CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM128685

Assay name Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1

GSE experiment GSE5520: Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
141.9 99.9 88.8 At1g12940 837852 ATNRT2.5 (nitrate transporter2.5) member of High affinity nitrate transporter family O.I. C.G. H.G.
89.7 99.9 114.7 At4g23210 828420 protein kinase family protein Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid. O.I. C.G. H.G.
80.0 99.9 111.1 At1g64400 842748 long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative F:catalytic activity;P:fatty acid biosynthetic process;C:unknown;BOMFPAV O.I. C.G. H.G.
74.4 99.9 288.6 At4g12500 826862 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:unknown;POBMVFA O.I. C.G. H.G.
72.3 99.9 179.0 At2g19190 816436 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) Receptor-like protein kinase. Involved in early defense signaling. O.I. C.G. H.G.
70.1 99.9 46.3 At2g15080 815997 AtRLP19 (Receptor Like Protein 19) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
67.2 99.8 472.6 At2g43620 818964 chitinase, putative F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM O.I. C.G. H.G.
62.2 99.8 65.0 At2g25000 817039 WRKY60 Pathogen-induced transcription factor. Forms protein complexes with itself and with WRKY40. Coexpression with WRKY18 or WRKY40 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. O.I. C.G. H.G.
59.4 99.8 39.0 At4g25110 828614 AtMC2 (metacaspase 2) F:cysteine-type endopeptidase activity;P:proteolysis;C:unknown;POMFBVA O.I. C.G. H.G.
58.3 99.8 88.2 At1g51890 841616 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
56.0 99.8 447.1 At4g12490 826861 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:defense response to fungus, lipid transport;C:unknown;PBOMVFA O.I. C.G. H.G.
54.5 99.8 71.6 At1g61380 842432 SD1-29 (S-DOMAIN-1 29) F:carbohydrate binding, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
53.6 99.8 169.1 At1g35710 840475 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
50.8 99.8 42.0 At3g45290 823667 MLO3 (MILDEW RESISTANCE LOCUS O 3) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO3 belongs to the clade IV, with AtMLO2, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in primary root and lateral root primordia, in fruit abscission zone, in vascular system of cotyledons and in trichomes of young leaves,; it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). O.I. C.G. H.G.
50.7 99.8 102.4 At5g46050 834646 PTR3 (PEPTIDE TRANSPORTER 3) Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies. O.I. C.G. H.G.
49.8 99.8 116.9 At5g45380 834574 sodium:solute symporter family protein F:urea transmembrane transporter activity, solute:sodium symporter activity;P:cellular response to nitrogen starvation;C:plasma membrane;BOMFAP O.I. C.G. H.G.
48.2 99.8 258.1 At4g22470 828342 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
47.9 99.8 43.0 At1g64170 842721 ATCHX16 (CATION/H+ EXCHANGER 16) member of Putative Na+/H+ antiporter family O.I. C.G. H.G.
46.7 99.8 127.5 At1g10340 837573 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA O.I. C.G. H.G.
43.0 99.8 167.7 At2g17740 816283 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
42.9 99.8 25.3 At4g04220 825737 AtRLP46 (Receptor Like Protein 46) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
41.4 99.8 19.2 At2g25470 817085 AtRLP21 (Receptor Like Protein 21) F:protein binding;P:signal transduction;C:chloroplast;PMOBFAV O.I. C.G. H.G.
39.3 99.8 86.0 At5g01540 831722 LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1) Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. O.I. C.G. H.G.
37.9 99.8 62.0 At1g51790 841605 kinase F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
37.3 99.7 42.0 At4g23300 828429 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
36.8 99.7 84.2 At4g21120 827860 AAT1 (AMINO ACID TRANSPORTER 1) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. O.I. C.G. H.G.
36.1 99.7 38.9 At1g30410 839921 ATMRP13 member of MRP subfamily O.I. C.G. H.G.
