CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM128732

Assay name Hennig_1-4_flower-buds-CK_021114_1_B_Rep2_ATH1

GSE experiment GSE5526: Transcriptional Programs of Early Reproductive Stages in Arabidopsis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
156.0 99.9 175.6 At4g37900 829946 glycine-rich protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVA O.I. C.G. H.G.
155.6 99.9 135.2 At1g30020 839881 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
135.3 99.9 178.4 At1g06260 837137 cysteine proteinase, putative F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
134.6 99.9 76.7 At1g74540 843795 CYP98A8 member of CYP98A O.I. C.G. H.G.
111.9 99.9 94.4 At4g14815 827138 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P O.I. C.G. H.G.
108.4 99.9 223.9 At1g67990 843127 TSM1 Encodes a tapetum-specific O-methyltransferase. In vitro enzyme assay indicated activity with caffeoyl-CoA, caffeoyl glucose, chlorogenic acid and polyamine conjugates. RNAi mutants had impaired silique development and seed setting. O.I. C.G. H.G.
97.0 99.9 113.4 At2g03740 814901 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFA O.I. C.G. H.G.
94.7 99.9 93.7 At1g20120 838601 family II extracellular lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV O.I. C.G. H.G.
94.5 99.9 103.7 At5g16960 831559 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:response to oxidative stress;C:unknown;BOMFPA O.I. C.G. H.G.
84.5 99.9 30.5 At1g79780 844317 - F:molecular_function unknown;P:biological_process unknown;C:membrane;P O.I. C.G. H.G.
84.1 99.9 98.5 At1g61110 842404 anac025 (Arabidopsis NAC domain containing protein 25) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
84.1 99.9 74.5 At1g75920 843925 family II extracellular lipase 5 (EXL5) F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM O.I. C.G. H.G.
83.5 99.9 36.8 At1g75790 843912 sks18 (SKU5 Similar 18) F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA O.I. C.G. H.G.
81.0 99.9 89.5 At5g48210 834874 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
77.6 99.9 115.2 At4g28395 828956 ATA7 related to lipid transfer proteins O.I. C.G. H.G.
75.8 99.9 56.6 At2g19070 816424 SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE) encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) O.I. C.G. H.G.
75.6 99.9 78.3 At1g62940 842596 ACOS5 (ACYL-COA SYNTHETASE 5) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile. O.I. C.G. H.G.
75.4 99.9 117.4 At2g03850 814911 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA O.I. C.G. H.G.
75.2 99.9 282.8 At3g51590 824322 LTP12 (LIPID TRANSFER PROTEIN 12) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
74.2 99.9 236.3 At1g68875 843220 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
72.7 99.9 76.4 At1g28375 839734 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
70.8 99.9 203.3 At1g75910 843924 EXL4 member of Lipase proteins O.I. C.G. H.G.
68.7 99.9 197.8 At5g62080 836328 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
67.2 99.8 79.4 At5g16920 831555 - F:molecular_function unknown;P:unknown;C:endomembrane system;PO O.I. C.G. H.G.
66.6 99.8 167.6 At1g33430 840236 galactosyltransferase family protein F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:pollen exine formation;C:endomembrane system, membrane;MPO O.I. C.G. H.G.
63.9 99.8 56.5 At3g15270 820758 SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5) Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. O.I. C.G. H.G.
63.5 99.8 68.7 At1g13140 837871 CYP86C3 member of CYP86C O.I. C.G. H.G.
62.0 99.8 72.5 At1g28430 839741 CYP705A24 member of CYP705A O.I. C.G. H.G.
60.5 99.8 52.9 At5g65205 836644 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
58.1 99.8 41.9 At1g30350 839915 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO O.I. C.G. H.G.
57.6 99.8 68.4 At3g26125 822212 CYP86C2 encodes a protein with cytochrome P450 domain O.I. C.G. H.G.
57.3 99.8 182.1 At1g75930 843926 EXL6 member of Lipase proteins O.I. C.G. H.G.
57.0 99.8 229.0 At5g07560 830649 GRP20 (GLYCINE-RICH PROTEIN 20) Lipid-binding oleosins, glycine-rich protein. O.I. C.G. H.G.
55.9 99.8 162.0 At3g25050 822096 XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3) encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment. O.I. C.G. H.G.
55.9 99.8 18.9 At5g49070 834966 KCS21 (3-KETOACYL-COA SYNTHASE 21) Encodes KCS21, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
54.6 99.8 53.2 At3g52160 824381 KCS15 (3-KETOACYL-COA SYNTHASE 15) Encodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
54.1 99.8 127.8 At4g14080 827044 MEE48 (maternal effect embryo arrest 48) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;PO O.I. C.G. H.G.
52.7 99.8 21.0 At1g26710 839212 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
52.5 99.8 54.3 At1g23570 838967 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
52.3 99.8 52.9 At5g07520 830645 GRP18 (GLYCINE-RICH PROTEIN 18) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12). O.I. C.G. H.G.
52.1 99.8 146.7 At5g07230 830614 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
50.7 99.8 65.7 At1g69500 843283 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAV O.I. C.G. H.G.
49.6 99.8 19.5 At1g06990 837209 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
49.2 99.8 69.8 At1g02050 839280 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOF O.I. C.G. H.G.
48.6 99.8 34.9 At3g06100 819783 NIP7 F:water channel activity;P:transport;C:membrane;BPMOFAV O.I. C.G. H.G.
48.5 99.8 49.8 At5g13380 831179 auxin-responsive GH3 family protein F:unknown;P:response to auxin stimulus;C:cellular_component unknown;OBPMF O.I. C.G. H.G.
46.7 99.8 27.4 At1g71160 843456 KCS7 (3-KETOACYL-COA SYNTHASE 7) Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
46.1 99.8 86.9 At4g20050 827750 QRT3 (QUARTET 3) Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. O.I. C.G. H.G.
44.7 99.8 31.9 At1g13150 837873 CYP86C4 member of CYP86C O.I. C.G. H.G.
44.1 99.8 68.2 At2g41040 818703 methyltransferase-related F:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFM O.I. C.G. H.G.
42.9 99.8 40.1 At1g74550 843796 CYP98A9 member of CYP98A O.I. C.G. H.G.
42.4 99.8 463.2 At3g15400 820779 ATA20 Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein. O.I. C.G. H.G.
41.9 99.8 66.1 At3g59530 825122 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, pollen exine formation;C:endomembrane system;BPMOFA O.I. C.G. H.G.
41.7 99.8 193.5 At1g75940 843927 ATA27 encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen. O.I. C.G. H.G.
40.7 99.8 23.4 At1g21540 838755 AMP-binding protein, putative F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
40.6 99.8 71.0 At1g68540 843183 oxidoreductase family protein F:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
40.2 99.8 54.7 At5g55720 835666 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO O.I. C.G. H.G.
39.7 99.8 22.6 At1g23600 838970 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
38.6 99.8 22.5 At5g60500 836171 undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein F:transferase activity, transferring alkyl or aryl (other than methyl) groups;P:unknown;C:unknown;BOFMAP O.I. C.G. H.G.
38.2 99.8 76.0 At1g02813 839360 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
37.8 99.8 85.0 At4g35420 829695 dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV O.I. C.G. H.G.
37.6 99.7 27.5 At3g13220 820512 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPV O.I. C.G. H.G.
36.5 99.7 404.1 At1g66850 843003 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
36.1 99.7 26.9 At3g57620 824931 glyoxal oxidase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOM O.I. C.G. H.G.
35.5 99.7 23.3 At1g23520 838960 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
34.7 99.7 96.6 At5g07540 830647 GRP16 (GLYCINE-RICH PROTEIN 16) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). O.I. C.G. H.G.
34.6 99.7 238.4 At5g07530 830646 GRP17 (GLYCINE RICH PROTEIN 17) encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat. O.I. C.G. H.G.
34.4 99.7 24.1 At3g14395 820661 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
34.3 99.7 30.7 At3g23770 821959 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO O.I. C.G. H.G.
34.2 99.7 57.8 At1g12570 837814 glucose-methanol-choline (GMC) oxidoreductase family protein F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVA O.I. C.G. H.G.
34.0 99.7 94.1 At1g58430 842212 RXF26 Encodes an anther-specific proline-rich protein. O.I. C.G. H.G.
