CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM106917

Assay name opr3_JA_22 hrs_Rep3

GSE experiment GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
887.2 100.0 93.4 At4g16730 827376 lyase/ magnesium ion binding F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POB O.I. C.G. H.G.
833.3 100.0 219.7 At4g34510 829602 KCS17 (3-KETOACYL-COA SYNTHASE 17) Encodes KCS17, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
502.0 100.0 121.1 At2g15340 816025 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBFOPA O.I. C.G. H.G.
472.4 100.0 216.1 At4g25010 828604 nodulin MtN3 family protein F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMO O.I. C.G. H.G.
440.9 100.0 125.1 At3g60780 825249 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
371.8 100.0 155.7 At4g13790 827013 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus, response to red light, response to far red light;C:unknown;PO O.I. C.G. H.G.
366.1 100.0 170.9 At5g24655 832537 LSU4 (RESPONSE TO LOW SULFUR 4) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
361.8 100.0 380.8 At1g77590 844094 LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9) Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids. O.I. C.G. H.G.
352.1 100.0 204.7 At3g11430 820316 GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester. O.I. C.G. H.G.
326.2 100.0 75.4 At4g39130 830068 dehydrin family protein F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMO O.I. C.G. H.G.
308.7 100.0 253.9 At5g46940 834740 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
302.6 100.0 290.6 At3g22910 821863 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13) F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV O.I. C.G. H.G.
281.9 100.0 99.0 At3g57510 824918 ADPG1 Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding. O.I. C.G. H.G.
260.4 100.0 111.7 At3g06490 819827 MYB108 (myb domain protein 108) putative transcription factor MYB108 (MYB108) mRNA, O.I. C.G. H.G.
257.1 100.0 77.3 At3g07840 819975 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
234.2 100.0 155.6 At3g53510 824519 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV O.I. C.G. H.G.
233.1 100.0 55.8 At1g13130 837870 glycosyl hydrolase family 5 protein / cellulase family protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BPFO O.I. C.G. H.G.
221.8 100.0 274.9 At5g65870 836716 ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR) Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor. O.I. C.G. H.G.
192.5 100.0 79.6 At5g40350 834033 MYB24 (myb domain protein 24) Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I. C.G. H.G.
191.3 100.0 76.8 At4g17690 827489 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
164.5 100.0 50.8 At3g28770 822509 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOBFPVA O.I. C.G. H.G.
157.6 99.9 121.0 At1g59640 842254 ZCW32 A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS. O.I. C.G. H.G.
148.8 99.9 318.6 At1g73220 843656 AtOCT1 (Arabidopsis thaliana ORGANIC CATION/CARNITINE TRANSPORTER1) F:carnitine transporter activity, transporter activity, carbohydrate transmembrane transporter activity;P:unknown;C:plasma membrane, membrane;BMFPOA O.I. C.G. H.G.
147.3 99.9 124.2 At1g09380 837460 integral membrane family protein / nodulin MtN21-related F:unknown;P:unknown;C:endomembrane system, membrane;BOPAMF O.I. C.G. H.G.
146.6 99.9 257.5 At4g01470 828051 TIP1 Encodes AtTIP1;3, functions as water and urea channels in pollen. O.I. C.G. H.G.
144.4 99.9 58.3 At1g75300 843867 isoflavone reductase, putative encodes a protein whose sequence is similar to an isoflavone reductase O.I. C.G. H.G.
141.2 99.9 121.0 At3g10460 820210 self-incompatibility protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
137.5 99.9 97.2 At3g07830 819974 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMA O.I. C.G. H.G.
135.2 99.9 125.4 At3g27810 822401 ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I. C.G. H.G.
133.3 99.9 136.7 At5g50800 835152 nodulin MtN3 family protein F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMO O.I. C.G. H.G.
131.3 99.9 169.8 At2g45580 819166 CYP76C3 member of CYP76C O.I. C.G. H.G.