36.0 99.7 107.3 At2g46430 819251 ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3) cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistance O.I. C.G. H.G.
36.0 99.7 58.4 At3g21080 821660 ABC transporter-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
33.2 99.7 69.1 At1g51850 841612 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
32.6 99.7 49.0 At4g01720 828001 WRKY47 member of WRKY Transcription Factor; Group II-b O.I. C.G. H.G.
32.2 99.7 393.6 At5g64120 836533 peroxidase, putative encodes a cell wall bound peroxidase that is induced by hypo-osmolarity O.I. C.G. H.G.
32.1 99.7 210.5 At1g71880 843519 SUC1 (Sucrose-proton symporter 1) Sucrose transporter gene induced in response to nematodes; member of Sucrose-proton symporter family. O.I. C.G. H.G.
31.3 99.7 85.0 At1g51800 841606 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
30.3 99.7 113.7 At3g22060 821768 receptor protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain O.I. C.G. H.G.
30.2 99.7 29.5 At5g39020 833894 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
29.8 99.7 47.9 At4g23220 828421 kinase F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
29.6 99.7 33.0 At1g66910 843009 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
29.5 99.7 102.4 At3g26210 822222 CYP71B23 putative cytochrome P450 O.I. C.G. H.G.
28.7 99.7 121.5 At2g39200 818505 MLO12 (MILDEW RESISTANCE LOCUS O 12) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). O.I. C.G. H.G.
28.6 99.7 287.1 At3g50480 824212 HR4 (HOMOLOG OF RPW8 4) Homolog of RPW8 O.I. C.G. H.G.
27.8 99.7 128.1 At3g46280 823773 protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBO O.I. C.G. H.G.
27.7 99.7 166.5 At4g08850 826456 kinase F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVA O.I. C.G. H.G.
26.5 99.7 61.1 At3g28540 822484 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAV O.I. C.G. H.G.
26.0 99.7 220.8 At2g01670 814696 atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17) F:hydrolase activity;P:biological_process unknown;C:unknown;MBPOF O.I. C.G. H.G.
25.5 99.7 203.2 At4g36670 829820 mannitol transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAV O.I. C.G. H.G.
25.5 99.7 45.6 At5g67450 836881 AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1) Encodes zinc-finger protein. mRNA levels are elevated in response to low temperature, cold temperatures and high salt. The protein is localized to the nucleus and acts as a transcriptional repressor. O.I. C.G. H.G.
25.1 99.6 64.7 At1g25390 839125 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
25.1 99.6 37.7 At2g02220 814753 PSKR1 (PHYTOSULFOKIN RECEPTOR 1) Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). O.I. C.G. H.G.
25.0 99.6 189.7 At2g39210 818506 nodulin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPFMA O.I. C.G. H.G.
24.6 99.6 215.0 At4g33050 829442 EDA39 (embryo sac development arrest 39) F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFO O.I. C.G. H.G.
24.5 99.6 62.5 At4g23290 828428 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:mitochondrion;MPOBFVA O.I. C.G. H.G.
24.4 99.6 343.5 At5g40780 834078 LHT1 Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. O.I. C.G. H.G.
24.2 99.6 32.1 At2g29120 817460 ATGLR2.7 member of Putative ligand-gated ion channel subunit family O.I. C.G. H.G.
24.2 99.6 20.7 At5g39030 833895 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
23.1 99.6 116.1 At5g53550 835437 YSL3 (YELLOW STRIPE LIKE 3) F:oligopeptide transporter activity;P:oligopeptide transport, response to nematode;C:unknown;BPFOAV O.I. C.G. H.G.
22.7 99.6 54.1 At5g61010 836222 ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
22.1 99.6 66.4 At3g47480 823902 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOB O.I. C.G. H.G.
21.8 99.6 35.1 At4g04500 825780 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
21.7 99.6 49.7 At4g23150 828414 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
21.5 99.6 35.0 At1g26420 839184 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA O.I. C.G. H.G.