34.0 99.7 80.5 At1g10640 837607 polygalacturonase F:polygalacturonase activity;P:carbohydrate metabolic process;C:cellular_component unknown;FPBOMA O.I. C.G. H.G.
33.6 99.7 113.5 At5g17340 831600 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
33.5 99.7 357.5 At5g07550 830648 GRP19 (GLYCINE-RICH PROTEIN 19) member of Oleosin-like protein family O.I. C.G. H.G.
33.3 99.7 46.2 At1g07340 837245 ATSTP2 (SUGAR TRANSPORTER 2) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity;P:pollen development, monosaccharide transport;C:integral to plasma membrane, membrane;FBMPOA O.I. C.G. H.G.
32.8 99.7 81.1 At3g52130 824377 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
32.8 99.7 38.5 At4g29980 829121 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
32.4 99.7 34.5 At1g08065 837324 ACA5 (ALPHA CARBONIC ANHYDRASE 5) F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:endomembrane system;MBPOFV O.I. C.G. H.G.
31.0 99.7 62.8 At4g34850 829637 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF O.I. C.G. H.G.
30.8 99.7 67.7 At1g02190 839541 CER1 protein, putative F:oxidoreductase activity, iron ion binding, catalytic activity;P:oxidation reduction, fatty acid biosynthetic process;C:endoplasmic reticulum;BOPFMV O.I. C.G. H.G.
30.8 99.7 19.3 At2g18420 816357 - Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein O.I. C.G. H.G.
30.2 99.7 96.3 At4g19430 827684 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
29.9 99.7 23.8 At2g47010 819315 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
29.8 99.7 173.3 At2g04570 814999 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
29.4 99.7 274.1 At5g33370 833315 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
29.0 99.7 15.0 At1g06250 837135 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POFBMV O.I. C.G. H.G.
28.0 99.7 240.0 At4g04460 825776 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPB O.I. C.G. H.G.
27.6 99.7 209.6 At5g22430 832304 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
27.6 99.7 68.3 At3g07450 819933 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
27.5 99.7 35.0 At4g23660 828466 AtPPT1 (Arabidopsis thaliana polyprenyltransferase 1) Encodes para-hydroxy benzoate polyprenyl diphosphate transferase. The enzyme was shown to be able to use a wide range of prenyl substrates : from GPP (C10) to decaprenyl diphosphate (C50). O.I. C.G. H.G.
27.1 99.7 35.0 At4g14695 827120 unknown protein F:unknown;P:biological_process unknown;C:mitochondrion;MFPO O.I. C.G. H.G.
26.5 99.7 50.5 At3g11980 820372 MS2 (MALE STERILITY 2) Similar to fatty acid reductases. O.I. C.G. H.G.
26.4 99.7 67.0 At4g18960 827631 AG (AGAMOUS) Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs. O.I. C.G. H.G.
26.3 99.7 20.4 At1g32780 840172 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV O.I. C.G. H.G.
26.0 99.7 57.0 At3g42960 823352 ATA1 (ARABIDOPSIS TAPETUM 1) Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells. O.I. C.G. H.G.
25.9 99.7 6.9 At3g54490 824614 RPB5E (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, E) NRPE5-like protein of unknown function; homologous to budding yeast RPB5 O.I. C.G. H.G.
25.5 99.7 30.4 At4g16270 827322 peroxidase 40 (PER40) (P40) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
25.2 99.6 62.3 At2g46720 819284 KCS13 (3-KETOACYL-COA SYNTHASE 13) Encodes KCS13, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
25.2 99.6 14.6 At4g04760 825812 sugar transporter family protein F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA O.I. C.G. H.G.
24.6 99.6 44.0 At5g07510 830644 GRP14 encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
156.0	99.9	175.6	At4g37900	829946	glycine-rich protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVA	O.I.	C.G.	H.G.
155.6	99.9	135.2	At1g30020	839881	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
135.3	99.9	178.4	At1g06260	837137	cysteine proteinase, putative	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
134.6	99.9	76.7	At1g74540	843795	CYP98A8	member of CYP98A	O.I.	C.G.	H.G.
111.9	99.9	94.4	At4g14815	827138	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;P	O.I.	C.G.	H.G.
108.4	99.9	223.9	At1g67990	843127	TSM1	Encodes a tapetum-specific O-methyltransferase. In vitro enzyme assay indicated activity with caffeoyl-CoA, caffeoyl glucose, chlorogenic acid and polyamine conjugates. RNAi mutants had impaired silique development and seed setting.	O.I.	C.G.	H.G.
97.0	99.9	113.4	At2g03740	814901	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFA	O.I.	C.G.	H.G.
94.7	99.9	93.7	At1g20120	838601	family II extracellular lipase, putative	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV	O.I.	C.G.	H.G.
94.5	99.9	103.7	At5g16960	831559	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:response to oxidative stress;C:unknown;BOMFPA	O.I.	C.G.	H.G.
84.5	99.9	30.5	At1g79780	844317	-	F:molecular_function unknown;P:biological_process unknown;C:membrane;P	O.I.	C.G.	H.G.
84.1	99.9	98.5	At1g61110	842404	anac025 (Arabidopsis NAC domain containing protein 25)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
84.1	99.9	74.5	At1g75920	843925	family II extracellular lipase 5 (EXL5)	F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM	O.I.	C.G.	H.G.
83.5	99.9	36.8	At1g75790	843912	sks18 (SKU5 Similar 18)	F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA	O.I.	C.G.	H.G.
81.0	99.9	89.5	At5g48210	834874	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
77.6	99.9	115.2	At4g28395	828956	ATA7	related to lipid transfer proteins	O.I.	C.G.	H.G.
75.8	99.9	56.6	At2g19070	816424	SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE)	encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091)	O.I.	C.G.	H.G.
75.6	99.9	78.3	At1g62940	842596	ACOS5 (ACYL-COA SYNTHETASE 5)	encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.	O.I.	C.G.	H.G.
75.4	99.9	117.4	At2g03850	814911	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA	O.I.	C.G.	H.G.
75.2	99.9	282.8	At3g51590	824322	LTP12 (LIPID TRANSFER PROTEIN 12)	Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
74.2	99.9	236.3	At1g68875	843220	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
72.7	99.9	76.4	At1g28375	839734	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
70.8	99.9	203.3	At1g75910	843924	EXL4	member of Lipase proteins	O.I.	C.G.	H.G.
68.7	99.9	197.8	At5g62080	836328	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
67.2	99.8	79.4	At5g16920	831555	-	F:molecular_function unknown;P:unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
66.6	99.8	167.6	At1g33430	840236	galactosyltransferase family protein	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:pollen exine formation;C:endomembrane system, membrane;MPO	O.I.	C.G.	H.G.
63.9	99.8	56.5	At3g15270	820758	SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5)	Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.	O.I.	C.G.	H.G.
63.5	99.8	68.7	At1g13140	837871	CYP86C3	member of CYP86C	O.I.	C.G.	H.G.
62.0	99.8	72.5	At1g28430	839741	CYP705A24	member of CYP705A	O.I.	C.G.	H.G.
60.5	99.8	52.9	At5g65205	836644	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
58.1	99.8	41.9	At1g30350	839915	pectate lyase family protein	F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO	O.I.	C.G.	H.G.
57.6	99.8	68.4	At3g26125	822212	CYP86C2	encodes a protein with cytochrome P450 domain	O.I.	C.G.	H.G.
57.3	99.8	182.1	At1g75930	843926	EXL6	member of Lipase proteins	O.I.	C.G.	H.G.
57.0	99.8	229.0	At5g07560	830649	GRP20 (GLYCINE-RICH PROTEIN 20)	Lipid-binding oleosins, glycine-rich protein.	O.I.	C.G.	H.G.
55.9	99.8	162.0	At3g25050	822096	XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3)	encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment.	O.I.	C.G.	H.G.
55.9	99.8	18.9	At5g49070	834966	KCS21 (3-KETOACYL-COA SYNTHASE 21)	Encodes KCS21, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
54.6	99.8	53.2	At3g52160	824381	KCS15 (3-KETOACYL-COA SYNTHASE 15)	Encodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
54.1	99.8	127.8	At4g14080	827044	MEE48 (maternal effect embryo arrest 48)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;PO	O.I.	C.G.	H.G.
52.7	99.8	21.0	At1g26710	839212	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
52.5	99.8	54.3	At1g23570	838967	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
52.3	99.8	52.9	At5g07520	830645	GRP18 (GLYCINE-RICH PROTEIN 18)	encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12).	O.I.	C.G.	H.G.
