CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM131162

Assay name AtGen_C-12_3-Pi-6_REP3_ATH1

GSE experiment GSE5616: AtGenExpress: Response to Phytophthora infestans

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
192.2 100.0 315.0 At5g61160 836237 AACT1 (anthocyanin 5-aromatic acyltransferase 1) F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
149.7 99.9 304.3 At3g49620 824124 DIN11 (DARK INDUCIBLE 11) encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. O.I. C.G. H.G.
136.2 99.9 32.2 At5g40990 834101 GLIP1 (GDSL LIPASE1) Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. O.I. C.G. H.G.
113.1 99.9 291.1 At3g23550 821934 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAM O.I. C.G. H.G.
103.1 99.9 142.2 At4g24350 828538 phosphorylase family protein F:catalytic activity, nutrient reservoir activity;P:response to wounding;C:plant-type cell wall;BPOAF O.I. C.G. H.G.
102.7 99.9 71.5 At1g06160 837125 ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
68.7 99.9 158.9 At2g30770 817628 CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13) putative cytochrome P450 O.I. C.G. H.G.
67.3 99.8 155.1 At1g26380 839180 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM O.I. C.G. H.G.
65.4 99.8 257.6 At3g26830 822298 PAD3 (PHYTOALEXIN DEFICIENT 3) Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin. O.I. C.G. H.G.
62.2 99.8 367.9 At3g54640 824629 TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN) Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2). O.I. C.G. H.G.
57.0 99.8 593.0 At3g16530 820901 legume lectin family protein Lectin like protein whose expression is induced upon treatment with chitin oligomers. O.I. C.G. H.G.
52.0 99.8 59.6 At3g26200 822221 CYP71B22 putative cytochrome P450 O.I. C.G. H.G.
44.6 99.8 208.0 At1g24807 839085 anthranilate synthase beta subunit, putative F:catalytic activity, anthranilate synthase activity;P:glutamine metabolic process, biosynthetic process, metabolic process;C:chloroplast;BOFAMP O.I. C.G. H.G.
43.7 99.8 92.1 At3g28930 822529 AIG2 (AVRRPT2-INDUCED GENE 2) avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 O.I. C.G. H.G.
39.1 99.8 36.1 At4g11370 826739 RHA1A Encodes a putative RING-H2 finger protein RHA1a. O.I. C.G. H.G.
38.0 99.8 84.5 At1g18570 838438 MYB51 (MYB DOMAIN PROTEIN 51) Encodes a member of the R2R3-MYB transcription family. Involved in indole glucosinolate biosynthesis. O.I. C.G. H.G.
35.9 99.7 74.1 At1g10700 837613 ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3) F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:chloroplast;BOMFAPV O.I. C.G. H.G.
35.3 99.7 237.2 At5g05730 830457 ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots. O.I. C.G. H.G.
34.9 99.7 213.8 At5g27380 832797 GSH2 (GLUTATHIONE SYNTHETASE 2) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. O.I. C.G. H.G.
33.6 99.7 387.1 At2g26560 817197 PLA2A (PHOSPHOLIPASE A 2A) encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. O.I. C.G. H.G.
31.7 99.7 125.9 At1g21130 838709 O-methyltransferase, putative F:methyltransferase activity, protein dimerization activity, O-methyltransferase activity;P:unknown;C:cytosol;PBFOM O.I. C.G. H.G.
30.9 99.7 149.1 At3g48890 824050 ATMP2 putative progesterone-binding protein homolog (Atmp2) mRNA, O.I. C.G. H.G.
29.4 99.7 225.5 At5g17990 831666 TRP1 (tryptophan biosynthesis 1) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. O.I. C.G. H.G.
28.6 99.7 16.4 At1g74080 843748 MYB122 (MYB DOMAIN PROTEIN 122) Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB122). O.I. C.G. H.G.
28.3 99.7 209.3 At4g39950 830154 CYP79B2 Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
27.4 99.7 87.4 At5g22300 832290 NIT4 (NITRILASE 4) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. O.I. C.G. H.G.
26.0 99.7 107.0 At5g57220 835828 CYP81F2 member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi. O.I. C.G. H.G.
25.7 99.7 82.4 At3g63380 825513 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV O.I. C.G. H.G.
25.5 99.7 38.1 At1g26420 839184 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA O.I. C.G. H.G.
24.7 99.6 359.9 At4g27070 828815 TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2) Tryptophan synthase beta. Expressed at low levels in all tissues. O.I. C.G. H.G.
24.7 99.6 18.8 At5g67310 836866 CYP81G1 member of CYP81G O.I. C.G. H.G.
24.3 99.6 218.0 At2g04400 814980 indole-3-glycerol phosphate synthase (IGPS) F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP O.I. C.G. H.G.
23.1 99.6 51.0 At3g62150 825388 PGP21 (P-GLYCOPROTEIN 21) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
22.6 99.6 75.5 At2g29460 817495 ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
20.4 99.6 252.0 At5g44420 834469 PDF1.2 Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. O.I. C.G. H.G.
19.3 99.6 62.4 At5g38900 833882 DSBA oxidoreductase family protein F:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMA O.I. C.G. H.G.
19.2 99.6 82.8 At4g14680 827118 APS3 ATP sulfurylase O.I. C.G. H.G.
18.4 99.5 16.3 At2g31230 817680 ATERF15 (Ethylene-responsive element binding factor 15) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
18.3 99.5 180.8 At5g17380 831604 pyruvate decarboxylase family protein F:pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity;P:unknown;C:cellular_component unknown;OBFPAMV O.I. C.G. H.G.
17.8 99.5 122.5 At1g22890 838896 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
17.4 99.5 158.8 At2g38860 818470 YLS5 Encodes protease I (pfpI)-like protein YLS5. O.I. C.G. H.G.
17.3 99.5 279.0 At4g35630 829715 PSAT Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway. O.I. C.G. H.G.
17.2 99.5 84.1 At1g15520 838122 PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots. O.I. C.G. H.G.
16.8 99.5 14.8 At2g29410 817490 MTPB1 (METAL TOLERANCE PROTEIN B1) member of Zinc transporter (ZAT) family O.I. C.G. H.G.
16.7 99.5 175.5 At5g54960 835587 PDC2 (pyruvate decarboxylase-2) pyruvate decarboxylase-2 O.I. C.G. H.G.
16.6 99.5 233.1 At2g26020 817143 PDF1.2b (plant defensin 1.2b) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. O.I. C.G. H.G.
16.5 99.5 67.3 At4g21680 828255 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOF O.I. C.G. H.G.
16.4 99.5 71.4 At5g23490 832415 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF O.I. C.G. H.G.
16.2 99.5 74.6 At2g41180 818717 sigA-binding protein-related F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
16.2 99.5 52.6 At3g50770 824241 calmodulin-related protein, putative F:calcium ion binding;P:biological_process unknown;C:chloroplast;MFPOB O.I. C.G. H.G.
16.1 99.5 14.6 At4g37670 829921 GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein F:amino-acid N-acetyltransferase activity, N-acetyltransferase activity;P:arginine biosynthetic process, amino acid biosynthetic process, metabolic process;C:cytoplasm;BOAFP O.I. C.G. H.G.
16.0 99.5 103.2 At4g08770 826447 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POF O.I. C.G. H.G.
15.5 99.5 399.0 At3g04720 819632 PR4 (PATHOGENESIS-RELATED 4) Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection. O.I. C.G. H.G.
14.6 99.4 128.2 At2g24180 816952 CYP71B6 (CYTOCHROME P450 71B6) cytochrome P450 monooxygenase O.I. C.G. H.G.
14.2 99.4 34.9 At4g03450 827913 ankyrin repeat family protein F:protein binding;P:unknown;C:unknown;MOPFBVA O.I. C.G. H.G.
14.0 99.4 132.7 At4g04610 825793 APR1 (APS REDUCTASE 1) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. O.I. C.G. H.G.
13.8 99.4 201.2 At1g74100 843750 SOT16 (SULFOTRANSFERASE 16) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates. O.I. C.G. H.G.
13.4 99.4 142.4 At2g39030 818489 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
13.4 99.4 134.4 At1g13110 837868 CYP71B7 member of CYP71B O.I. C.G. H.G.
13.0 99.4 108.9 At4g37520 829907 peroxidase 50 (PER50) (P50) (PRXR2) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cytoplasm;PFOM O.I. C.G. H.G.
12.7 99.3 46.8 At1g64710 842779 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV O.I. C.G. H.G.
