750 827379 DRE-binding transcription factor, putative encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. O.I. C.G. H.G.
20.1 99.6 50.4 At3g05920 819761 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PMOBVFA O.I. C.G. H.G.
19.9 99.6 8.1 At2g18970 816414 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
79.1	99.9	57.0	At4g01680	826853	MYB55 (myb domain protein 55)	Encodes a putative transcription factor (MYB55).	O.I.	C.G.	H.G.
77.0	99.9	78.5	At5g52250	835301	transducin family protein / WD-40 repeat family protein	Encodes a transducin protein whose gene expression is induced by UV-B. This induction is reduced in hy5 mutant and may be a target of HY5 during UV-B response.	O.I.	C.G.	H.G.
70.7	99.9	27.4	At1g27670	839659	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
65.6	99.8	326.8	At2g43050	818907	ATPMEPCRD	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
64.8	99.8	89.0	At5g37790	833757	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
62.6	99.8	46.9	At3g54990	824664	SMZ (SCHLAFMUTZE)	Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.	O.I.	C.G.	H.G.
59.4	99.8	134.1	At1g65310	842839	XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17)	putative xyloglucan endotransglycosylase/hydrolase, expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.	O.I.	C.G.	H.G.
58.2	99.8	89.1	At2g02950	814823	PKS1 (PHYTOCHROME KINASE SUBSTRATE 1)	Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling.	O.I.	C.G.	H.G.
57.7	99.8	12.8	At3g59440	825113	calcium-binding protein, putative	F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MFPOBV	O.I.	C.G.	H.G.
57.4	99.8	31.9	At1g06980	837208	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
54.6	99.8	42.2	At5g02170	831896	amino acid transporter family protein	F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBAV	O.I.	C.G.	H.G.
52.4	99.8	82.3	At2g47270	819340	transcription factor/ transcription regulator	F:transcription factor activity, transcription regulator activity;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
51.8	99.8	141.2	At3g48970	824058	copper-binding family protein	F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:unknown;PBO	O.I.	C.G.	H.G.
50.1	99.8	190.2	At2g34500	818013	CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1)	Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of β-sitosterol to stigmasterol, but not that of 24-epi-campesterol to brassicasterol (unlike CYP710A2).	O.I.	C.G.	H.G.
49.9	99.8	144.9	At5g11110	830979	ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F)	Encodes a protein with putative sucrose-phosphate synthase activity.Involved in pollen exine formation.	O.I.	C.G.	H.G.
49.9	99.8	99.1	At1g22640	838870	MYB3 (MYB DOMAIN PROTEIN 3)	MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression	O.I.	C.G.	H.G.
49.1	99.8	59.2	At1g69570	843293	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;POMFB	O.I.	C.G.	H.G.
48.5	99.8	43.8	At5g62470	836367	MYB96 (myb domain protein 96)	Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid.	O.I.	C.G.	H.G.
47.5	99.8	148.2	At5g15290	831381	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
45.2	99.8	340.6	At5g47450	834794	AtTIP2	Tonoplast intrinsic protein, transports ammonium (NH3) and methylammonium across the tonoplast membrane, gene expression shows diurnal regulation and is upregulated by ammonium (NH3).	O.I.	C.G.	H.G.
43.5	99.8	226.0	At4g11360	826738	RHA1B	Encodes a putative RING-H2 finger protein RHA1b.	O.I.	C.G.	H.G.
42.4	99.8	46.4	At5g11260	830996	HY5 (ELONGATED HYPOCOTYL 5)	Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.	O.I.	C.G.	H.G.
40.5	99.8	83.9	At1g02340	839300	HFR1 (LONG HYPOCOTYL IN FAR-RED)	Encodes a light-inducible, nuclear bHLH protein involved in phytochrome signaling. Mutants exhibit a long-hypocotyl phenotype only under far-red light but not under red light and are defective in other phytochrome A-related responses. Mutants also show blue light response defects. HFR1 interacts with COP1, co-localizes to the nuclear specks and is ubiquinated by COP1.	O.I.	C.G.	H.G.
37.6	99.7	118.9	At1g18330	838413	EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1)	EARLY-PHYTOCHROME-RESPONSIVE1	O.I.	C.G.	H.G.
37.4	99.7	112.9	At5g44440	834471	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM	O.I.	C.G.	H.G.
37.2	99.7	55.8	At3g21890	821744	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:response to UV-B, regulation of transcription;C:intracellular;PO	O.I.	C.G.	H.G.
37.1	99.7	52.7	At2g46270	819235	GBF3 (G-BOX BINDING FACTOR 3)	encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3��s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.	O.I.	C.G.	H.G.
36.6	99.7	178.4	At4g37220	829876	stress-responsive protein, putative	F:molecular_function unknown;P:response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus, response to stress;C:cellular_component unknown;P	O.I.	C.G.	H.G.
35.3	99.7	134.8	At5g04120	830290	phosphoglycerate/bisphosphoglycerate mutase family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
35.2	99.7	56.7	At3g05800	819749	transcription factor	F:transcription factor activity;P:regulation of transcription;C:nucleus, chloroplast;P	O.I.	C.G.	H.G.
34.5	99.7	244.7	At5g60660	836187	PIP2	F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV	O.I.	C.G.	H.G.
34.0	99.7	215.7	At5g66170	836749	-	F:molecular_function unknown;P:aging;C:cellular_component unknown;PBOA	O.I.	C.G.	H.G.
33.9	99.7	83.6	At4g34000	829547	ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3)	Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.	O.I.	C.G.	H.G.
33.1	99.7	15.6	At5g43840	834406	AT-HSFA6A	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
32.9	99.7	104.6	At1g67030	843022	ZFP6 (ZINC FINGER PROTEIN 6)	Encodes a zinc finger protein containing only a single zinc finger.	O.I.	C.G.	H.G.
32.3	99.7	54.2	At5g55970	835695	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:chloroplast;PMOFV	O.I.	C.G.	H.G.
32.0	99.7	76.1	At4g33750		-	-	O.I.	C.G.	H.G.
31.9	99.7	84.7	At2g28110	817357	FRA8 (FRAGILE FIBER 8)	Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings.	O.I.	C.G.	H.G.
31.7	99.7	262.6	At1g01120	839395	KCS1 (3-KETOACYL-COA SYNTHASE 1)	Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.	O.I.	C.G.	H.G.
31.7	99.7	108.9	At4g25830	828688	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
31.6	99.7	263.6	At2g21140	816649	ATPRP2 (PROLINE-RICH PROTEIN 2)	Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques.	O.I.	C.G.	H.G.
31.5	99.7	63.2	At3g10910	820261	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
31.2	99.7	36.7	At3g52480	824413	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
31.2	99.7	15.9	At3g52540	824420	OFP18 (OVATE FAMILY PROTEIN 18)	F:unknown;P:biological_process unknown;C:chloroplast;MPOF	O.I.	C.G.	H.G.
30.9	99.7	88.9	At5g44920	834522	Toll-Interleukin-Resistance (TIR) domain-containing protein	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:endoplasmic reticulum;PBO	O.I.	C.G.	H.G.
30.8	99.7	46.3	At4g23870	828486	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
30.2	99.7	86.0	At1g04220	839578	KCS2 (3-KETOACYL-COA SYNTHASE 2)	Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
29.1	99.7	55.8	At4g08300	826384	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BPOAMF	O.I.	C.G.	H.G.
28.7	99.7	160.3	At4g18970	827632	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
28.6	99.7	48.2	At4g32070	829338	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein	F:binding;P:biological_process unknown;C:vacuole;MOPFBAV	O.I.	C.G.	H.G.
28.5	99.7	360.6	At5g09440	830803	EXL4 (EXORDIUM LIKE 4)	F:molecular_function unknown;P:biological_process unknown;C:membrane;PB	O.I.	C.G.	H.G.
28.3	99.7	75.9	At3g49360	824098	glucosamine/galactosamine-6-phosphate isomerase family protein	F:6-phosphogluconolactonase activity, catalytic activity;P:pentose-phosphate shunt, carbohydrate metabolic process;C:plasma membrane;BOFMP	O.I.	C.G.	H.G.
28.1	99.7	90.1	At1g07720	837286	KCS3 (3-KETOACYL-COA SYNTHASE 3)	Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
27.8	99.7	46.4	At3g26300	822234	CYP71B34	putative cytochrome P450	O.I.	C.G.	H.G.
27.4	99.7	111.7	At4g01950	827165	GPAT3 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3)	Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity.	O.I.	C.G.	H.G.
26.8	99.7	19.3	At1g78440	844180	ATGA2OX1 (gibberellin 2-oxidase 1)	Encodes a gibberellin 2-oxidase.	O.I.	C.G.	H.G.
26.7	99.7	198.8	At3g52060	824369	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB	O.I.	C.G.	H.G.
26.7	99.7	119.0	At5g37260	833700	RVE2 (REVEILLE 2)	Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis.	O.I.	C.G.	H.G.
26.5	99.7	205.4	At1g61890	842485	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
26.5	99.7	86.9	At1g23030	838911	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	F:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBV	O.I.	C.G.	H.G.
26.3	99.7	85.9	At5g01520	831747	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPVF	O.I.	C.G.	H.G.
26.2	99.7	236.3	At2g43535	818955	trypsin inhibitor, putative	Encodes a defensin-like (DEFL) family protein.	O.I.	C.G.	H.G.
26.2	99.7	19.5	At5g67020	836837	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PB	O.I.	C.G.	H.G.
26.1	99.7	79.4	At2g30360	817586	SIP4 (SOS3-INTERACTING PROTEIN 4)	Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter.	O.I.	C.G.	H.G.
25.3	99.6	77.8	At1g62770	842576	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