21.3 99.6 243.3 At4g14365 827080 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA O.I. C.G. H.G.
20.7 99.6 47.1 At1g16260 838195 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVA O.I. C.G. H.G.
20.2 99.6 155.3 At5g48540 834910 33 kDa secretory protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
20.2 99.6 60.2 At3g25610 822148 haloacid dehalogenase-like hydrolase family protein F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAV O.I. C.G. H.G.
20.1 99.6 21.4 At1g22650 838871 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative F:catalytic activity, beta-fructofuranosidase activity;P:sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;OPB O.I. C.G. H.G.
19.9 99.6 90.8 At3g54420 824608 ATEP3 encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. O.I. C.G. H.G.
19.7 99.6 61.9 At1g70520 843389 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
19.7 99.6 15.9 At5g36930 833662 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAV O.I. C.G. H.G.
19.3 99.6 22.0 At4g23280 828427 protein kinase, putative F:kinase activity;P:defense response;C:chloroplast;MPOBFVA O.I. C.G. H.G.
19.1 99.6 172.3 At3g50950 824259 disease resistance protein (CC-NBS-LRR class), putative F:ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBFOVA O.I. C.G. H.G.
18.9 99.5 119.1 At3g23550 821934 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAM O.I. C.G. H.G.
18.7 99.5 160.8 At5g48380 834892 leucine-rich repeat family protein / protein kinase family protein F:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
18.5 99.5 36.7 At3g18370 821366 ATSYTF F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOF O.I. C.G. H.G.
18.4 99.5 223.9 At4g13510 826983 AMT1 Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake. O.I. C.G. H.G.
18.0 99.5 17.8 At5g38210 833803 serine/threonine protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
18.0 99.5 10.4 At4g25350 828638 SHB1 (SHORT HYPOCOTYL UNDER BLUE1) SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development. O.I. C.G. H.G.
17.8 99.5 20.5 At5g07770 830670 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:unknown;C:chloroplast;MPOFBVA O.I. C.G. H.G.
17.7 99.5 34.8 At5g61560 836277 protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVA O.I. C.G. H.G.
17.6 99.5 68.3 At3g63380 825513 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV O.I. C.G. H.G.
17.6 99.5 33.8 At1g74360 843777 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:mitochondrion;MPOBFVA O.I. C.G. H.G.
17.6 99.5 14.8 At4g00955 827942 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM O.I. C.G. H.G.
17.4 99.5 218.5 At2g37710 818348 RLK (receptor lectin kinase) Induced in response to Salicylic acid. O.I. C.G. H.G.
17.2 99.5 80.8 At4g23810 828481 WRKY53 member of WRKY Transcription Factor; Group III O.I. C.G. H.G.
17.1 99.5 19.8 At1g51270 841550 structural molecule/ transmembrane receptor F:transmembrane receptor activity, structural molecule activity;P:signal transduction, innate immune response;C:intrinsic to membrane;PMFO O.I. C.G. H.G.
17.0 99.5 137.8 At4g38550 830012 - F:unknown;P:unknown;C:chloroplast;MFPOBVA O.I. C.G. H.G.
16.7 99.5 92.1 At5g26920 832750 CBP60G (CAM-BINDING PROTEIN 60-LIKE.G) Encodes a calmodulin-binding protein CBP60g (calmodulin binding protein 60-like.g). The calmodulin-binding domain is located near the N-terminus; calmodulin binding is dependent on Ca(2+). Inducible by both bacterial pathogen and MAMP (microbe-associated molecular pattern) treatments. Bacterial growth is enhanced in cbp60g mutants. cbp60g mutants also show defects in salicylic acid (SA) accumulation and SA signaling. O.I. C.G. H.G.
16.7 99.5 86.1 At1g07000 837210 ATEXO70B2 (exocyst subunit EXO70 family protein B2) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
16.5 99.5 217.9 At5g26340 832703 MSS1 Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. O.I. C.G. H.G.
