Microarray experiments to specifically-expressed genes

GSM ID GSM131065
Assay name Hammond_2-6_pho1mutant_Rep3_ATH1
GSE experiment GSE5611: Differential gene expression patterns in the phosphate deficient mutant, pho 1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
311.3100.069.5At3g43110823370unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
201.5100.0244.5At5g20790832202unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
182.8100.0263.1At5g01220831888SQD2 (sulfoquinovosyldiacylglycerol 2)involved in sulfolipid biosynthesisO.I.C.G.H.G.
122.499.9120.1At3g03790821145ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family proteinF:binding;P:biological_process unknown;C:unknown;MOBFPVAO.I.C.G.H.G.
120.199.966.1At2g13810815864ALD1 (AGD2-LIKE DEFENSE RESPONSE PROTEIN1)F:transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity;P:asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation;C:chloroplast;BOAPMFO.I.C.G.H.G.
93.599.9118.6At2g45130819120SPX3 (SPX DOMAIN GENE 3)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPOO.I.C.G.H.G.
83.099.973.3At1g08310837351esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:unknown;BPOMFAO.I.C.G.H.G.
81.899.956.5At1g19200838503senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
71.899.9275.9At1g73010843632phosphataseF:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBFO.I.C.G.H.G.
62.199.851.0At1g72890843620disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMOO.I.C.G.H.G.
60.499.8133.9At2g11810815657MGDCMGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.O.I.C.G.H.G.
58.099.859.3At1g52940841727PAP5 (PURPLE ACID PHOSPHATASE 5)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFAO.I.C.G.H.G.
57.899.815.3At3g10150820178PAP16 (PURPLE ACID PHOSPHATASE 16)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:membrane;FBPOO.I.C.G.H.G.
57.399.886.6At3g56040824770UGP3 (UDP-GLUCOSE PYROPHOSPHORYLASE 3)F:unknown;P:biological_process unknown;C:chloroplast;PFOMBO.I.C.G.H.G.
54.699.8215.5At1g17710838347phosphataseF:phosphatase activity;P:metabolic process;C:unknown;MPOBFO.I.C.G.H.G.
53.999.891.6At1g61120842405TPS04 (TERPENE SYNTHASE 04)Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum.O.I.C.G.H.G.
52.299.874.4At1g19250838508FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)FMO1 is required for full expression of TIR-NB-LRR–conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.O.I.C.G.H.G.
52.099.849.6At2g30540817603glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBOO.I.C.G.H.G.
50.599.8247.1At2g18660816381EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.O.I.C.G.H.G.
49.899.810.9At1g17615838338disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOO.I.C.G.H.G.
46.999.856.1At1g71130843453AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.O.I.C.G.H.G.
46.299.8109.0At1g08650837387PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.O.I.C.G.H.G.
46.199.821.0At1g53620841797unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVO.I.C.G.H.G.
43.799.839.7At3g05630819730PLDP2Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.O.I.C.G.H.G.
43.699.8204.8At3g02040821175SRG3 (senescence-related gene 3)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAVO.I.C.G.H.G.
43.599.830.0At3g52820824448PAP22 (PURPLE ACID PHOSPHATASE 22)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFAO.I.C.G.H.G.
38.399.849.0At2g03020814831heat shock protein-relatedF:aspartic-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;PBOO.I.C.G.H.G.
38.099.874.1At4g03960825706tyrosine specific protein phosphatase family proteinF:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FPOBMO.I.C.G.H.G.
36.499.7103.5At2g34810818046FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to jasmonic acid stimulus, response to wounding;C:endomembrane system;FBPOAMO.I.C.G.H.G.
34.299.745.3At4g00500827973lipase class 3 family protein / calmodulin-binding heat-shock protein-relatedF:triacylglycerol lipase activity, calmodulin binding;P:lipid catabolic process, lipid metabolic process;C:endomembrane system;MPOFO.I.C.G.H.G.
34.099.712.2At1g76430843976phosphate transporter family proteinF:phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport;C:membrane;BFMPOAO.I.C.G.H.G.
33.499.752.9At1g23140838922C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPFOO.I.C.G.H.G.
33.299.716.8At4g23000828399hydrolase/ protein serine/threonine phosphataseF:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:cellular_component unknown;BPOO.I.C.G.H.G.
32.599.752.9At3g03530821243NPC4 (NONSPECIFIC PHOSPHOLIPASE C4)PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation.O.I.C.G.H.G.
31.899.7297.2At4g33030829440SQD1involved in sulfolipid biosynthesisO.I.C.G.H.G.
31.699.7133.2At3g47420823896glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putativeF:sugar:hydrogen symporter activity;P:carbohydrate transport;C:unknown;BFOMAPO.I.C.G.H.G.
30.799.744.6At2g36970818271UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBVOFO.I.C.G.H.G.
30.099.742.7At5g64000836521SAL23'(2'),5'-bisphosphate nucleotidaseO.I.C.G.H.G.
27.599.741.4At4g31240829251-F:unknown;P:cell redox homeostasis;C:cellular_component unknown;OMBPO.I.C.G.H.G.
26.799.724.4At5g02200830832FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE)Encodes a small plant-specific protein with both nuclear localization and nuclear export signals that is specifically required, together with FHY1, for the light-regulated nuclear accumulation of phyA.O.I.C.G.H.G.
26.299.7229.7At3g17790821047PAP17F:phosphatase activity, protein serine/threonine phosphatase activity, acid phosphatase activity;P:response to hydrogen peroxide, cellular phosphate ion homeostasis;C:cell surface;MOBPFAO.I.C.G.H.G.
25.999.7198.2At5g20150832137SPX1 (SPX DOMAIN GENE 1)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBAO.I.C.G.H.G.
25.899.759.2At1g13750837935calcineurin-like phosphoesterase family proteinF:hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFO.I.C.G.H.G.
25.499.613.5At5g09470830806mitochondrial substrate carrier family proteinF:oxidative phosphorylation uncoupler activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOVO.I.C.G.H.G.
24.199.661.8At2g46880819301PAP14 (PURPLE ACID PHOSPHATASE 14)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOO.I.C.G.H.G.
22.999.6137.0At2g30550817604lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;PFOBMVO.I.C.G.H.G.
22.799.66.4At3g21620821716early-responsive to dehydration protein-related / ERD protein-relatedF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;FPMOO.I.C.G.H.G.
20.099.613.5At1g03020839505glutaredoxin family proteinF:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOBO.I.C.G.H.G.
19.499.632.2At3g04530819609PPCK2Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.O.I.C.G.H.G.
19.299.628.2At1g68740843205EXS family protein / ERD1/XPR1/SYG1 family proteinEncodes PHO1;H1, a member of the PHO1 family. Involved in inorganic phosphate (Pi) transport and homeostasis. Complements pho1 mutation.O.I.C.G.H.G.
18.999.559.4At1g70900843429unknown proteinF:molecular_function unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
18.799.543.4At3g11010820272AtRLP34 (Receptor Like Protein 34)F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAVO.I.C.G.H.G.
18.299.517.3At1g21240838719WAK3 (wall associated kinase 3)encodes a wall-associated kinaseO.I.C.G.H.G.
17.999.511.9At1g52800841713oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
17.899.535.0At3g09560820113lipin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVAO.I.C.G.H.G.
17.699.552.5At1g22990838907heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFMO.I.C.G.H.G.
17.499.568.7At1g52000841629jacalin lectin family proteinF:molecular_function unknown;P:response to salt stress;C:cellular_component unknown;BOMPFVAO.I.C.G.H.G.
17.299.531.0At4g24890828591PAP24 (PURPLE ACID PHOSPHATASE 24)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFO.I.C.G.H.G.
16.699.549.5At5g63130836433octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.599.576.8At2g26660817207SPX2 (SPX DOMAIN GENE 2)F:molecular_function unknown;P:cellular response to phosphate starvation;C:nucleus;FMPOBO.I.C.G.H.G.
16.499.526.5At1g67600843081-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOPO.I.C.G.H.G.
16.099.5144.1At5g43150834332unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
15.899.516.5At1g17830838361unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
15.699.513.7At3g44520--O.I.C.G.H.G.
15.299.435.9At1g48370841257YSL8 (YELLOW STRIPE LIKE 8)Arabidopsis thaliana metal-nicotianamine transporter YSL4O.I.C.G.H.G.
14.999.486.6At3g10420820206sporulation protein-relatedF:nucleoside-triphosphatase activity, nucleotide binding;P:unknown;C:chloroplast;BOPAMFO.I.C.G.H.G.
14.799.457.9At3g11230820293yippee family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MFPOO.I.C.G.H.G.
14.599.4149.4At3g60420825213-F:unknown;P:unknown;C:cellular_component unknown;OBFPMO.I.C.G.H.G.
14.599.424.8At1g30500839929NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7)F:transcription factor activity, specific transcriptional repressor activity;P:negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus;PMFOO.I.C.G.H.G.
14.499.454.8At1g31550840045GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBFOMO.I.C.G.H.G.
14.199.4239.4At1g66100842924thionin, putativePredicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.O.I.C.G.H.G.
13.799.414.9At3g44510823576-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO.I.C.G.H.G.
13.699.452.1At3g47480823902calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOBO.I.C.G.H.G.
13.599.4198.7At2g24850817022TAT3 (TYROSINE AMINOTRANSFERASE 3)Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid.O.I.C.G.H.G.
13.399.473.2At4g21470828232ATFMN/FHY (riboflavin kinase/FMN hydrolase)Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.O.I.C.G.H.G.
13.399.438.7At1g69730843309protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVAO.I.C.G.H.G.
13.199.421.5At4g33770829519inositol 1,3,4-trisphosphate 5/6-kinase family proteinF:inositol or phosphatidylinositol kinase activity, magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, inositol tetrakisphosphate 1-kinase activity, ATP binding;P:inositol trisphosphate metabolic process;C:intracellular;PMOO.I.C.G.H.G.
12.999.39.9At1g77960844131unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVO.I.C.G.H.G.
12.799.383.3At1g68670843197myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMO.I.C.G.H.G.
12.599.311.0At2g32830817844PHT5phosphate transporterO.I.C.G.H.G.
12.399.3249.1At3g18080821333BGLU44 (B-S GLUCOSIDASE 44)F:in 6 functions;P:carbohydrate metabolic process;C:cytosolic ribosome, cell wall, plant-type cell wall;BOPMFAO.I.C.G.H.G.
12.399.3188.9At2g42690818869lipase, putativeF:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;PFOBMVO.I.C.G.H.G.
12.399.38.0At2g38940818479ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2)phosphate transporter (AtPT2)O.I.C.G.H.G.
12.299.362.9At3g07350819923unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
12.299.316.0At1g62540842551FMO GS-OX2 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 2)belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolatesO.I.C.G.H.G.
12.299.37.6At1g74200843760AtRLP16 (Receptor Like Protein 16)F:protein binding;P:signal transduction;C:cellular_component unknown;PMOBFAO.I.C.G.H.G.
11.999.361.5At5g09570830816-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOO.I.C.G.H.G.
11.999.33.6At4g05030825845heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:mitochondrion;PO.I.C.G.H.G.
11.899.3108.9At4g04840825821methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;BOMPFAVO.I.C.G.H.G.
11.499.359.2At1g74710843810isochorismate synthase 1 (ICS1) / isochorismate mutaseEncodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).O.I.C.G.H.G.
11.399.328.1At5g19430832063zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOVFO.I.C.G.H.G.
11.299.256.9At5g39670833963calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBO.I.C.G.H.G.
11.299.220.1At4g32270829360unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPOO.I.C.G.H.G.
11.199.235.4At3g59300825099unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOMO.I.C.G.H.G.
11.199.233.2At5g36940833664CAT3 (CATIONIC AMINO ACID TRANSPORTER 3)Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs.O.I.C.G.H.G.
11.099.252.7At2g29460817495ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
10.999.237.9At1g14230837984nucleoside phosphatase family protein / GDA1/CD39 family proteinF:hydrolase activity;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.
10.899.213.0At3g02980821166GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;MOPFABO.I.C.G.H.G.
10.699.2101.4At4g15210827185BAM5 (BETA-AMYLASE 5)cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.O.I.C.G.H.G.
10.699.252.7At1g21270838723WAK2cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.O.I.C.G.H.G.



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