12.6 99.3 407.1 At1g05010 839345 EFE (ETHYLENE-FORMING ENZYME) Encodes 1-aminocyclopropane-1-carboxylate oxidase O.I. C.G. H.G.
12.4 99.3 114.4 At3g08640 820011 alphavirus core protein family F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, chloroplast, plastid, chloroplast envelope;MBPOFVA O.I. C.G. H.G.
12.4 99.3 61.8 At1g23090 838917 AST91 (SULFATE TRANSPORTER 91) Encodes AST91 mRNA for sulfate transporter. O.I. C.G. H.G.
12.3 99.3 21.3 At1g33030 840198 O-methyltransferase family 2 protein F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM O.I. C.G. H.G.
12.2 99.3 27.6 At2g41880 818788 GK-1 (GUANYLATE KINASE 1) Guanylate kinase. Involved in nucleotide metabolism. O.I. C.G. H.G.
12.1 99.3 20.1 At2g43000 818902 anac042 (Arabidopsis NAC domain containing protein 42) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
12.0 99.3 89.4 At1g51760 841602 IAR3 (IAA-ALANINE RESISTANT 3) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. O.I. C.G. H.G.
11.9 99.3 512.7 At5g11670 831039 ATNADP-ME2 (NADP-malic enzyme 2) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis. O.I. C.G. H.G.
11.8 99.3 142.0 At4g39940 830153 AKN2 (APS-kinase 2) adenosine-5'-phosphosulfate-kinase (akn2) mRNA, complete O.I. C.G. H.G.
11.7 99.3 53.1 At4g36220 829779 FAH1 (FERULIC ACID 5-HYDROXYLASE 1) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. O.I. C.G. H.G.
11.6 99.3 476.8 At2g02930 814822 ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
11.6 99.3 15.2 At1g16090 838179 WAKL7 (wall associated kinase-like 7) WAK-like kinase O.I. C.G. H.G.
11.4 99.3 174.8 At1g78460 844182 SOUL heme-binding family protein F:binding;P:biological_process unknown;C:endomembrane system;OMPBA O.I. C.G. H.G.
11.3 99.3 54.7 At2g35980 818171 YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast. O.I. C.G. H.G.
11.3 99.3 35.9 At5g47230 834770 ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
11.1 99.2 516.6 At1g02920 839295 GSTF7 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
11.0 99.2 66.2 At1g67810 843107 SUFE2 (SULFUR E 2) Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis. O.I. C.G. H.G.
10.9 99.2 140.3 At5g51070 835180 ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1) ATP-dependent Clp protease regulatory subunit O.I. C.G. H.G.
10.7 99.2 327.3 At3g22890 821861 APS1 (ATP SULFURYLASE 1) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. O.I. C.G. H.G.
10.6 99.2 325.3 At4g22690 828365 CYP706A1 member of CYP706A O.I. C.G. H.G.
10.6 99.2 24.6 At2g15390 816031 FUT4 Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1. O.I. C.G. H.G.
10.4 99.2 175.6 At4g39980 830159 DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1) Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae. O.I. C.G. H.G.
10.3 99.2 30.9 At3g09410 820100 pectinacetylesterase family protein F:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOB O.I. C.G. H.G.
10.2 99.2 130.9 At1g61800 842477 GPT2 glucose6-Phosphate/phosphate transporter 2 O.I. C.G. H.G.
10.1 99.2 206.4 At5g27760 832838 hypoxia-responsive family protein F:molecular_function unknown;P:response to hypoxia;C:cellular_component unknown;PF O.I. C.G. H.G.
10.0 99.2 33.7 At5g25250 832596 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV O.I. C.G. H.G.
10.0 99.2 27.6 At4g03410 827932 peroxisomal membrane protein-related F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MFPO O.I. C.G. H.G.
9.9 99.1 254.6 At4g30530 829176 defense-related protein, putative F:catalytic activity;P:unknown;C:endomembrane system;OBAFPMV O.I. C.G. H.G.
9.9 99.1 79.6 At1g33600 840254 leucine-rich repeat family protein F:protein binding;P:signal transduction;C:cell wall, membrane, plant-type cell wall;PMBOFAV O.I. C.G. H.G.
9.9 99.1 35.7 At4g14230 827064 CBS domain-containing protein-related F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;BOMFPA O.I. C.G. H.G.
9.9 99.1 12.0 At2g35390 818106 ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI) F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:unknown;OBMFAPV O.I. C.G. H.G.
9.8 99.1 152.2 At1g33590 840253 disease resistance protein-related / LRR protein-related F:protein binding;P:signal transduction, defense response;C:cell wall, chloroplast, plant-type cell wall;PMBOFAV O.I. C.G. H.G.
9.8 99.1 125.6 At2g16500 816149 ADC1 (ARGININE DECARBOXYLASE 1) encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Promoter region of ADC1 contains 742-bp AT-rich transposable element, called AtATE, that belongs to the MITE families of repetitive elements. O.I. C.G. H.G.
9.6 99.1 180.2 At4g16260 827320 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:cell wall, plasma membrane;PO O.I. C.G. H.G.
9.6 99.1 54.4 At1g72900 843621 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMO O.I. C.G. H.G.
9.6 99.1 40.1 At3g54150 824582 embryo-abundant protein-related F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA O.I. C.G. H.G.
9.5 99.1 39.5 At2g28210 817367 ATACA2 (ALPHA CARBONIC ANHYDRASE 2) F:carbonate dehydratase activity, zinc ion binding;P:response to carbon dioxide, one-carbon compound metabolic process;C:cellular_component unknown;MBPOFV O.I. C.G. H.G.
9.3 99.1 70.6 At1g66690 842987 S-adenosyl-L-methionine:carboxyl methyltransferase family protein F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMF O.I. C.G. H.G.
9.0 99.1 92.0 At1g24100 839022 UGT74B1 (UDP-glucosyl transferase 74B1) Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
192.2	100.0	315.0	At5g61160	836237	AACT1 (anthocyanin 5-aromatic acyltransferase 1)	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
149.7	99.9	304.3	At3g49620	824124	DIN11 (DARK INDUCIBLE 11)	encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.	O.I.	C.G.	H.G.
136.2	99.9	32.2	At5g40990	834101	GLIP1 (GDSL LIPASE1)	Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.	O.I.	C.G.	H.G.
113.1	99.9	291.1	At3g23550	821934	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAM	O.I.	C.G.	H.G.
103.1	99.9	142.2	At4g24350	828538	phosphorylase family protein	F:catalytic activity, nutrient reservoir activity;P:response to wounding;C:plant-type cell wall;BPOAF	O.I.	C.G.	H.G.
102.7	99.9	71.5	At1g06160	837125	ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
68.7	99.9	158.9	At2g30770	817628	CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13)	putative cytochrome P450	O.I.	C.G.	H.G.
67.3	99.8	155.1	At1g26380	839180	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM	O.I.	C.G.	H.G.
65.4	99.8	257.6	At3g26830	822298	PAD3 (PHYTOALEXIN DEFICIENT 3)	Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.	O.I.	C.G.	H.G.
62.2	99.8	367.9	At3g54640	824629	TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)	Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).	O.I.	C.G.	H.G.
57.0	99.8	593.0	At3g16530	820901	legume lectin family protein	Lectin like protein whose expression is induced upon treatment with chitin oligomers.	O.I.	C.G.	H.G.
52.0	99.8	59.6	At3g26200	822221	CYP71B22	putative cytochrome P450	O.I.	C.G.	H.G.
44.6	99.8	208.0	At1g24807	839085	anthranilate synthase beta subunit, putative	F:catalytic activity, anthranilate synthase activity;P:glutamine metabolic process, biosynthetic process, metabolic process;C:chloroplast;BOFAMP	O.I.	C.G.	H.G.
43.7	99.8	92.1	At3g28930	822529	AIG2 (AVRRPT2-INDUCED GENE 2)	avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2	O.I.	C.G.	H.G.
39.1	99.8	36.1	At4g11370	826739	RHA1A	Encodes a putative RING-H2 finger protein RHA1a.	O.I.	C.G.	H.G.
38.0	99.8	84.5	At1g18570	838438	MYB51 (MYB DOMAIN PROTEIN 51)	Encodes a member of the R2R3-MYB transcription family. Involved in indole glucosinolate biosynthesis.	O.I.	C.G.	H.G.
35.9	99.7	74.1	At1g10700	837613	ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3)	F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:chloroplast;BOMFAPV	O.I.	C.G.	H.G.
35.3	99.7	237.2	At5g05730	830457	ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)	ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.	O.I.	C.G.	H.G.
34.9	99.7	213.8	At5g27380	832797	GSH2 (GLUTATHIONE SYNTHETASE 2)	Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.	O.I.	C.G.	H.G.
33.6	99.7	387.1	At2g26560	817197	PLA2A (PHOSPHOLIPASE A 2A)	encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells.	O.I.	C.G.	H.G.
31.7	99.7	125.9	At1g21130	838709	O-methyltransferase, putative	F:methyltransferase activity, protein dimerization activity, O-methyltransferase activity;P:unknown;C:cytosol;PBFOM	O.I.	C.G.	H.G.
30.9	99.7	149.1	At3g48890	824050	ATMP2	putative progesterone-binding protein homolog (Atmp2) mRNA,	O.I.	C.G.	H.G.
29.4	99.7	225.5	At5g17990	831666	TRP1 (tryptophan biosynthesis 1)	Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.	O.I.	C.G.	H.G.
28.6	99.7	16.4	At1g74080	843748	MYB122 (MYB DOMAIN PROTEIN 122)	Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB122).	O.I.	C.G.	H.G.
28.3	99.7	209.3	At4g39950	830154	CYP79B2	Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
27.4	99.7	87.4	At5g22300	832290	NIT4 (NITRILASE 4)	encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.	O.I.	C.G.	H.G.
26.0	99.7	107.0	At5g57220	835828	CYP81F2	member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi.	O.I.	C.G.	H.G.
25.7	99.7	82.4	At3g63380	825513	calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)	F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV	O.I.	C.G.	H.G.
25.5	99.7	38.1	At1g26420	839184	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA	O.I.	C.G.	H.G.
24.7	99.6	359.9	At4g27070	828815	TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2)	Tryptophan synthase beta. Expressed at low levels in all tissues.	O.I.	C.G.	H.G.
24.7	99.6	18.8	At5g67310	836866	CYP81G1	member of CYP81G	O.I.	C.G.	H.G.
24.3	99.6	218.0	At2g04400	814980	indole-3-glycerol phosphate synthase (IGPS)	F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP	O.I.	C.G.	H.G.
23.1	99.6	51.0	At3g62150	825388	PGP21 (P-GLYCOPROTEIN 21)	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
22.6	99.6	75.5	At2g29460	817495	ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
20.4	99.6	252.0	At5g44420	834469	PDF1.2	Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.	O.I.	C.G.	H.G.
19.3	99.6	62.4	At5g38900	833882	DSBA oxidoreductase family protein	F:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMA	O.I.	C.G.	H.G.
19.2	99.6	82.8	At4g14680	827118	APS3	ATP sulfurylase	O.I.	C.G.	H.G.
18.4	99.5	16.3	At2g31230	817680	ATERF15 (Ethylene-responsive element binding factor 15)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
18.3	99.5	180.8	At5g17380	831604	pyruvate decarboxylase family protein	F:pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity;P:unknown;C:cellular_component unknown;OBFPAMV	O.I.	C.G.	H.G.
17.8	99.5	122.5	At1g22890	838896	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
17.4	99.5	158.8	At2g38860	818470	YLS5	Encodes protease I (pfpI)-like protein YLS5.	O.I.	C.G.	H.G.
17.3	99.5	279.0	At4g35630	829715	PSAT	Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.	O.I.	C.G.	H.G.
17.2	99.5	84.1	At1g15520	838122	PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)	ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots.	O.I.	C.G.	H.G.
16.8	99.5	14.8	At2g29410	817490	MTPB1 (METAL TOLERANCE PROTEIN B1)	member of Zinc transporter (ZAT) family	O.I.	C.G.	H.G.
16.7	99.5	175.5	At5g54960	835587	PDC2 (pyruvate decarboxylase-2)	pyruvate decarboxylase-2	O.I.	C.G.	H.G.
16.6	99.5	233.1	At2g26020	817143	PDF1.2b (plant defensin 1.2b)	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.	O.I.	C.G.	H.G.
16.5	99.5	67.3	At4g21680	828255	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOF	O.I.	C.G.	H.G.
16.4	99.5	71.4	At5g23490	832415	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF	O.I.	C.G.	H.G.
16.2	99.5	74.6	At2g41180	818717	sigA-binding protein-related	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
16.2	99.5	52.6	At3g50770	824241	calmodulin-related protein, putative	F:calcium ion binding;P:biological_process unknown;C:chloroplast;MFPOB	O.I.	C.G.	H.G.
16.1	99.5	14.6	At4g37670	829921	GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein	F:amino-acid N-acetyltransferase activity, N-acetyltransferase activity;P:arginine biosynthetic process, amino acid biosynthetic process, metabolic process;C:cytoplasm;BOAFP	O.I.	C.G.	H.G.
16.0	99.5	103.2	At4g08770	826447	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POF	O.I.	C.G.	H.G.
15.5	99.5	399.0	At3g04720	819632	PR4 (PATHOGENESIS-RELATED 4)	Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.	O.I.	C.G.	H.G.
14.6	99.4	128.2	At2g24180	816952	CYP71B6 (CYTOCHROME P450 71B6)	cytochrome P450 monooxygenase	O.I.	C.G.	H.G.
14.2	99.4	34.9	At4g03450	827913	ankyrin repeat family protein	F:protein binding;P:unknown;C:unknown;MOPFBVA	O.I.	C.G.	H.G.
14.0	99.4	132.7	At4g04610	825793	APR1 (APS REDUCTASE 1)	Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.	O.I.	C.G.	H.G.
13.8	99.4	201.2	At1g74100	843750	SOT16 (SULFOTRANSFERASE 16)	encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.	O.I.	C.G.	H.G.
13.4	99.4	142.4	At2g39030	818489	GCN5-related N-acetyltransferase (GNAT) family protein	F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
13.4	99.4	134.4	At1g13110	837868	CYP71B7	member of CYP71B	O.I.	C.G.	H.G.
13.0	99.4	108.9	At4g37520	829907	peroxidase 50 (PER50) (P50) (PRXR2)	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cytoplasm;PFOM	O.I.	C.G.	H.G.
12.7	99.3	46.8	At1g64710	842779	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV	O.I.	C.G.	H.G.
12.6	99.3	407.1	At1g05010	839345	EFE (ETHYLENE-FORMING ENZYME)	Encodes 1-aminocyclopropane-1-carboxylate oxidase	O.I.	C.G.	H.G.
12.4	99.3	114.4	At3g08640	820011	alphavirus core protein family	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, chloroplast, plastid, chloroplast envelope;MBPOFVA	O.I.	C.G.	H.G.
12.4	99.3	61.8	At1g23090	838917	AST91 (SULFATE TRANSPORTER 91)	Encodes AST91 mRNA for sulfate transporter.	O.I.	C.G.	H.G.
12.3	99.3	21.3	At1g33030	840198	O-methyltransferase family 2 protein	F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM	O.I.	C.G.	H.G.
12.2	99.3	27.6	At2g41880	818788	GK-1 (GUANYLATE KINASE 1)	Guanylate kinase. Involved in nucleotide metabolism.	O.I.	C.G.	H.G.
12.1	99.3	20.1	At2g43000	818902	anac042 (Arabidopsis NAC domain containing protein 42)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
12.0	99.3	89.4	At1g51760	841602	IAR3 (IAA-ALANINE RESISTANT 3)	encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.	O.I.	C.G.	H.G.
11.9	99.3	512.7	At5g11670	831039	ATNADP-ME2 (NADP-malic enzyme 2)	The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis.	O.I.	C.G.	H.G.
11.8	99.3	142.0	At4g39940	830153	AKN2 (APS-kinase 2)	adenosine-5'-phosphosulfate-kinase (akn2) mRNA, complete	O.I.	C.G.	H.G.
11.7	99.3	53.1	At4g36220	829779	FAH1 (FERULIC ACID 5-HYDROXYLASE 1)	encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.	O.I.	C.G.	H.G.
11.6	99.3	476.8	At2g02930	814822	ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3)	Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
11.6	99.3	15.2	At1g16090	838179	WAKL7 (wall associated kinase-like 7)	WAK-like kinase	O.I.	C.G.	H.G.
11.4	99.3	174.8	At1g78460	844182	SOUL heme-binding family protein	F:binding;P:biological_process unknown;C:endomembrane system;OMPBA	O.I.	C.G.	H.G.
11.3	99.3	54.7	At2g35980	818171	YLS9 (YELLOW-LEAF-SPECIFIC GENE 9)	Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.	O.I.	C.G.	H.G.
11.3	99.3	35.9	At5g47230	834770	ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
11.1	99.2	516.6	At1g02920	839295	GSTF7	Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
11.0	99.2	66.2	At1g67810	843107	SUFE2 (SULFUR E 2)	Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.	O.I.	C.G.	H.G.
10.9	99.2	140.3	At5g51070	835180	ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)	ATP-dependent Clp protease regulatory subunit	O.I.	C.G.	H.G.
10.7	99.2	327.3	At3g22890	821861	APS1 (ATP SULFURYLASE 1)	encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.	O.I.	C.G.	H.G.
10.6	99.2	325.3	At4g22690	828365	CYP706A1	member of CYP706A	O.I.	C.G.	H.G.
10.6	99.2	24.6	At2g15390	816031	FUT4	Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1.	O.I.	C.G.	H.G.
10.4	99.2	175.6	At4g39980	830159	DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1)	Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae.	O.I.	C.G.	H.G.
10.3	99.2	30.9	At3g09410	820100	pectinacetylesterase family protein	F:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOB	O.I.	C.G.	H.G.
10.2	99.2	130.9	At1g61800	842477	GPT2	glucose6-Phosphate/phosphate transporter 2	O.I.	C.G.	H.G.
10.1	99.2	206.4	At5g27760	832838	hypoxia-responsive family protein	F:molecular_function unknown;P:response to hypoxia;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
10.0	99.2	33.7	At5g25250	832596	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV	O.I.	C.G.	H.G.
10.0	99.2	27.6	At4g03410	827932	peroxisomal membrane protein-related	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MFPO	O.I.	C.G.	H.G.
9.9	99.1	254.6	At4g30530	829176	defense-related protein, putative	F:catalytic activity;P:unknown;C:endomembrane system;OBAFPMV	O.I.	C.G.	H.G.
9.9	99.1	79.6	At1g33600	840254	leucine-rich repeat family protein	F:protein binding;P:signal transduction;C:cell wall, membrane, plant-type cell wall;PMBOFAV	O.I.	C.G.	H.G.
9.9	99.1	35.7	At4g14230	827064	CBS domain-containing protein-related	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;BOMFPA	O.I.	C.G.	H.G.
9.9	99.1	12.0	At2g35390	818106	ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI)	F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:unknown;OBMFAPV	O.I.	C.G.	H.G.
9.8	99.1	152.2	At1g33590	840253	disease resistance protein-related / LRR protein-related	F:protein binding;P:signal transduction, defense response;C:cell wall, chloroplast, plant-type cell wall;PMBOFAV	O.I.	C.G.	H.G.
9.8	99.1	125.6	At2g16500	816149	ADC1 (ARGININE DECARBOXYLASE 1)	encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Promoter region of ADC1 contains 742-bp AT-rich transposable element, called AtATE, that belongs to the MITE families of repetitive elements.	O.I.	C.G.	H.G.
9.6	99.1	180.2	At4g16260	827320	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:cell wall, plasma membrane;PO	O.I.	C.G.	H.G.
9.6	99.1	54.4	At1g72900	843621	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMO	O.I.	C.G.	H.G.
9.6	99.1	40.1	At3g54150	824582	embryo-abundant protein-related	F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA	O.I.	C.G.	H.G.
9.5	99.1	39.5	At2g28210	817367	ATACA2 (ALPHA CARBONIC ANHYDRASE 2)	F:carbonate dehydratase activity, zinc ion binding;P:response to carbon dioxide, one-carbon compound metabolic process;C:cellular_component unknown;MBPOFV	O.I.	C.G.	H.G.
9.3	99.1	70.6	At1g66690	842987	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMF	O.I.	C.G.	H.G.
9.0	99.1	92.0	At1g24100	839022	UGT74B1 (UDP-glucosyl transferase 74B1)	Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis	O.I.	C.G.	H.G.

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GSM ID	GSM131162
Assay name	AtGen_C-12_3-Pi-6_REP3_ATH1
GSE experiment	GSE5616: AtGenExpress: Response to Phytophthora infestans

Microarray experiments to specifically-expressed genes

GSM ID GSM131162 Assay name AtGen_C-12_3-Pi-6_REP3_ATH1 GSE experiment GSE5616: AtGenExpress: Response to Phytophthora infestans

GSM ID GSM131162

Assay name AtGen_C-12_3-Pi-6_REP3_ATH1

GSE experiment GSE5616: AtGenExpress: Response to Phytophthora infestans