16.5 99.5 28.1 At5g53110 835391 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
16.5 99.5 13.9 At3g47090 823862 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:chloroplast;MPOBFVA O.I. C.G. H.G.
16.4 99.5 72.7 At5g58350 835947 WNK4 (WITH NO K (=LYSINE) 4) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. O.I. C.G. H.G.
16.4 99.5 19.2 At5g58940 836011 CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1) Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA O.I. C.G. H.G.
16.3 99.5 128.2 At4g01700 828131 chitinase, putative F:chitinase activity;P:cell wall macromolecule catabolic process;C:cell wall;PBOMVF O.I. C.G. H.G.
16.3 99.5 7.9 At5g48530 834909 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
16.2 99.5 36.3 At4g23260 828425 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:response to abscisic acid stimulus;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
16.1 99.5 36.3 At1g08050 837321 zinc finger (C3HC4-type RING finger) family protein F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:plasma membrane;BMOPFAV O.I. C.G. H.G.
16.0 99.5 19.2 At2g43850 818989 ankyrin protein kinase, putative (APK1) F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:regulation of signal transduction, protein amino acid phosphorylation;C:chloroplast;MOPBFVA O.I. C.G. H.G.
15.9 99.5 107.5 At5g57710 835878 heat shock protein-related F:protein binding;P:protein metabolic process;C:unknown;BOPFMA O.I. C.G. H.G.
15.8 99.5 62.4 At1g78290 844164 - - O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
141.9	99.9	88.8	At1g12940	837852	ATNRT2.5 (nitrate transporter2.5)	member of High affinity nitrate transporter family	O.I.	C.G.	H.G.
89.7	99.9	114.7	At4g23210	828420	protein kinase family protein	Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid.	O.I.	C.G.	H.G.
80.0	99.9	111.1	At1g64400	842748	long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative	F:catalytic activity;P:fatty acid biosynthetic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
74.4	99.9	288.6	At4g12500	826862	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:unknown;POBMVFA	O.I.	C.G.	H.G.
72.3	99.9	179.0	At2g19190	816436	FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1)	Receptor-like protein kinase. Involved in early defense signaling.	O.I.	C.G.	H.G.
70.1	99.9	46.3	At2g15080	815997	AtRLP19 (Receptor Like Protein 19)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
67.2	99.8	472.6	At2g43620	818964	chitinase, putative	F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM	O.I.	C.G.	H.G.
62.2	99.8	65.0	At2g25000	817039	WRKY60	Pathogen-induced transcription factor. Forms protein complexes with itself and with WRKY40. Coexpression with WRKY18 or WRKY40 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.	O.I.	C.G.	H.G.
59.4	99.8	39.0	At4g25110	828614	AtMC2 (metacaspase 2)	F:cysteine-type endopeptidase activity;P:proteolysis;C:unknown;POMFBVA	O.I.	C.G.	H.G.
58.3	99.8	88.2	At1g51890	841616	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
56.0	99.8	447.1	At4g12490	826861	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:defense response to fungus, lipid transport;C:unknown;PBOMVFA	O.I.	C.G.	H.G.
54.5	99.8	71.6	At1g61380	842432	SD1-29 (S-DOMAIN-1 29)	F:carbohydrate binding, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
53.6	99.8	169.1	At1g35710	840475	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
50.8	99.8	42.0	At3g45290	823667	MLO3 (MILDEW RESISTANCE LOCUS O 3)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO3 belongs to the clade IV, with AtMLO2, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in primary root and lateral root primordia, in fruit abscission zone, in vascular system of cotyledons and in trichomes of young leaves,; it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).	O.I.	C.G.	H.G.
50.7	99.8	102.4	At5g46050	834646	PTR3 (PEPTIDE TRANSPORTER 3)	Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.	O.I.	C.G.	H.G.