25.0	99.6	113.0	At5g04470	830326	SIM (SIAMESE)	Encodes a novel nuclear 14-kD protein containing a cyclin binding motif and a motif found in ICK/KRP cell cycle inhibitor proteins. It is required for coordinating cell division and cell differentiation during the development of Arabidopsis trichomes, playing a key role in the mitosis-to-endoreduplication transition. It interacts with D-type cyclins in vivo.	O.I.	C.G.	H.G.
24.8	99.6	224.1	At5g64570	836578	XYL4	Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.	O.I.	C.G.	H.G.
24.8	99.6	50.6	At4g22460	828341	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
24.7	99.6	160.6	At1g12080	837760	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA	O.I.	C.G.	H.G.
24.6	99.6	253.6	At5g10430	830907	AGP4 (ARABINOGALACTAN PROTEIN 4)	Encodes arabinogalactan-protein (AGP4).	O.I.	C.G.	H.G.
24.2	99.6	216.3	At1g04250	839568	AXR3 (AUXIN RESISTANT 3)	Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.	O.I.	C.G.	H.G.
23.9	99.6	51.8	At5g23220	832386	NIC3 (NICOTINAMIDASE 3)	F:nicotinamidase activity, catalytic activity;P:metabolic process;C:unknown;BOAFP	O.I.	C.G.	H.G.
23.8	99.6	61.9	At1g22550	838861	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;BPOMF	O.I.	C.G.	H.G.
23.6	99.6	261.2	At2g39310	818516	JAL22 (JACALIN-RELATED LECTIN 22)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
23.4	99.6	50.0	At5g04770	830355	CAT6 (CATIONIC AMINO ACID TRANSPORTER 6)	Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.	O.I.	C.G.	H.G.
23.3	99.6	30.7	At1g14350	837997	FLP (FOUR LIPS)	Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88.	O.I.	C.G.	H.G.
23.1	99.6	62.8	At5g47610	834811	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV	O.I.	C.G.	H.G.
23.0	99.6	247.3	At5g65390	836664	AGP7	F:unknown;P:unknown;C:anchored to membrane;BMOPFVA	O.I.	C.G.	H.G.
22.9	99.6	86.1	At2g40110	818600	yippee family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
22.3	99.6	27.8	At2g36080	818181	DNA-binding protein, putative	Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.	O.I.	C.G.	H.G.
22.2	99.6	93.7	At4g28040	828919	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;PBOAM	O.I.	C.G.	H.G.
22.2	99.6	74.3	At5g04530	830332	KCS19 (3-KETOACYL-COA SYNTHASE 19)	Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
22.1	99.6	329.1	At5g56870	835789	BGAL4 (beta-galactosidase 4)	F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PBMFOA	O.I.	C.G.	H.G.
22.1	99.6	37.8	At1g32690	840163	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
22.0	99.6	62.7	At1g66760	842994	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA	O.I.	C.G.	H.G.
21.9	99.6	100.9	At1g49660	841390	AtCXE5 (Arabidopsis thaliana carboxyesterase 5)	Encodes a protein with carboxylesterase whose activity was tested using pNA.	O.I.	C.G.	H.G.
21.8	99.6	107.7	At1g15100	838073	RHA2A	Encodes a putative RING-H2 finger protein RHA2a.	O.I.	C.G.	H.G.
21.8	99.6	69.0	At1g08500	837371	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
21.8	99.6	42.6	At3g48020	823957	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
21.8	99.6	28.2	At1g65510	842863	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:endomembrane system;P	O.I.	C.G.	H.G.
21.4	99.6	256.5	At2g17500	816256	auxin efflux carrier family protein	F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFOBA	O.I.	C.G.	H.G.
21.4	99.6	19.3	At3g20130	821556	CYP705A22	member of CYP705A	O.I.	C.G.	H.G.
20.9	99.6	132.9	At5g43760	834398	KCS20 (3-KETOACYL-COA SYNTHASE 20)	Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
20.6	99.6	117.3	At2g37640	818341	EXP3	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
20.5	99.6	137.0	At4g35060	829658	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
20.3	99.6	212.8	At5g53250	835406	AGP22 (ARABINOGALACTAN PROTEIN 22)	F:unknown;P:unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
20.3	99.6	35.1	At5g57240	835830	ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C)	F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
20.3	99.6	21.2	At4g16750	827379	DRE-binding transcription factor, putative	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.	O.I.	C.G.	H.G.
20.1	99.6	50.4	At3g05920	819761	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PMOBVFA	O.I.	C.G.	H.G.
19.9	99.6	8.1	At2g18970	816414	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage

GSM ID	GSM131182
Assay name	AtGen_D-14_1-AS_REP1_ATH1
GSE experiment	GSE5617: AtGenExpress: Light treatments

Microarray experiments to specifically-expressed genes

GSM ID GSM131182 Assay name AtGen_D-14_1-AS_REP1_ATH1 GSE experiment GSE5617: AtGenExpress: Light treatments

GSM ID GSM131182

Assay name AtGen_D-14_1-AS_REP1_ATH1

GSE experiment GSE5617: AtGenExpress: Light treatments