52.1	99.8	146.7	At5g07230	830614	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
50.7	99.8	65.7	At1g69500	843283	electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding	F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAV	O.I.	C.G.	H.G.
49.6	99.8	19.5	At1g06990	837209	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
49.2	99.8	69.8	At1g02050	839280	chalcone and stilbene synthase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOF	O.I.	C.G.	H.G.
48.6	99.8	34.9	At3g06100	819783	NIP7	F:water channel activity;P:transport;C:membrane;BPMOFAV	O.I.	C.G.	H.G.
48.5	99.8	49.8	At5g13380	831179	auxin-responsive GH3 family protein	F:unknown;P:response to auxin stimulus;C:cellular_component unknown;OBPMF	O.I.	C.G.	H.G.
46.7	99.8	27.4	At1g71160	843456	KCS7 (3-KETOACYL-COA SYNTHASE 7)	Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
46.1	99.8	86.9	At4g20050	827750	QRT3 (QUARTET 3)	Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.	O.I.	C.G.	H.G.
44.7	99.8	31.9	At1g13150	837873	CYP86C4	member of CYP86C	O.I.	C.G.	H.G.
44.1	99.8	68.2	At2g41040	818703	methyltransferase-related	F:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFM	O.I.	C.G.	H.G.
42.9	99.8	40.1	At1g74550	843796	CYP98A9	member of CYP98A	O.I.	C.G.	H.G.
42.4	99.8	463.2	At3g15400	820779	ATA20	Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein.	O.I.	C.G.	H.G.
41.9	99.8	66.1	At3g59530	825122	strictosidine synthase family protein	F:strictosidine synthase activity;P:alkaloid biosynthetic process, pollen exine formation;C:endomembrane system;BPMOFA	O.I.	C.G.	H.G.
41.7	99.8	193.5	At1g75940	843927	ATA27	encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.	O.I.	C.G.	H.G.
40.7	99.8	23.4	At1g21540	838755	AMP-binding protein, putative	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
40.6	99.8	71.0	At1g68540	843183	oxidoreductase family protein	F:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
40.2	99.8	54.7	At5g55720	835666	pectate lyase family protein	F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO	O.I.	C.G.	H.G.
39.7	99.8	22.6	At1g23600	838970	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
38.6	99.8	22.5	At5g60500	836171	undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein	F:transferase activity, transferring alkyl or aryl (other than methyl) groups;P:unknown;C:unknown;BOFMAP	O.I.	C.G.	H.G.
38.2	99.8	76.0	At1g02813	839360	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
37.8	99.8	85.0	At4g35420	829695	dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family	F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV	O.I.	C.G.	H.G.
37.6	99.7	27.5	At3g13220	820512	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
36.5	99.7	404.1	At1g66850	843003	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
36.1	99.7	26.9	At3g57620	824931	glyoxal oxidase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOM	O.I.	C.G.	H.G.
35.5	99.7	23.3	At1g23520	838960	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
34.7	99.7	96.6	At5g07540	830647	GRP16 (GLYCINE-RICH PROTEIN 16)	encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12).	O.I.	C.G.	H.G.
34.6	99.7	238.4	At5g07530	830646	GRP17 (GLYCINE RICH PROTEIN 17)	encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.	O.I.	C.G.	H.G.
34.4	99.7	24.1	At3g14395	820661	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
34.3	99.7	30.7	At3g23770	821959	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO	O.I.	C.G.	H.G.
34.2	99.7	57.8	At1g12570	837814	glucose-methanol-choline (GMC) oxidoreductase family protein	F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVA	O.I.	C.G.	H.G.
34.0	99.7	94.1	At1g58430	842212	RXF26	Encodes an anther-specific proline-rich protein.	O.I.	C.G.	H.G.
34.0	99.7	80.5	At1g10640	837607	polygalacturonase	F:polygalacturonase activity;P:carbohydrate metabolic process;C:cellular_component unknown;FPBOMA	O.I.	C.G.	H.G.
33.6	99.7	113.5	At5g17340	831600	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
33.5	99.7	357.5	At5g07550	830648	GRP19 (GLYCINE-RICH PROTEIN 19)	member of Oleosin-like protein family	O.I.	C.G.	H.G.
33.3	99.7	46.2	At1g07340	837245	ATSTP2 (SUGAR TRANSPORTER 2)	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity;P:pollen development, monosaccharide transport;C:integral to plasma membrane, membrane;FBMPOA	O.I.	C.G.	H.G.
32.8	99.7	81.1	At3g52130	824377	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
32.8	99.7	38.5	At4g29980	829121	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
32.4	99.7	34.5	At1g08065	837324	ACA5 (ALPHA CARBONIC ANHYDRASE 5)	F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:endomembrane system;MBPOFV	O.I.	C.G.	H.G.
31.0	99.7	62.8	At4g34850	829637	chalcone and stilbene synthase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF	O.I.	C.G.	H.G.
30.8	99.7	67.7	At1g02190	839541	CER1 protein, putative	F:oxidoreductase activity, iron ion binding, catalytic activity;P:oxidation reduction, fatty acid biosynthetic process;C:endoplasmic reticulum;BOPFMV	O.I.	C.G.	H.G.
30.8	99.7	19.3	At2g18420	816357	-	Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein	O.I.	C.G.	H.G.
30.2	99.7	96.3	At4g19430	827684	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
29.9	99.7	23.8	At2g47010	819315	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
29.8	99.7	173.3	At2g04570	814999	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
29.4	99.7	274.1	At5g33370	833315	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
29.0	99.7	15.0	At1g06250	837135	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POFBMV	O.I.	C.G.	H.G.
28.0	99.7	240.0	At4g04460	825776	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPB	O.I.	C.G.	H.G.
27.6	99.7	209.6	At5g22430	832304	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
27.6	99.7	68.3	At3g07450	819933	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
27.5	99.7	35.0	At4g23660	828466	AtPPT1 (Arabidopsis thaliana polyprenyltransferase 1)	Encodes para-hydroxy benzoate polyprenyl diphosphate transferase. The enzyme was shown to be able to use a wide range of prenyl substrates : from GPP (C10) to decaprenyl diphosphate (C50).	O.I.	C.G.	H.G.
27.1	99.7	35.0	At4g14695	827120	unknown protein	F:unknown;P:biological_process unknown;C:mitochondrion;MFPO	O.I.	C.G.	H.G.
26.5	99.7	50.5	At3g11980	820372	MS2 (MALE STERILITY 2)	Similar to fatty acid reductases.	O.I.	C.G.	H.G.
26.4	99.7	67.0	At4g18960	827631	AG (AGAMOUS)	Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.	O.I.	C.G.	H.G.
26.3	99.7	20.4	At1g32780	840172	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV	O.I.	C.G.	H.G.
26.0	99.7	57.0	At3g42960	823352	ATA1 (ARABIDOPSIS TAPETUM 1)	Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.	O.I.	C.G.	H.G.
25.9	99.7	6.9	At3g54490	824614	RPB5E (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, E)	NRPE5-like protein of unknown function; homologous to budding yeast RPB5	O.I.	C.G.	H.G.
25.5	99.7	30.4	At4g16270	827322	peroxidase 40 (PER40) (P40)	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
25.2	99.6	62.3	At2g46720	819284	KCS13 (3-KETOACYL-COA SYNTHASE 13)	Encodes KCS13, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
25.2	99.6	14.6	At4g04760	825812	sugar transporter family protein	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA	O.I.	C.G.	H.G.
24.6	99.6	44.0	At5g07510	830644	GRP14	encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.	O.I.	C.G.	H.G.

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GSM ID	GSM128732
Assay name	Hennig_1-4_flower-buds-CK_021114_1_B_Rep2_ATH1
GSE experiment	GSE5526: Transcriptional Programs of Early Reproductive Stages in Arabidopsis

Microarray experiments to specifically-expressed genes

GSM ID GSM128732 Assay name Hennig_1-4_flower-buds-CK_021114_1_B_Rep2_ATH1 GSE experiment GSE5526: Transcriptional Programs of Early Reproductive Stages in Arabidopsis

GSM ID GSM128732

Assay name Hennig_1-4_flower-buds-CK_021114_1_B_Rep2_ATH1

GSE experiment GSE5526: Transcriptional Programs of Early Reproductive Stages in Arabidopsis