130.1 99.9 122.5 At1g61110 842404 anac025 (Arabidopsis NAC domain containing protein 25) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
128.5 99.9 46.9 At2g19010 816418 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
124.7 99.9 277.8 At1g52680 841700 late embryogenesis abundant protein-related / LEA protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
120.8 99.9 253.6 At5g59120 836030 ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13) F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
119.1 99.9 450.6 At4g24380 828540 unknown protein F:unknown;P:10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process;C:unknown;FMPOB O.I. C.G. H.G.
118.8 99.9 146.8 At5g13580 831202 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPV O.I. C.G. H.G.
118.0 99.9 259.1 At4g25040 828607 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
115.9 99.9 75.8 At4g10850 826682 nodulin MtN3 family protein F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOB O.I. C.G. H.G.
113.9 99.9 230.7 At4g13230 826939 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PMBOF O.I. C.G. H.G.
113.7 99.9 76.3 At3g51070 824271 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:unknown;MOBFPVA O.I. C.G. H.G.
112.8 99.9 110.7 At1g21140 838710 nodulin, putative F:unknown;P:biological_process unknown;C:unknown;BOPFA O.I. C.G. H.G.
111.7 99.9 56.4 At3g46750 823828 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
111.0 99.9 167.9 At3g14560 820682 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
110.2 99.9 47.5 At1g29230 839797 CIPK18 (CBL-INTERACTING PROTEIN KINASE 18) Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.20), which has also been reported as a member of the CBL-interacting protein kinases (CIPK18). O.I. C.G. H.G.
110.1 99.9 23.2 At1g42560 840861 MLO9 (MILDEW RESISTANCE LOCUS O 9) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO9 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO10. The gene is expressed during early seedling growth, in cotyledon vascular system, in flowers (with strong expression in anthers) in siliques and fruit abscission zone; not expressed in roots, or in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). O.I. C.G. H.G.
109.0 99.9 117.9 At5g62750 836396 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA O.I. C.G. H.G.
102.7 99.9 368.8 At3g28840 822516 unknown protein F:unknown;P:unknown;C:endomembrane system;BOMPFVA O.I. C.G. H.G.
101.9 99.9 115.8 At3g52620 824428 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
101.6 99.9 21.4 At1g68090 843137 ANN5 Encodes a calcium-binding protein annexin (AnnAt5). O.I. C.G. H.G.
99.8 99.9 33.5 At5g61700 836292 ATATH16 member of ATH subfamily O.I. C.G. H.G.
98.1 99.9 250.8 At2g19000 816417 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM O.I. C.G. H.G.
97.9 99.9 36.2 At5g08250 830721 cytochrome P450 family protein F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:cellular_component unknown;MPFBOAV O.I. C.G. H.G.
96.9 99.9 138.0 At1g73630 843697 calcium-binding protein, putative F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOB O.I. C.G. H.G.
96.3 99.9 49.5 At2g15535 816046 LCR10 (Low-molecular-weight cysteine-rich 10) F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
95.6 99.9 127.7 At4g08290 826383 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;BPOAMF O.I. C.G. H.G.
95.5 99.9 102.8 At1g54570 841899 esterase/lipase/thioesterase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:unknown;C:chloroplast, plastoglobule;BMPOF O.I. C.G. H.G.
95.1 99.9 83.7 At4g15980 827282 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:apoplast, plant-type cell wall;BMOPFAV O.I. C.G. H.G.
94.7 99.9 101.2 At1g26480 839189 GRF12 (GENERAL REGULATORY FACTOR 12) 14-3-3 protein GF14iota (grf12) O.I. C.G. H.G.
94.6 99.9 139.2 At3g01250 821184 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOP O.I. C.G. H.G.
94.4 99.9 283.2 At4g11760 826782 LCR17 (Low-molecular-weight cysteine-rich 17) Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. O.I. C.G. H.G.
91.7 99.9 108.8 At3g22740 821845 HMT3 homocysteine S-methyltransferase (HMT3) O.I. C.G. H.G.
89.5 99.9 72.5 At5g36260 833623 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFO O.I. C.G. H.G.
89.4 99.9 101.9 At1g04670 839451 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PAF O.I. C.G. H.G.
88.9 99.9 98.0 At5g17480 831614 APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1) F:calcium ion binding;P:biological_process unknown;C:cytoplasm;MPFOB O.I. C.G. H.G.
88.5 99.9 35.5 At3g03080 821128 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOFMPA O.I. C.G. H.G.
88.3 99.9 348.7 At5g53820 835463 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
86.5 99.9 145.0 At3g23410 821922 alcohol oxidase-related Encodes a fatty alcohol oxidase. O.I. C.G. H.G.
86.4 99.9 122.7 At3g60570 825228 ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
86.3 99.9 22.8 At3g55190 824685 esterase/lipase/thioesterase family protein F:catalytic activity;P:glycerol biosynthetic process;C:cellular_component unknown;BOPMFVA O.I. C.G. H.G.
85.6 99.9 179.0 At3g43960 823513 cysteine proteinase, putative F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:anchored to membrane;MOPVBAF O.I. C.G. H.G.
85.5 99.9 235.1 At2g19770 816496 PRF5 (PROFILIN5) Encodes profilin 5, originally named profilin 4 (PRO4/PFN4). Low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Pollen-specific plant profilin present predominantly in mature pollen and growing pollen tubes. O.I. C.G. H.G.
84.5 99.9 98.3 At1g74000 843738 SS3 (STRICTOSIDINE SYNTHASE 3) encodes a protein similar to strictosidine synthase, which is involved in the production of monoterpene indole alkaloids. This gene belongs to a family of 13 members in Arabidopsis. O.I. C.G. H.G.
84.0 99.9 220.7 At2g46860 819299 AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3) Encodes a protein that might have inorganic pyrophosphatase activity. O.I. C.G. H.G.
83.4 99.9 227.4 At4g29340 829055 PRF4 (PROFILIN 4) Profilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining. O.I. C.G. H.G.
82.7 99.9 62.3 At1g57550 842130 hydrophobic protein, putative / low temperature and salt responsive protein, putative F:unknown;P:hyperosmotic salinity response, response to cold;C:endomembrane system, integral to membrane;BPFMO O.I. C.G. H.G.
82.5 99.9 26.8 At1g79250 844265 AGC1.7 (AGC KINASE 1.7) F:kinase activity;P:pollen tube growth, unidimensional cell growth;C:unknown;MOPFBVA O.I. C.G. H.G.
79.4 99.9 55.3 At5g46200 834662 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PF O.I. C.G. H.G.
79.3 99.9 262.3 At3g28810 822513 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMBFPVA O.I. C.G. H.G.
79.3 99.9 66.9 At5g25880 832657 ATNADP-ME3 (NADP-malic enzyme 3) The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals. O.I. C.G. H.G.
78.9 99.9 14.9 At2g30240 817574 ATCHX13 Encodes a plasma membrane localized potassium transporter. O.I. C.G. H.G.
78.5 99.9 71.6 At4g25950 828701 VATG3 (vacuolar ATP synthase G3) V-ATPase G-subunit like protein O.I. C.G. H.G.
78.0 99.9 194.4 At5g09550 830814 RAB GDP-dissociation inhibitor F:RAB GDP-dissociation inhibitor activity;P:regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPB O.I. C.G. H.G.
78.0 99.9 50.8 At2g10970 815562 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
76.7 99.9 264.7 At5g07420 830633 pectinesterase family protein F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
76.4 99.9 18.3 At5g37060 833677 ATCHX24 member of Putative Na+/H+ antiporter family O.I. C.G. H.G.
75.6 99.9 83.8 At4g31330 829260 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO O.I. C.G. H.G.
75.0 99.9 121.4 At1g22640 838870 MYB3 (MYB DOMAIN PROTEIN 3) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression O.I. C.G. H.G.
73.9 99.9 43.9 At2g04675 815010 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
73.9 99.9 22.2 At2g45610 819169 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BPOFMAV O.I. C.G. H.G.
73.8 99.9 51.4 At4g10440 826636 dehydration-responsive family protein F:unknown;P:unknown;C:unknown;PBOA O.I. C.G. H.G.
73.4 99.9 37.2 At2g13620 815847 ATCHX15 member of Putative Na+/H+ antiporter family O.I. C.G. H.G.
72.6 99.9 28.0 At4g36770 829830 UDP-glycosyltransferase/ transferase, transferring glycosyl groups F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
72.4 99.9 188.2 At3g10340 820196 PAL4 (Phenylalanine ammonia-lyase 4) F:ammonia-lyase activity, ammonia ligase activity, catalytic activity;P:L-phenylalanine catabolic process, biosynthetic process;C:cytoplasm;BPOFMA O.I. C.G. H.G.
70.9 99.9 24.2 At5g19610 832081 sec7 domain-containing protein F:ARF guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPB O.I. C.G. H.G.
70.8 99.9 48.7 At4g12410 826850 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
69.8 99.9 20.2 At5g64690 836590 neurofilament triplet H protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
68.6 99.9 122.6 At2g29790 817529 - Encodes a Maternally expressed gene (MEG) family protein [pseudogene] O.I. C.G. H.G.
68.1 99.9 514.4 At3g28830 822515 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;MOBFPVA O.I. C.G. H.G.
67.9 99.9 391.8 At3g28980 822538 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
887.2	100.0	93.4	At4g16730	827376	lyase/ magnesium ion binding	F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POB	O.I.	C.G.	H.G.
833.3	100.0	219.7	At4g34510	829602	KCS17 (3-KETOACYL-COA SYNTHASE 17)	Encodes KCS17, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
502.0	100.0	121.1	At2g15340	816025	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBFOPA	O.I.	C.G.	H.G.
472.4	100.0	216.1	At4g25010	828604	nodulin MtN3 family protein	F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMO	O.I.	C.G.	H.G.
440.9	100.0	125.1	At3g60780	825249	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
371.8	100.0	155.7	At4g13790	827013	auxin-responsive protein, putative	F:molecular_function unknown;P:response to auxin stimulus, response to red light, response to far red light;C:unknown;PO	O.I.	C.G.	H.G.
366.1	100.0	170.9	At5g24655	832537	LSU4 (RESPONSE TO LOW SULFUR 4)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
361.8	100.0	380.8	At1g77590	844094	LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9)	Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.	O.I.	C.G.	H.G.
352.1	100.0	204.7	At3g11430	820316	GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5)	Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.	O.I.	C.G.	H.G.
326.2	100.0	75.4	At4g39130	830068	dehydrin family protein	F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
308.7	100.0	253.9	At5g46940	834740	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
302.6	100.0	290.6	At3g22910	821863	calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)	F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV	O.I.	C.G.	H.G.
281.9	100.0	99.0	At3g57510	824918	ADPG1	Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.	O.I.	C.G.	H.G.
260.4	100.0	111.7	At3g06490	819827	MYB108 (myb domain protein 108)	putative transcription factor MYB108 (MYB108) mRNA,	O.I.	C.G.	H.G.
257.1	100.0	77.3	At3g07840	819975	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
234.2	100.0	155.6	At3g53510	824519	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
233.1	100.0	55.8	At1g13130	837870	glycosyl hydrolase family 5 protein / cellulase family protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BPFO	O.I.	C.G.	H.G.
221.8	100.0	274.9	At5g65870	836716	ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)	Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor.	O.I.	C.G.	H.G.
192.5	100.0	79.6	At5g40350	834033	MYB24 (myb domain protein 24)	Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.	O.I.	C.G.	H.G.
191.3	100.0	76.8	At4g17690	827489	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
164.5	100.0	50.8	At3g28770	822509	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOBFPVA	O.I.	C.G.	H.G.
157.6	99.9	121.0	At1g59640	842254	ZCW32	A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.	O.I.	C.G.	H.G.
148.8	99.9	318.6	At1g73220	843656	AtOCT1 (Arabidopsis thaliana ORGANIC CATION/CARNITINE TRANSPORTER1)	F:carnitine transporter activity, transporter activity, carbohydrate transmembrane transporter activity;P:unknown;C:plasma membrane, membrane;BMFPOA	O.I.	C.G.	H.G.
147.3	99.9	124.2	At1g09380	837460	integral membrane family protein / nodulin MtN21-related	F:unknown;P:unknown;C:endomembrane system, membrane;BOPAMF	O.I.	C.G.	H.G.
146.6	99.9	257.5	At4g01470	828051	TIP1	Encodes AtTIP1;3, functions as water and urea channels in pollen.	O.I.	C.G.	H.G.
144.4	99.9	58.3	At1g75300	843867	isoflavone reductase, putative	encodes a protein whose sequence is similar to an isoflavone reductase	O.I.	C.G.	H.G.
141.2	99.9	121.0	At3g10460	820210	self-incompatibility protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
137.5	99.9	97.2	At3g07830	819974	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMA	O.I.	C.G.	H.G.
135.2	99.9	125.4	At3g27810	822401	ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)	Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.	O.I.	C.G.	H.G.
133.3	99.9	136.7	At5g50800	835152	nodulin MtN3 family protein	F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMO	O.I.	C.G.	H.G.
131.3	99.9	169.8	At2g45580	819166	CYP76C3	member of CYP76C	O.I.	C.G.	H.G.
130.1	99.9	122.5	At1g61110	842404	anac025 (Arabidopsis NAC domain containing protein 25)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
128.5	99.9	46.9	At2g19010	816418	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
124.7	99.9	277.8	At1g52680	841700	late embryogenesis abundant protein-related / LEA protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
120.8	99.9	253.6	At5g59120	836030	ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13)	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
119.1	99.9	450.6	At4g24380	828540	unknown protein	F:unknown;P:10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process;C:unknown;FMPOB	O.I.	C.G.	H.G.
118.8	99.9	146.8	At5g13580	831202	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
118.0	99.9	259.1	At4g25040	828607	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
115.9	99.9	75.8	At4g10850	826682	nodulin MtN3 family protein	F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOB	O.I.	C.G.	H.G.
113.9	99.9	230.7	At4g13230	826939	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PMBOF	O.I.	C.G.	H.G.
113.7	99.9	76.3	At3g51070	824271	dehydration-responsive protein-related	F:unknown;P:biological_process unknown;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
112.8	99.9	110.7	At1g21140	838710	nodulin, putative	F:unknown;P:biological_process unknown;C:unknown;BOPFA	O.I.	C.G.	H.G.
111.7	99.9	56.4	At3g46750	823828	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
111.0	99.9	167.9	At3g14560	820682	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
110.2	99.9	47.5	At1g29230	839797	CIPK18 (CBL-INTERACTING PROTEIN KINASE 18)	Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.20), which has also been reported as a member of the CBL-interacting protein kinases (CIPK18).	O.I.	C.G.	H.G.
110.1	99.9	23.2	At1g42560	840861	MLO9 (MILDEW RESISTANCE LOCUS O 9)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO9 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO10. The gene is expressed during early seedling growth, in cotyledon vascular system, in flowers (with strong expression in anthers) in siliques and fruit abscission zone; not expressed in roots, or in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).	O.I.	C.G.	H.G.
109.0	99.9	117.9	At5g62750	836396	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA	O.I.	C.G.	H.G.
102.7	99.9	368.8	At3g28840	822516	unknown protein	F:unknown;P:unknown;C:endomembrane system;BOMPFVA	O.I.	C.G.	H.G.
101.9	99.9	115.8	At3g52620	824428	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
101.6	99.9	21.4	At1g68090	843137	ANN5	Encodes a calcium-binding protein annexin (AnnAt5).	O.I.	C.G.	H.G.
99.8	99.9	33.5	At5g61700	836292	ATATH16	member of ATH subfamily	O.I.	C.G.	H.G.
98.1	99.9	250.8	At2g19000	816417	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM	O.I.	C.G.	H.G.
97.9	99.9	36.2	At5g08250	830721	cytochrome P450 family protein	F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:cellular_component unknown;MPFBOAV	O.I.	C.G.	H.G.
96.9	99.9	138.0	At1g73630	843697	calcium-binding protein, putative	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	H.G.
96.3	99.9	49.5	At2g15535	816046	LCR10 (Low-molecular-weight cysteine-rich 10)	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
95.6	99.9	127.7	At4g08290	826383	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;BPOAMF	O.I.	C.G.	H.G.
95.5	99.9	102.8	At1g54570	841899	esterase/lipase/thioesterase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:unknown;C:chloroplast, plastoglobule;BMPOF	O.I.	C.G.	H.G.
95.1	99.9	83.7	At4g15980	827282	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:apoplast, plant-type cell wall;BMOPFAV	O.I.	C.G.	H.G.
94.7	99.9	101.2	At1g26480	839189	GRF12 (GENERAL REGULATORY FACTOR 12)	14-3-3 protein GF14iota (grf12)	O.I.	C.G.	H.G.
94.6	99.9	139.2	At3g01250	821184	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOP	O.I.	C.G.	H.G.
94.4	99.9	283.2	At4g11760	826782	LCR17 (Low-molecular-weight cysteine-rich 17)	Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.	O.I.	C.G.	H.G.
91.7	99.9	108.8	At3g22740	821845	HMT3	homocysteine S-methyltransferase (HMT3)	O.I.	C.G.	H.G.
89.5	99.9	72.5	At5g36260	833623	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFO	O.I.	C.G.	H.G.
89.4	99.9	101.9	At1g04670	839451	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PAF	O.I.	C.G.	H.G.
88.9	99.9	98.0	At5g17480	831614	APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)	F:calcium ion binding;P:biological_process unknown;C:cytoplasm;MPFOB	O.I.	C.G.	H.G.
88.5	99.9	35.5	At3g03080	821128	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOFMPA	O.I.	C.G.	H.G.
88.3	99.9	348.7	At5g53820	835463	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
86.5	99.9	145.0	At3g23410	821922	alcohol oxidase-related	Encodes a fatty alcohol oxidase.	O.I.	C.G.	H.G.
86.4	99.9	122.7	At3g60570	825228	ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5)	member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
86.3	99.9	22.8	At3g55190	824685	esterase/lipase/thioesterase family protein	F:catalytic activity;P:glycerol biosynthetic process;C:cellular_component unknown;BOPMFVA	O.I.	C.G.	H.G.
85.6	99.9	179.0	At3g43960	823513	cysteine proteinase, putative	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:anchored to membrane;MOPVBAF	O.I.	C.G.	H.G.
85.5	99.9	235.1	At2g19770	816496	PRF5 (PROFILIN5)	Encodes profilin 5, originally named profilin 4 (PRO4/PFN4). Low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Pollen-specific plant profilin present predominantly in mature pollen and growing pollen tubes.	O.I.	C.G.	H.G.
84.5	99.9	98.3	At1g74000	843738	SS3 (STRICTOSIDINE SYNTHASE 3)	encodes a protein similar to strictosidine synthase, which is involved in the production of monoterpene indole alkaloids. This gene belongs to a family of 13 members in Arabidopsis.	O.I.	C.G.	H.G.
84.0	99.9	220.7	At2g46860	819299	AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3)	Encodes a protein that might have inorganic pyrophosphatase activity.	O.I.	C.G.	H.G.
83.4	99.9	227.4	At4g29340	829055	PRF4 (PROFILIN 4)	Profilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining.	O.I.	C.G.	H.G.
82.7	99.9	62.3	At1g57550	842130	hydrophobic protein, putative / low temperature and salt responsive protein, putative	F:unknown;P:hyperosmotic salinity response, response to cold;C:endomembrane system, integral to membrane;BPFMO	O.I.	C.G.	H.G.
82.5	99.9	26.8	At1g79250	844265	AGC1.7 (AGC KINASE 1.7)	F:kinase activity;P:pollen tube growth, unidimensional cell growth;C:unknown;MOPFBVA	O.I.	C.G.	H.G.
79.4	99.9	55.3	At5g46200	834662	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PF	O.I.	C.G.	H.G.
79.3	99.9	262.3	At3g28810	822513	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMBFPVA	O.I.	C.G.	H.G.
79.3	99.9	66.9	At5g25880	832657	ATNADP-ME3 (NADP-malic enzyme 3)	The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.	O.I.	C.G.	H.G.
78.9	99.9	14.9	At2g30240	817574	ATCHX13	Encodes a plasma membrane localized potassium transporter.	O.I.	C.G.	H.G.
78.5	99.9	71.6	At4g25950	828701	VATG3 (vacuolar ATP synthase G3)	V-ATPase G-subunit like protein	O.I.	C.G.	H.G.
78.0	99.9	194.4	At5g09550	830814	RAB GDP-dissociation inhibitor	F:RAB GDP-dissociation inhibitor activity;P:regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPB	O.I.	C.G.	H.G.
78.0	99.9	50.8	At2g10970	815562	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
76.7	99.9	264.7	At5g07420	830633	pectinesterase family protein	F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
76.4	99.9	18.3	At5g37060	833677	ATCHX24	member of Putative Na+/H+ antiporter family	O.I.	C.G.	H.G.
75.6	99.9	83.8	At4g31330	829260	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO	O.I.	C.G.	H.G.
75.0	99.9	121.4	At1g22640	838870	MYB3 (MYB DOMAIN PROTEIN 3)	MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression	O.I.	C.G.	H.G.
73.9	99.9	43.9	At2g04675	815010	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
73.9	99.9	22.2	At2g45610	819169	hydrolase	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BPOFMAV	O.I.	C.G.	H.G.
73.8	99.9	51.4	At4g10440	826636	dehydration-responsive family protein	F:unknown;P:unknown;C:unknown;PBOA	O.I.	C.G.	H.G.
73.4	99.9	37.2	At2g13620	815847	ATCHX15	member of Putative Na+/H+ antiporter family	O.I.	C.G.	H.G.
72.6	99.9	28.0	At4g36770	829830	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
72.4	99.9	188.2	At3g10340	820196	PAL4 (Phenylalanine ammonia-lyase 4)	F:ammonia-lyase activity, ammonia ligase activity, catalytic activity;P:L-phenylalanine catabolic process, biosynthetic process;C:cytoplasm;BPOFMA	O.I.	C.G.	H.G.
70.9	99.9	24.2	At5g19610	832081	sec7 domain-containing protein	F:ARF guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPB	O.I.	C.G.	H.G.
70.8	99.9	48.7	At4g12410	826850	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
69.8	99.9	20.2	At5g64690	836590	neurofilament triplet H protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
68.6	99.9	122.6	At2g29790	817529	-	Encodes a Maternally expressed gene (MEG) family protein [pseudogene]	O.I.	C.G.	H.G.
68.1	99.9	514.4	At3g28830	822515	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;MOBFPVA	O.I.	C.G.	H.G.
67.9	99.9	391.8	At3g28980	822538	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPVA	O.I.	C.G.	H.G.

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GSM ID	GSM106917
Assay name	opr3_JA_22 hrs_Rep3
GSE experiment	GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling

Microarray experiments to specifically-expressed genes

GSM ID GSM106917 Assay name opr3_JA_22 hrs_Rep3 GSE experiment GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling

GSM ID GSM106917

Assay name opr3_JA_22 hrs_Rep3

GSE experiment GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling