Microarray experiments to specifically-expressed genes

GSM ID GSM131108
Assay name Broadley_1-6_A6-Bo+P3-nutrient-replete_Rep3_ATH1
GSE experiment GSE5614: Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
395.4100.085.8At1g52180841648major intrinsic family protein / MIP family proteinF:water channel activity;P:transport;C:endomembrane system, membrane;PMBOFAO.I.C.G.H.G.
359.1100.01152.1At2g07727815400cytochrome b (MTCYB) (COB) (CYTB)F:electron carrier activity, oxidoreductase activity;P:respiratory electron transport chain;C:membrane;MOBPFAO.I.C.G.H.G.
146.099.952.8At1g02620839269GTP-binding protein (SAR1A)F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MPOFO.I.C.G.H.G.
113.499.923.4At5g41640834166unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
108.899.926.1At2g16410816139transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
108.399.917.8At5g18350831953ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptorF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVO.I.C.G.H.G.
105.499.922.4At1g31520840042unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
102.499.934.4At4g33925829537unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPAOFO.I.C.G.H.G.
100.899.916.8At5g28860833005transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
93.099.925.8At3g20900821639unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownO.I.C.G.H.G.
86.899.917.3At4g23960828496F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
85.299.918.5At3g27840822404RPL12-B (ribosomal protein l12-b)50S ribosomal protein L12-BO.I.C.G.H.G.
83.599.925.3At1g50470841469-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
77.099.919.7At1g01690839243unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MBOPFAO.I.C.G.H.G.
73.899.920.4At4g36105829767unknown proteinF:molecular_function unknown;P:biological_process unknown;C:nucleus;MPOBFVO.I.C.G.H.G.
70.399.920.5At3g44180823540syntaxin-related family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
69.499.933.5At1g77860844122KOM (KOMPEITO)mutant has Altered morphology of pollen exine wall; Seven-Path Transmembrane ProteinO.I.C.G.H.G.
65.399.812.7At5g28560832953unknown proteinF:molecular_function unknown;P:biological_process unknown;C:vacuoleO.I.C.G.H.G.
65.199.86.8At1g39350840697transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
62.499.823.4At4g17580827475Bax inhibitor-1 family protein / BI-1 family proteinF:molecular_function unknown;P:negative regulation of apoptosis, regulation of apoptosis, apoptosis;C:integral to membrane;BMOFPVO.I.C.G.H.G.
61.899.813.1At4g36450829797ATMPK14 (Mitogen-activated protein kinase 14)member of MAP KinaseO.I.C.G.H.G.
61.699.816.2At2g33720817937transcription factorF:transcription factor activity;P:unknown;C:chloroplast;PO.I.C.G.H.G.
60.099.813.0At2g36940818268unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
58.799.816.1At1g56270842080unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
58.499.829.0At5g52975835376unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
57.399.815.2At1g07025837213mitochondrial substrate carrier family proteinF:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOO.I.C.G.H.G.
57.099.818.8At1g59680842259EDA1 (embryo sac development arrest 1)F:molecular_function unknown;P:megagametogenesis;C:cellular_component unknown;PO.I.C.G.H.G.
56.599.819.5At2g146403767779transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
56.099.829.5At4g38760830031unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOO.I.C.G.H.G.
55.899.811.3At5g38370833820zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:intracellular;PO.I.C.G.H.G.
55.299.820.4At4g17710827492HDG4 (HOMEODOMAIN GLABROUS 4)Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.O.I.C.G.H.G.
55.199.810.7At1g50530841475-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
50.199.824.7At2g10930815557unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
50.199.822.0At1g35617840460unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFO.I.C.G.H.G.
49.599.813.1At5g51420835216long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinF:acyltransferase activity;P:unknown;C:unknown;PBOO.I.C.G.H.G.
47.799.814.1At4g11940826801unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
47.599.820.1At1g19930838582kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBOVAO.I.C.G.H.G.
47.199.812.0At1g56380842091mitochondrial transcription termination factor family protein / mTERF family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
46.899.819.4At1g49110841334unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
46.299.819.2At2g33260817889tryptophan/tyrosine permease family proteinF:L-tyrosine transmembrane transporter activity;P:amino acid transport;C:membrane;BOPAMFO.I.C.G.H.G.
45.399.864.2At2g0772581539860S ribosomal protein L5 (RPL5)F:structural constituent of ribosome;P:translation;C:ribosome, intracellular;POO.I.C.G.H.G.
45.099.817.0At3g58860825055F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
44.999.820.3At3g46360823782unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
44.499.819.3At4g04760825812sugar transporter family proteinF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAO.I.C.G.H.G.
44.199.830.2At5g57720835879transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;POFMO.I.C.G.H.G.
43.899.815.0At1g31240840012DNA bindingF:DNA binding;P:biological_process unknown;C:cellular_component unknown;MPOO.I.C.G.H.G.
43.899.814.1At3g58890825058syntaxin-related family proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
43.799.831.3At1g14260837987zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVO.I.C.G.H.G.
43.499.817.5At1g25460839132oxidoreductase family proteinF:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process, flavonoid biosynthetic process;C:cellular_component unknown;BOPFMAVO.I.C.G.H.G.
43.299.823.1At5g15380831390DRM1 (domains rearranged methylase 1)Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.O.I.C.G.H.G.
42.799.814.5At3g26160822216CYP71B17putative cytochrome P450O.I.C.G.H.G.
42.599.822.8At2g052003768310transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
42.499.813.3At3g25280822122proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PBMFOO.I.C.G.H.G.
41.799.844.7At5g57590835863BIO1 (biotin auxotroph 1)Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.O.I.C.G.H.G.
41.599.814.5At1g78840844221F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
41.299.820.5At4g174503770187transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
41.199.824.1At3g43900823506unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
40.799.822.6At1g34440840347unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
40.799.817.9At3g10600820229CAT7 (CATIONIC AMINO ACID TRANSPORTER 7)Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.O.I.C.G.H.G.
40.599.819.1At3g28680822498prolylcarboxypeptidase-relatedF:serine-type peptidase activity;P:proteolysis;C:endomembrane system;MPOO.I.C.G.H.G.
40.199.818.2At3g22250821795UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMVBOFO.I.C.G.H.G.
40.099.816.9At2g34360817999antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMO.I.C.G.H.G.
39.999.812.0At3g310233769170transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
39.899.86.0At3g44080823526F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
39.499.815.8At2g355903768541-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
39.499.812.3At3g31320822882transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
39.199.833.3At5g17250831589catalytic/ transferaseF:transferase activity, catalytic activity;P:GPI anchor biosynthetic process, metabolic process;C:endomembrane system;MFOBPO.I.C.G.H.G.
39.099.87.3At5g32610833243transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
38.999.814.1At3g13170820506ATSPO11-1Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.O.I.C.G.H.G.
38.999.811.4At2g40580818653protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVAO.I.C.G.H.G.
38.599.819.5At3g54060824573unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVO.I.C.G.H.G.
38.499.828.7At2g30790817630PSBP-2 (photosystem II subunit P-2)Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.O.I.C.G.H.G.
38.399.839.6At4g20310827778metalloendopeptidaseF:metalloendopeptidase activity;P:proteolysis;C:membrane;MAPOBFO.I.C.G.H.G.
38.399.822.0At2g24310816967unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPVAO.I.C.G.H.G.
38.199.818.0At2g33020817864AtRLP24 (Receptor Like Protein 24)F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
37.699.76.3At4g121803769991transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
37.599.717.7At4g05620825934F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
37.399.719.3At3g20700821617F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
37.299.7451.8At1g04820839405TUA4Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers.O.I.C.G.H.G.
37.299.714.7At3g18460821375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOO.I.C.G.H.G.
36.999.720.2At5g66710836804protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
36.499.717.4At4g38590830016glycosyl hydrolase family 35 proteinputative beta-galactosidase (BGAL14 gene)O.I.C.G.H.G.
36.499.717.2At5g25860832655F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
36.499.716.6At5g48420834897unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
36.499.715.4At1g246403766791transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
36.399.711.8At5g12910831131histone H3, putativeF:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;MFPOO.I.C.G.H.G.
35.699.716.6At5g45770834616AtRLP55 (Receptor Like Protein 55)F:protein binding;P:unknown;C:unknown;PMBOFAVO.I.C.G.H.G.
35.299.713.1At5g28310832915oxidoreductase-relatedF:oxidoreductase activity, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding;P:metabolic process;C:cellular_component unknown;BOPFAMO.I.C.G.H.G.
34.799.715.1At3g49150824076-F:molecular_function unknown;P:protein insertion into membrane;C:integral to membrane;PMFO.I.C.G.H.G.
34.399.718.4At5g36870833654ATGSL09 (glucan synthase-like 9)encodes a gene similar to callose synthaseO.I.C.G.H.G.
34.299.77.8At2g14450815933transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
34.199.710.0At3g19085821443-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
34.099.710.6At2g18970816414unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
33.999.727.2At1g28220839716ATPUP3Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.O.I.C.G.H.G.
33.799.712.5At3g42700823290transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
33.399.77.3At1g14430838005glyoxal oxidase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBFOMO.I.C.G.H.G.
32.899.715.4At5g44850834515-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBOO.I.C.G.H.G.
32.899.77.6At1g77780844115glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFOO.I.C.G.H.G.
32.799.720.9At5g48950834953thioesterase family proteinF:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOPO.I.C.G.H.G.
32.799.77.0At2g35580818123serpin family protein / serine protease inhibitor family proteinF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;MVBPOAFO.I.C.G.H.G.



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