49.8	99.8	116.9	At5g45380	834574	sodium:solute symporter family protein	F:urea transmembrane transporter activity, solute:sodium symporter activity;P:cellular response to nitrogen starvation;C:plasma membrane;BOMFAP	O.I.	C.G.	H.G.
48.2	99.8	258.1	At4g22470	828342	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
47.9	99.8	43.0	At1g64170	842721	ATCHX16 (CATION/H+ EXCHANGER 16)	member of Putative Na+/H+ antiporter family	O.I.	C.G.	H.G.
46.7	99.8	127.5	At1g10340	837573	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA	O.I.	C.G.	H.G.
43.0	99.8	167.7	At2g17740	816283	DC1 domain-containing protein	F:unknown;P:unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
42.9	99.8	25.3	At4g04220	825737	AtRLP46 (Receptor Like Protein 46)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
41.4	99.8	19.2	At2g25470	817085	AtRLP21 (Receptor Like Protein 21)	F:protein binding;P:signal transduction;C:chloroplast;PMOBFAV	O.I.	C.G.	H.G.
39.3	99.8	86.0	At5g01540	831722	LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1)	Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.	O.I.	C.G.	H.G.
37.9	99.8	62.0	At1g51790	841605	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
37.3	99.7	42.0	At4g23300	828429	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
36.8	99.7	84.2	At4g21120	827860	AAT1 (AMINO ACID TRANSPORTER 1)	Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.	O.I.	C.G.	H.G.
36.1	99.7	38.9	At1g30410	839921	ATMRP13	member of MRP subfamily	O.I.	C.G.	H.G.
36.0	99.7	107.3	At2g46430	819251	ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3)	cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistance	O.I.	C.G.	H.G.
36.0	99.7	58.4	At3g21080	821660	ABC transporter-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
33.2	99.7	69.1	At1g51850	841612	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
32.6	99.7	49.0	At4g01720	828001	WRKY47	member of WRKY Transcription Factor; Group II-b	O.I.	C.G.	H.G.
32.2	99.7	393.6	At5g64120	836533	peroxidase, putative	encodes a cell wall bound peroxidase that is induced by hypo-osmolarity	O.I.	C.G.	H.G.
32.1	99.7	210.5	At1g71880	843519	SUC1 (Sucrose-proton symporter 1)	Sucrose transporter gene induced in response to nematodes; member of Sucrose-proton symporter family.	O.I.	C.G.	H.G.
31.3	99.7	85.0	At1g51800	841606	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
30.3	99.7	113.7	At3g22060	821768	receptor protein kinase-related	contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain	O.I.	C.G.	H.G.
30.2	99.7	29.5	At5g39020	833894	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
29.8	99.7	47.9	At4g23220	828421	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
29.6	99.7	33.0	At1g66910	843009	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
29.5	99.7	102.4	At3g26210	822222	CYP71B23	putative cytochrome P450	O.I.	C.G.	H.G.
28.7	99.7	121.5	At2g39200	818505	MLO12 (MILDEW RESISTANCE LOCUS O 12)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).	O.I.	C.G.	H.G.
28.6	99.7	287.1	At3g50480	824212	HR4 (HOMOLOG OF RPW8 4)	Homolog of RPW8	O.I.	C.G.	H.G.
27.8	99.7	128.1	At3g46280	823773	protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
27.7	99.7	166.5	At4g08850	826456	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVA	O.I.	C.G.	H.G.
26.5	99.7	61.1	At3g28540	822484	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
26.0	99.7	220.8	At2g01670	814696	atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17)	F:hydrolase activity;P:biological_process unknown;C:unknown;MBPOF	O.I.	C.G.	H.G.
25.5	99.7	203.2	At4g36670	829820	mannitol transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAV	O.I.	C.G.	H.G.
25.5	99.7	45.6	At5g67450	836881	AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)	Encodes zinc-finger protein. mRNA levels are elevated in response to low temperature, cold temperatures and high salt. The protein is localized to the nucleus and acts as a transcriptional repressor.	O.I.	C.G.	H.G.
25.1	99.6	64.7	At1g25390	839125	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
25.1	99.6	37.7	At2g02220	814753	PSKR1 (PHYTOSULFOKIN RECEPTOR 1)	Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).	O.I.	C.G.	H.G.
25.0	99.6	189.7	At2g39210	818506	nodulin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPFMA	O.I.	C.G.	H.G.
24.6	99.6	215.0	At4g33050	829442	EDA39 (embryo sac development arrest 39)	F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
24.5	99.6	62.5	At4g23290	828428	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:mitochondrion;MPOBFVA	O.I.	C.G.	H.G.
24.4	99.6	343.5	At5g40780	834078	LHT1	Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.	O.I.	C.G.	H.G.
24.2	99.6	32.1	At2g29120	817460	ATGLR2.7	member of Putative ligand-gated ion channel subunit family	O.I.	C.G.	H.G.
24.2	99.6	20.7	At5g39030	833895	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
23.1	99.6	116.1	At5g53550	835437	YSL3 (YELLOW STRIPE LIKE 3)	F:oligopeptide transporter activity;P:oligopeptide transport, response to nematode;C:unknown;BPFOAV	O.I.	C.G.	H.G.
22.7	99.6	54.1	At5g61010	836222	ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
22.1	99.6	66.4	At3g47480	823902	calcium-binding EF hand family protein	F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOB	O.I.	C.G.	H.G.
21.8	99.6	35.1	At4g04500	825780	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
21.7	99.6	49.7	At4g23150	828414	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
21.5	99.6	35.0	At1g26420	839184	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA	O.I.	C.G.	H.G.
21.3	99.6	243.3	At4g14365	827080	zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
20.7	99.6	47.1	At1g16260	838195	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVA	O.I.	C.G.	H.G.
20.2	99.6	155.3	At5g48540	834910	33 kDa secretory protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
20.2	99.6	60.2	At3g25610	822148	haloacid dehalogenase-like hydrolase family protein	F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAV	O.I.	C.G.	H.G.
20.1	99.6	21.4	At1g22650	838871	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative	F:catalytic activity, beta-fructofuranosidase activity;P:sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;OPB	O.I.	C.G.	H.G.
19.9	99.6	90.8	At3g54420	824608	ATEP3	encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.	O.I.	C.G.	H.G.
19.7	99.6	61.9	At1g70520	843389	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
19.7	99.6	15.9	At5g36930	833662	disease resistance protein (TIR-NBS-LRR class), putative	F:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAV	O.I.	C.G.	H.G.
19.3	99.6	22.0	At4g23280	828427	protein kinase, putative	F:kinase activity;P:defense response;C:chloroplast;MPOBFVA	O.I.	C.G.	H.G.
19.1	99.6	172.3	At3g50950	824259	disease resistance protein (CC-NBS-LRR class), putative	F:ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBFOVA	O.I.	C.G.	H.G.
18.9	99.5	119.1	At3g23550	821934	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAM	O.I.	C.G.	H.G.
18.7	99.5	160.8	At5g48380	834892	leucine-rich repeat family protein / protein kinase family protein	F:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
18.5	99.5	36.7	At3g18370	821366	ATSYTF	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOF	O.I.	C.G.	H.G.
18.4	99.5	223.9	At4g13510	826983	AMT1	Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.	O.I.	C.G.	H.G.
18.0	99.5	17.8	At5g38210	833803	serine/threonine protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
18.0	99.5	10.4	At4g25350	828638	SHB1 (SHORT HYPOCOTYL UNDER BLUE1)	SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development.	O.I.	C.G.	H.G.
17.8	99.5	20.5	At5g07770	830670	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:unknown;C:chloroplast;MPOFBVA	O.I.	C.G.	H.G.
17.7	99.5	34.8	At5g61560	836277	protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
17.6	99.5	68.3	At3g63380	825513	calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)	F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV	O.I.	C.G.	H.G.
17.6	99.5	33.8	At1g74360	843777	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:mitochondrion;MPOBFVA	O.I.	C.G.	H.G.
17.6	99.5	14.8	At4g00955	827942	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM	O.I.	C.G.	H.G.
17.4	99.5	218.5	At2g37710	818348	RLK (receptor lectin kinase)	Induced in response to Salicylic acid.	O.I.	C.G.	H.G.
17.2	99.5	80.8	At4g23810	828481	WRKY53	member of WRKY Transcription Factor; Group III	O.I.	C.G.	H.G.
17.1	99.5	19.8	At1g51270	841550	structural molecule/ transmembrane receptor	F:transmembrane receptor activity, structural molecule activity;P:signal transduction, innate immune response;C:intrinsic to membrane;PMFO	O.I.	C.G.	H.G.
17.0	99.5	137.8	At4g38550	830012	-	F:unknown;P:unknown;C:chloroplast;MFPOBVA	O.I.	C.G.	H.G.
16.7	99.5	92.1	At5g26920	832750	CBP60G (CAM-BINDING PROTEIN 60-LIKE.G)	Encodes a calmodulin-binding protein CBP60g (calmodulin binding protein 60-like.g). The calmodulin-binding domain is located near the N-terminus; calmodulin binding is dependent on Ca(2+). Inducible by both bacterial pathogen and MAMP (microbe-associated molecular pattern) treatments. Bacterial growth is enhanced in cbp60g mutants. cbp60g mutants also show defects in salicylic acid (SA) accumulation and SA signaling.	O.I.	C.G.	H.G.
16.7	99.5	86.1	At1g07000	837210	ATEXO70B2 (exocyst subunit EXO70 family protein B2)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
16.5	99.5	217.9	At5g26340	832703	MSS1	Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.	O.I.	C.G.	H.G.
16.5	99.5	28.1	At5g53110	835391	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
16.5	99.5	13.9	At3g47090	823862	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:chloroplast;MPOBFVA	O.I.	C.G.	H.G.
16.4	99.5	72.7	At5g58350	835947	WNK4 (WITH NO K (=LYSINE) 4)	Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.	O.I.	C.G.	H.G.
16.4	99.5	19.2	At5g58940	836011	CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1)	Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA	O.I.	C.G.	H.G.
16.3	99.5	128.2	At4g01700	828131	chitinase, putative	F:chitinase activity;P:cell wall macromolecule catabolic process;C:cell wall;PBOMVF	O.I.	C.G.	H.G.
16.3	99.5	7.9	At5g48530	834909	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
16.2	99.5	36.3	At4g23260	828425	ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:response to abscisic acid stimulus;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
16.1	99.5	36.3	At1g08050	837321	zinc finger (C3HC4-type RING finger) family protein	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:plasma membrane;BMOPFAV	O.I.	C.G.	H.G.
16.0	99.5	19.2	At2g43850	818989	ankyrin protein kinase, putative (APK1)	F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:regulation of signal transduction, protein amino acid phosphorylation;C:chloroplast;MOPBFVA	O.I.	C.G.	H.G.
15.9	99.5	107.5	At5g57710	835878	heat shock protein-related	F:protein binding;P:protein metabolic process;C:unknown;BOPFMA	O.I.	C.G.	H.G.
15.8	99.5	62.4	At1g78290	844164	-	-	O.I.	C.G.	H.G.

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GSM ID	GSM128685
Assay name	Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1
GSE experiment	GSE5520: Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction

Microarray experiments to specifically-expressed genes

GSM ID GSM128685 Assay name Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1 GSE experiment GSE5520: Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction

GSM ID GSM128685

Assay name Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1

GSE experiment GSE5520: Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction