CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM128676

Assay name Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1

GSE experiment GSE5520: Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
525.6 100.0 319.6 At3g11480 820321 BSMT1 The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism. O.I. C.G. H.G.
328.6 100.0 125.8 At2g47950 819407 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
326.0 100.0 131.0 At1g80110 844351 ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11) F:carbohydrate binding;P:unknown;C:nucleus;P O.I. C.G. H.G.
319.4 100.0 57.6 At3g43250 823400 cell cycle control protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB O.I. C.G. H.G.
306.7 100.0 218.5 At1g61120 842405 TPS04 (TERPENE SYNTHASE 04) Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum. O.I. C.G. H.G.
267.3 100.0 180.4 At1g19640 838551 JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE) Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment. O.I. C.G. H.G.
256.1 100.0 180.0 At3g46660 823819 UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
221.6 100.0 131.8 At5g60800 836201 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA O.I. C.G. H.G.
219.3 100.0 23.6 At4g37850 829941 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB O.I. C.G. H.G.
210.9 100.0 221.4 At1g13340 837894 unknown protein F:unknown;P:response to oxidative stress;C:unknown;MPFO O.I. C.G. H.G.
204.0 100.0 117.8 At4g23060 828405 IQD22 (IQ-domain 22) F:calmodulin binding;P:response to gibberellin stimulus;C:unknown;POMF O.I. C.G. H.G.
196.4 100.0 90.5 At2g43320 818933 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFB O.I. C.G. H.G.
192.2 100.0 258.6 At5g13320 831173 PBS3 (AVRPPHB SUSCEPTIBLE 3) Encodes PBS3 (avrPphB susceptible), also known as GDG1 (GH3-Like Defense Gene 1)， WIN3 (HopW1-1-Interacting 3). Involved in disease-resistance signaling pathway. Required for accumulation of salicylic acid, activation of defense responses and resistance to Pseudomonas syringae. Expression detected in cotyledons, true leaves, hypocotyls and occasionally in some parts of roots from 10-day-old seedlings. No expression was detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants. O.I. C.G. H.G.
151.9 99.9 314.4 At2g34070 817968 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
139.7 99.9 287.6 At3g47540 823908 chitinase, putative F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
133.6 99.9 301.1 At1g43160 840915 RAP2.6 (related to AP2 6) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily. O.I. C.G. H.G.
124.7 99.9 288.4 At1g51760 841602 IAR3 (IAA-ALANINE RESISTANT 3) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. O.I. C.G. H.G.
119.4 99.9 244.6 At5g13220 831162 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10) Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa. O.I. C.G. H.G.
119.4 99.9 181.3 At4g21680 828255 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOF O.I. C.G. H.G.
118.7 99.9 156.6 At3g43270 823402 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:plant-type cell wall;PBFM O.I. C.G. H.G.
117.9 99.9 164.3 At5g50570 835126 squamosa promoter-binding protein, putative F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM O.I. C.G. H.G.
117.0 99.9 280.7 At1g43910 840990 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
116.8 99.9 69.9 At1g72890 843620 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMO O.I. C.G. H.G.
115.2 99.9 184.5 At1g72940 843625 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PB O.I. C.G. H.G.
111.0 99.9 384.1 At4g37990 829955 ELI3-2 (ELICITOR-ACTIVATED GENE 3-2) Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. O.I. C.G. H.G.
111.0 99.9 113.2 At1g50640 841486 ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. O.I. C.G. H.G.
110.4 99.9 122.1 At1g29330 839807 ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2) Encodes a protein similar in sequence to animal and yeast endoplasmic reticulum retention signal receptor. This protein can functionally complement the yeast homologue. Transcript is detected in flower buds, stems, root, and leaves. O.I. C.G. H.G.
105.9 99.9 66.5 At1g25500 839136 choline transporter-related F:unknown;P:biological_process unknown;C:chloroplast;MFOP O.I. C.G. H.G.
105.3 99.9 334.3 At1g26770 839218 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
104.0 99.9 48.4 At3g57460 824913 catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding F:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;MBFPO O.I. C.G. H.G.
103.5 99.9 110.1 At4g29740 829096 CKX4 (CYTOKININ OXIDASE 4) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. O.I. C.G. H.G.
102.8 99.9 49.6 At3g26820 822297 esterase/lipase/thioesterase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:biological_process unknown;C:unknown;BPOMF O.I. C.G. H.G.
99.0 99.9 239.4 At5g07010 830592 ST2A (SULFOTRANSFERASE 2A) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor). O.I. C.G. H.G.
95.6 99.9 48.5 At2g38250 818404 DNA-binding protein-related F:transcription factor activity;P:regulation of transcription;C:nucleolus;MOFPBV O.I. C.G. H.G.
94.0 99.9 236.2 At2g27830 817330 - F:molecular_function unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
91.5 99.9 282.2 At3g48520 824011 CYP94B3 member of CYP94B O.I. C.G. H.G.
87.3 99.9 220.0 At3g55970 824763 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFM O.I. C.G. H.G.
84.8 99.9 42.2 At5g64530 836574 XND1 F:transcription factor activity;P:multicellular organismal development, shoot development, xylem histogenesis, programmed cell death;C:cellular_component unknown;P O.I. C.G. H.G.
82.6 99.9 393.7 At2g38240 818403 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:response to salt stress;C:unknown;POBFM O.I. C.G. H.G.
79.9 99.9 250.4 At3g06500 819828 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative F:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPB O.I. C.G. H.G.
79.5 99.9 83.8 At2g46510 819262 ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR) Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive. O.I. C.G. H.G.
78.8 99.9 59.2 At5g63450 836464 CYP94B1 member of CYP94B O.I. C.G. H.G.
78.2 99.9 135.0 At5g17760 831644 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:unknown;C:plasma membrane;BOMFPAV O.I. C.G. H.G.
77.5 99.9 103.9 At3g14060 820620 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;P O.I. C.G. H.G.
76.2 99.9 342.4 At3g60420 825213 - F:unknown;P:unknown;C:cellular_component unknown;OBFPM O.I. C.G. H.G.
75.9 99.9 79.4 At3g04000 819555 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
75.9 99.9 56.6 At5g64230 836544 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM O.I. C.G. H.G.
75.3 99.9 121.3 At3g50260 824188 CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
75.0 99.9 78.3 At1g08050 837321 zinc finger (C3HC4-type RING finger) family protein F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:plasma membrane;BMOPFAV O.I. C.G. H.G.
73.3 99.9 97.1 At1g76070 843939 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF O.I. C.G. H.G.
73.1 99.9 74.1 At5g57910 835902 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
71.9 99.9 26.2 At1g30850 839969 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
71.0 99.9 333.9 At5g05600 830443 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFM O.I. C.G. H.G.
70.6 99.9 69.3 At3g02875 821199 ILR1 (IAA-LEUCINE RESISTANT 1) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors. O.I. C.G. H.G.
70.2 99.9 83.3 At4g36780 829831 transcription regulator F:transcription regulator activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
70.0 99.9 180.0 At1g57630 842139 disease resistance protein (TIR class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P O.I. C.G. H.G.
69.6 99.9 451.0 At2g24850 817022 TAT3 (TYROSINE AMINOTRANSFERASE 3) Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid. O.I. C.G. H.G.
68.1 99.9 240.1 At5g01210 831901 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB O.I. C.G. H.G.
66.5 99.8 50.8 At3g14440 820667 NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. O.I. C.G. H.G.
66.4 99.8 135.6 At4g28300 828945 hydroxyproline-rich glycoprotein family protein Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall. O.I. C.G. H.G.
66.1 99.8 75.8 At1g06620 837171 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase O.I. C.G. H.G.
64.3 99.8 54.6 At1g61065 842398 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
64.2 99.8 71.9 At1g60730 842367 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:unknown;BOFMPA O.I. C.G. H.G.
64.0 99.8 293.5 At5g65380 836663 ripening-responsive protein, putative F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport, ripening;C:membrane;BPOFMA O.I. C.G. H.G.
63.6 99.8 241.3 At1g13990 837959 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
63.3 99.8 126.3 At2g29460 817495 ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
62.9 99.8 99.1 At2g15760 816070 calmodulin-binding protein F:calmodulin binding;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
61.9 99.8 228.1 At2g43820 818986 UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. O.I. C.G. H.G.
61.6 99.8 237.0 At4g31780 829306 MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1) Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. O.I. C.G. H.G.
59.9 99.8 110.9 At4g26060 828712 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
58.9 99.8 256.8 At1g70700 843407 TIFY7 JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. O.I. C.G. H.G.
58.7 99.8 81.4 At1g33960 840293 AIG1 (AVRRPT2-INDUCED GENE 1) Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 O.I. C.G. H.G.
58.2 99.8 55.2 At5g05140 830396 transcription elongation factor-related F:protein binding, transcription regulator activity, DNA binding;P:transcription;C:nucleus;MPOFB O.I. C.G. H.G.
57.6 99.8 66.4 At1g32870 840181 ANAC13 (Arabidopsis thaliana NAC domain protein 13) F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMF O.I. C.G. H.G.
56.3 99.8 134.5 At5g53050 835385 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOMPFAV O.I. C.G. H.G.
55.9 99.8 110.8 At1g33110 840207 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
55.8 99.8 139.3 At1g10340 837573 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA O.I. C.G. H.G.
55.8 99.8 15.6 At2g22200 816754 AP2 domain-containing transcription factor encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. O.I. C.G. H.G.
53.7 99.8 51.7 At1g28050 839698 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POAF O.I. C.G. H.G.
52.7 99.8 78.4 At1g19680 838555 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;OPMBF O.I. C.G. H.G.
51.7 99.8 140.7 At1g73800 - - O.I. C.G. H.G.
51.5 99.8 237.9 At1g52890 841722 ANAC019 (Arabidopsis NAC domain containing protein 19) encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro. O.I. C.G. H.G.
51.5 99.8 108.0 At2g23450 816877 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
51.3 99.8 221.1 At3g11340 820307 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF O.I. C.G. H.G.
51.1 99.8 145.7 At3g50910 824255 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMB O.I. C.G. H.G.
51.0 99.8 41.4 At1g69480 843280 EXS family protein / ERD1/XPR1/SYG1 family protein F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOB O.I. C.G. H.G.
50.8 99.8 157.0 At3g44720 823601 ADT4 (arogenate dehydratase 4) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identiﬁed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. O.I. C.G. H.G.
50.7 99.8 87.1 At2g29470 817496 ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
47.8 99.8 293.2 At5g51070 835180 ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1) ATP-dependent Clp protease regulatory subunit O.I. C.G. H.G.
47.6 99.8 146.1 At2g27500 817295 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, nucleus, cytoplasm;PFO O.I. C.G. H.G.
46.9 99.8 378.3 At1g19670 838554 ATCLH1 (ARABIDOPSIS THALIANA CORONATINE-INDUCED PROTEIN 1) Chlorophyllase is the first enzyme involved in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to yield chlorophyllide and phytol. AtCLH1 lacks a typical signal sequence for the chloroplast. Its expression is induced rapidly by methyljasmonate, a known promoter of senescence and chlorophyll degradation. O.I. C.G. H.G.
46.8 99.8 25.4 At5g67190 836854 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
46.6 99.8 37.2 At3g11580 820331 DNA-binding protein, putative F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
46.0 99.8 155.1 At3g07700 819961 ABC1 family protein F:unknown;P:unknown;C:chloroplast;OBMPFAV O.I. C.G. H.G.
45.6 99.8 262.7 At2g39030 818489 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
45.3 99.8 65.5 At3g21080 821660 ABC transporter-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
44.3 99.8 161.3 At1g53560 841791 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
43.8 99.8 303.3 At4g27410 828849 RD26 (RESPONSIVE TO DESICCATION 26) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response. O.I. C.G. H.G.
43.8 99.8 134.5 At1g27300 839619 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO O.I. C.G. H.G.
43.8 99.8 78.2 At5g04250 830304 OTU-like cysteine protease family protein F:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MPOFVB O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
525.6	100.0	319.6	At3g11480	820321	BSMT1	The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.	O.I.	C.G.	H.G.
328.6	100.0	125.8	At2g47950	819407	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
326.0	100.0	131.0	At1g80110	844351	ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11)	F:carbohydrate binding;P:unknown;C:nucleus;P	O.I.	C.G.	H.G.
319.4	100.0	57.6	At3g43250	823400	cell cycle control protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB	O.I.	C.G.	H.G.
306.7	100.0	218.5	At1g61120	842405	TPS04 (TERPENE SYNTHASE 04)	Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum.	O.I.	C.G.	H.G.
267.3	100.0	180.4	At1g19640	838551	JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE)	Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment.	O.I.	C.G.	H.G.
256.1	100.0	180.0	At3g46660	823819	UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12)	F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
221.6	100.0	131.8	At5g60800	836201	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA	O.I.	C.G.	H.G.
219.3	100.0	23.6	At4g37850	829941	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB	O.I.	C.G.	H.G.
210.9	100.0	221.4	At1g13340	837894	unknown protein	F:unknown;P:response to oxidative stress;C:unknown;MPFO	O.I.	C.G.	H.G.
204.0	100.0	117.8	At4g23060	828405	IQD22 (IQ-domain 22)	F:calmodulin binding;P:response to gibberellin stimulus;C:unknown;POMF	O.I.	C.G.	H.G.
196.4	100.0	90.5	At2g43320	818933	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFB	O.I.	C.G.	H.G.
192.2	100.0	258.6	At5g13320	831173	PBS3 (AVRPPHB SUSCEPTIBLE 3)	Encodes PBS3 (avrPphB susceptible), also known as GDG1 (GH3-Like Defense Gene 1)， WIN3 (HopW1-1-Interacting 3). Involved in disease-resistance signaling pathway. Required for accumulation of salicylic acid, activation of defense responses and resistance to Pseudomonas syringae. Expression detected in cotyledons, true leaves, hypocotyls and occasionally in some parts of roots from 10-day-old seedlings. No expression was detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants.	O.I.	C.G.	H.G.
151.9	99.9	314.4	At2g34070	817968	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
139.7	99.9	287.6	At3g47540	823908	chitinase, putative	F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
133.6	99.9	301.1	At1g43160	840915	RAP2.6 (related to AP2 6)	encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.	O.I.	C.G.	H.G.
124.7	99.9	288.4	At1g51760	841602	IAR3 (IAA-ALANINE RESISTANT 3)	encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.	O.I.	C.G.	H.G.
119.4	99.9	244.6	At5g13220	831162	JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)	Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa.	O.I.	C.G.	H.G.
119.4	99.9	181.3	At4g21680	828255	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOF	O.I.	C.G.	H.G.
118.7	99.9	156.6	At3g43270	823402	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:plant-type cell wall;PBFM	O.I.	C.G.	H.G.
117.9	99.9	164.3	At5g50570	835126	squamosa promoter-binding protein, putative	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM	O.I.	C.G.	H.G.
117.0	99.9	280.7	At1g43910	840990	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
116.8	99.9	69.9	At1g72890	843620	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMO	O.I.	C.G.	H.G.
115.2	99.9	184.5	At1g72940	843625	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PB	O.I.	C.G.	H.G.
111.0	99.9	384.1	At4g37990	829955	ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)	Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity.	O.I.	C.G.	H.G.
111.0	99.9	113.2	At1g50640	841486	ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)	encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.	O.I.	C.G.	H.G.
110.4	99.9	122.1	At1g29330	839807	ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2)	Encodes a protein similar in sequence to animal and yeast endoplasmic reticulum retention signal receptor. This protein can functionally complement the yeast homologue. Transcript is detected in flower buds, stems, root, and leaves.	O.I.	C.G.	H.G.
105.9	99.9	66.5	At1g25500	839136	choline transporter-related	F:unknown;P:biological_process unknown;C:chloroplast;MFOP	O.I.	C.G.	H.G.
105.3	99.9	334.3	At1g26770	839218	ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10)	Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
104.0	99.9	48.4	At3g57460	824913	catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding	F:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;MBFPO	O.I.	C.G.	H.G.
103.5	99.9	110.1	At4g29740	829096	CKX4 (CYTOKININ OXIDASE 4)	It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.	O.I.	C.G.	H.G.
102.8	99.9	49.6	At3g26820	822297	esterase/lipase/thioesterase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:biological_process unknown;C:unknown;BPOMF	O.I.	C.G.	H.G.
99.0	99.9	239.4	At5g07010	830592	ST2A (SULFOTRANSFERASE 2A)	Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).	O.I.	C.G.	H.G.
95.6	99.9	48.5	At2g38250	818404	DNA-binding protein-related	F:transcription factor activity;P:regulation of transcription;C:nucleolus;MOFPBV	O.I.	C.G.	H.G.
94.0	99.9	236.2	At2g27830	817330	-	F:molecular_function unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
91.5	99.9	282.2	At3g48520	824011	CYP94B3	member of CYP94B	O.I.	C.G.	H.G.
87.3	99.9	220.0	At3g55970	824763	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
84.8	99.9	42.2	At5g64530	836574	XND1	F:transcription factor activity;P:multicellular organismal development, shoot development, xylem histogenesis, programmed cell death;C:cellular_component unknown;P	O.I.	C.G.	H.G.
82.6	99.9	393.7	At2g38240	818403	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity;P:response to salt stress;C:unknown;POBFM	O.I.	C.G.	H.G.
79.9	99.9	250.4	At3g06500	819828	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative	F:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPB	O.I.	C.G.	H.G.
79.5	99.9	83.8	At2g46510	819262	ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR)	Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.	O.I.	C.G.	H.G.
78.8	99.9	59.2	At5g63450	836464	CYP94B1	member of CYP94B	O.I.	C.G.	H.G.
78.2	99.9	135.0	At5g17760	831644	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:unknown;C:plasma membrane;BOMFPAV	O.I.	C.G.	H.G.
77.5	99.9	103.9	At3g14060	820620	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;P	O.I.	C.G.	H.G.
76.2	99.9	342.4	At3g60420	825213	-	F:unknown;P:unknown;C:cellular_component unknown;OBFPM	O.I.	C.G.	H.G.
75.9	99.9	79.4	At3g04000	819555	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
75.9	99.9	56.6	At5g64230	836544	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM	O.I.	C.G.	H.G.
75.3	99.9	121.3	At3g50260	824188	CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
75.0	99.9	78.3	At1g08050	837321	zinc finger (C3HC4-type RING finger) family protein	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:plasma membrane;BMOPFAV	O.I.	C.G.	H.G.
73.3	99.9	97.1	At1g76070	843939	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF	O.I.	C.G.	H.G.
73.1	99.9	74.1	At5g57910	835902	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
71.9	99.9	26.2	At1g30850	839969	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
71.0	99.9	333.9	At5g05600	830443	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFM	O.I.	C.G.	H.G.
70.6	99.9	69.3	At3g02875	821199	ILR1 (IAA-LEUCINE RESISTANT 1)	Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.	O.I.	C.G.	H.G.
70.2	99.9	83.3	At4g36780	829831	transcription regulator	F:transcription regulator activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
70.0	99.9	180.0	At1g57630	842139	disease resistance protein (TIR class), putative	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P	O.I.	C.G.	H.G.
69.6	99.9	451.0	At2g24850	817022	TAT3 (TYROSINE AMINOTRANSFERASE 3)	Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid.	O.I.	C.G.	H.G.
68.1	99.9	240.1	At5g01210	831901	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB	O.I.	C.G.	H.G.
66.5	99.8	50.8	At3g14440	820667	NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3)	Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane.	O.I.	C.G.	H.G.
66.4	99.8	135.6	At4g28300	828945	hydroxyproline-rich glycoprotein family protein	Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall.	O.I.	C.G.	H.G.
66.1	99.8	75.8	At1g06620	837171	2-oxoglutarate-dependent dioxygenase, putative	encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase	O.I.	C.G.	H.G.
64.3	99.8	54.6	At1g61065	842398	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
64.2	99.8	71.9	At1g60730	842367	aldo/keto reductase family protein	F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:unknown;BOFMPA	O.I.	C.G.	H.G.
64.0	99.8	293.5	At5g65380	836663	ripening-responsive protein, putative	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport, ripening;C:membrane;BPOFMA	O.I.	C.G.	H.G.
63.6	99.8	241.3	At1g13990	837959	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
63.3	99.8	126.3	At2g29460	817495	ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
62.9	99.8	99.1	At2g15760	816070	calmodulin-binding protein	F:calmodulin binding;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
61.9	99.8	228.1	At2g43820	818986	UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2)	Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques.	O.I.	C.G.	H.G.
61.6	99.8	237.0	At4g31780	829306	MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1)	Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis.	O.I.	C.G.	H.G.
59.9	99.8	110.9	At4g26060	828712	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
58.9	99.8	256.8	At1g70700	843407	TIFY7	JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.	O.I.	C.G.	H.G.
58.7	99.8	81.4	At1g33960	840293	AIG1 (AVRRPT2-INDUCED GENE 1)	Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2	O.I.	C.G.	H.G.
58.2	99.8	55.2	At5g05140	830396	transcription elongation factor-related	F:protein binding, transcription regulator activity, DNA binding;P:transcription;C:nucleus;MPOFB	O.I.	C.G.	H.G.
57.6	99.8	66.4	At1g32870	840181	ANAC13 (Arabidopsis thaliana NAC domain protein 13)	F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
56.3	99.8	134.5	At5g53050	835385	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:unknown;C:unknown;BOMPFAV	O.I.	C.G.	H.G.
55.9	99.8	110.8	At1g33110	840207	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
55.8	99.8	139.3	At1g10340	837573	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA	O.I.	C.G.	H.G.
55.8	99.8	15.6	At2g22200	816754	AP2 domain-containing transcription factor	encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.	O.I.	C.G.	H.G.
53.7	99.8	51.7	At1g28050	839698	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POAF	O.I.	C.G.	H.G.
52.7	99.8	78.4	At1g19680	838555	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;OPMBF	O.I.	C.G.	H.G.
51.7	99.8	140.7	At1g73800		-	-	O.I.	C.G.	H.G.
51.5	99.8	237.9	At1g52890	841722	ANAC019 (Arabidopsis NAC domain containing protein 19)	encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.	O.I.	C.G.	H.G.
51.5	99.8	108.0	At2g23450	816877	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
51.3	99.8	221.1	At3g11340	820307	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF	O.I.	C.G.	H.G.
51.1	99.8	145.7	At3g50910	824255	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMB	O.I.	C.G.	H.G.
51.0	99.8	41.4	At1g69480	843280	EXS family protein / ERD1/XPR1/SYG1 family protein	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOB	O.I.	C.G.	H.G.
50.8	99.8	157.0	At3g44720	823601	ADT4 (arogenate dehydratase 4)	Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identiﬁed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].	O.I.	C.G.	H.G.
50.7	99.8	87.1	At2g29470	817496	ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
47.8	99.8	293.2	At5g51070	835180	ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)	ATP-dependent Clp protease regulatory subunit	O.I.	C.G.	H.G.
47.6	99.8	146.1	At2g27500	817295	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, nucleus, cytoplasm;PFO	O.I.	C.G.	H.G.
46.9	99.8	378.3	At1g19670	838554	ATCLH1 (ARABIDOPSIS THALIANA CORONATINE-INDUCED PROTEIN 1)	Chlorophyllase is the first enzyme involved in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to yield chlorophyllide and phytol. AtCLH1 lacks a typical signal sequence for the chloroplast. Its expression is induced rapidly by methyljasmonate, a known promoter of senescence and chlorophyll degradation.	O.I.	C.G.	H.G.
46.8	99.8	25.4	At5g67190	836854	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
46.6	99.8	37.2	At3g11580	820331	DNA-binding protein, putative	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
46.0	99.8	155.1	At3g07700	819961	ABC1 family protein	F:unknown;P:unknown;C:chloroplast;OBMPFAV	O.I.	C.G.	H.G.
45.6	99.8	262.7	At2g39030	818489	GCN5-related N-acetyltransferase (GNAT) family protein	F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
45.3	99.8	65.5	At3g21080	821660	ABC transporter-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
44.3	99.8	161.3	At1g53560	841791	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
43.8	99.8	303.3	At4g27410	828849	RD26 (RESPONSIVE TO DESICCATION 26)	Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.	O.I.	C.G.	H.G.
43.8	99.8	134.5	At1g27300	839619	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO	O.I.	C.G.	H.G.
43.8	99.8	78.2	At5g04250	830304	OTU-like cysteine protease family protein	F:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MPOFVB	O.I.	C.G.	H.G.

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GSM ID	GSM128676
Assay name	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1
GSE experiment	GSE5520: Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction

Microarray experiments to specifically-expressed genes

GSM ID GSM128676 Assay name Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1 GSE experiment GSE5520: Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction

GSM ID GSM128676

Assay name Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1

GSE experiment GSE5520: Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction