CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM106913

Assay name opr3_JA_8 hrs_Rep2

GSE experiment GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
546.3 100.0 85.5 At1g13130 837870 glycosyl hydrolase family 5 protein / cellulase family protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BPFO O.I. C.G. H.G.
522.2 100.0 132.3 At4g12410 826850 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
373.2 100.0 460.8 At4g25040 828607 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
372.9 100.0 121.2 At1g15460 838116 BOR4 (REQUIRES HIGH BORON 4) Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions. O.I. C.G. H.G.
360.5 100.0 95.9 At2g15535 816046 LCR10 (Low-molecular-weight cysteine-rich 10) F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
359.7 100.0 100.8 At3g17220 820981 PMEI2 Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates. O.I. C.G. H.G.
353.6 100.0 151.9 At4g13790 827013 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus, response to red light, response to far red light;C:unknown;PO O.I. C.G. H.G.
352.7 100.0 31.3 At3g23350 821916 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
334.8 100.0 143.7 At3g12660 820446 FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR) fasciclin-like arabinogalactan-protein, family (FLA14) O.I. C.G. H.G.
317.5 100.0 91.0 At2g04675 815010 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
316.7 100.0 410.6 At5g59120 836030 ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13) F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
315.3 100.0 171.2 At1g59640 842254 ZCW32 A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS. O.I. C.G. H.G.
305.9 100.0 258.8 At2g29790 817529 - Encodes a Maternally expressed gene (MEG) family protein [pseudogene] O.I. C.G. H.G.
288.1 100.0 201.7 At5g42170 834222 carboxylesterase/ hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:unknown;PBOFVM O.I. C.G. H.G.
284.8 100.0 243.9 At5g46940 834740 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
284.5 100.0 99.5 At3g57510 824918 ADPG1 Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding. O.I. C.G. H.G.
280.6 100.0 119.8 At3g51070 824271 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:unknown;MOBFPVA O.I. C.G. H.G.
255.7 100.0 142.8 At5g24655 832537 LSU4 (RESPONSE TO LOW SULFUR 4) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
235.0 100.0 223.3 At5g62850 836406 AtVEX1 (VEGETATIVE CELL EXPRESSED1) Encodes a protein that is expressed in vegetative cells of pollen. O.I. C.G. H.G.
231.0 100.0 322.8 At2g28355 817383 LCR5 (Low-molecular-weight cysteine-rich 5) F:molecular_function unknown;P:defense response;C:endomembrane system;P O.I. C.G. H.G.
228.6 100.0 162.3 At1g61110 842404 anac025 (Arabidopsis NAC domain containing protein 25) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
225.3 100.0 161.8 At1g04670 839451 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PAF O.I. C.G. H.G.
216.4 100.0 239.6 At3g04620 819620 nucleic acid binding F:nucleic acid binding;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
212.2 100.0 314.8 At4g13230 826939 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PMBOF O.I. C.G. H.G.
211.0 100.0 191.9 At2g16750 816176 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
209.6 100.0 44.6 At3g53080 824474 galactose-binding lectin family protein F:sugar binding, beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;POMB O.I. C.G. H.G.
205.7 100.0 118.9 At3g07830 819974 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMA O.I. C.G. H.G.
201.6 100.0 84.9 At4g10440 826636 dehydration-responsive family protein F:unknown;P:unknown;C:unknown;PBOA O.I. C.G. H.G.
201.3 100.0 169.2 At2g17730 816282 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
198.1 100.0 410.3 At4g11760 826782 LCR17 (Low-molecular-weight cysteine-rich 17) Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. O.I. C.G. H.G.
194.9 100.0 132.1 At3g19090 821444 RNA-binding protein, putative F:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:ribonucleoprotein complex, nucleus;MPOFB O.I. C.G. H.G.
193.0 100.0 149.8 At3g27810 822401 ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I. C.G. H.G.
192.3 100.0 504.8 At3g28840 822516 unknown protein F:unknown;P:unknown;C:endomembrane system;BOMPFVA O.I. C.G. H.G.
190.3 100.0 85.6 At5g46200 834662 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PF O.I. C.G. H.G.
189.7 100.0 371.7 At1g80660 844405 AHA9 F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:proton transport;C:plasma membrane;BMOFPAV O.I. C.G. H.G.
183.9 100.0 141.0 At1g26480 839189 GRF12 (GENERAL REGULATORY FACTOR 12) 14-3-3 protein GF14iota (grf12) O.I. C.G. H.G.
180.3 100.0 133.6 At2g32890 817850 RALFL17 (RALF-LIKE 17) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. This gene is contained within a highly AT-rich repetitive sequence region. O.I. C.G. H.G.
179.0 100.0 62.6 At3g01350 819616 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOF O.I. C.G. H.G.
178.7 100.0 88.6 At2g33690 817934 late embryogenesis abundant protein, putative / LEA protein, putative F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
178.0 100.0 37.5 At4g35670 829719 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMVA O.I. C.G. H.G.
171.4 100.0 280.5 At5g44300 834453 dormancy/auxin associated family protein F:molecular_function unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
169.9 100.0 62.8 At3g07840 819975 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
169.8 100.0 70.4 At2g15340 816025 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBFOPA O.I. C.G. H.G.
169.5 100.0 41.2 At1g72960 843627 root hair defective 3 GTP-binding (RHD3) family protein F:nucleotide binding;P:unknown;C:cellular_component unknown;OFPMB O.I. C.G. H.G.
164.6 100.0 150.3 At4g02140 827460 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
164.5 100.0 476.0 At5g53820 835463 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
163.4 99.9 145.3 At3g22740 821845 HMT3 homocysteine S-methyltransferase (HMT3) O.I. C.G. H.G.
163.1 99.9 436.2 At2g07560 815329 AHA6 (Arabidopsis H(+)-ATPase 6) F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAV O.I. C.G. H.G.
161.7 99.9 53.7 At1g68750 843206 ATPPC4 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins. O.I. C.G. H.G.
159.9 99.9 268.9 At4g01470 828051 TIP1 Encodes AtTIP1;3, functions as water and urea channels in pollen. O.I. C.G. H.G.
159.7 99.9 158.5 At1g71680 843494 amino acid transmembrane transporter F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBV O.I. C.G. H.G.
159.1 99.9 313.7 At1g52680 841700 late embryogenesis abundant protein-related / LEA protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
158.4 99.9 52.5 At4g39130 830068 dehydrin family protein F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMO O.I. C.G. H.G.
152.2 99.9 99.7 At4g25950 828701 VATG3 (vacuolar ATP synthase G3) V-ATPase G-subunit like protein O.I. C.G. H.G.
150.5 99.9 41.2 At5g61700 836292 ATATH16 member of ATH subfamily O.I. C.G. H.G.
149.9 99.9 89.1 At2g22950 816826 calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV O.I. C.G. H.G.
146.9 99.9 35.3 At5g08480 830747 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
146.8 99.9 106.3 At3g21970 821756 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
144.8 99.9 75.1 At1g26320 839174 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOMFPA O.I. C.G. H.G.
137.3 99.9 88.1 At5g25880 832657 ATNADP-ME3 (NADP-malic enzyme 3) The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals. O.I. C.G. H.G.
134.4 99.9 341.4 At3g28810 822513 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMBFPVA O.I. C.G. H.G.
131.9 99.9 52.4 At4g11030 826704 long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative F:catalytic activity;P:fatty acid biosynthetic process;C:unknown;BOMFPAV O.I. C.G. H.G.
130.4 99.9 712.0 At3g28830 822515 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;MOBFPVA O.I. C.G. H.G.
129.4 99.9 114.4 At1g52570 841689 PLDALPHA2 (phosphlipase d alpha 2) member of C2-PLD subfamily O.I. C.G. H.G.
129.2 99.9 93.7 At3g08560 820003 VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2) F:hydrogen-exporting ATPase activity, phosphorylative mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:vacuole, mitochondrial proton-transporting ATP synthase complex;MOFPAB O.I. C.G. H.G.
127.6 99.9 268.5 At2g47600 819373 ATMHX (ARABIDOPSIS THALIANA MAGNESIUM/PROTON EXCHANGER) Encodes a magnesium/proton exchanger, member of putative Na+/Ca2+ antiporter gene family O.I. C.G. H.G.
126.3 99.9 51.1 At1g64800 842788 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, glutamate catabolic process to succinate;C:cellular_component unknown O.I. C.G. H.G.
125.6 99.9 200.1 At1g42470 840851 patched family protein F:hedgehog receptor activity;P:unknown;C:plasma membrane, membrane;MOBFPA O.I. C.G. H.G.
123.2 99.9 527.9 At3g28980 822538 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPVA O.I. C.G. H.G.
122.7 99.9 36.1 At2g30290 817579 vacuolar sorting receptor, putative F:calcium ion binding;P:protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex;MOPBA O.I. C.G. H.G.
121.2 99.9 51.9 At5g66020 836732 ATSAC1B (SUPPRESSOR OF ACTIN 1B) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13. O.I. C.G. H.G.
120.8 99.9 671.8 At3g28790 822511 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOFBPVA O.I. C.G. H.G.
118.6 99.9 111.0 At5g08750 830776 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO O.I. C.G. H.G.
117.6 99.9 57.8 At3g46750 823828 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
116.4 99.9 35.8 At4g26830 828790 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO O.I. C.G. H.G.
115.0 99.9 55.5 At2g19330 816450 leucine-rich repeat family protein F:protein binding;P:biological_process unknown;C:chloroplast;MPBOFAV O.I. C.G. H.G.
111.7 99.9 72.4 At1g57550 842130 hydrophobic protein, putative / low temperature and salt responsive protein, putative F:unknown;P:hyperosmotic salinity response, response to cold;C:endomembrane system, integral to membrane;BPFMO O.I. C.G. H.G.
110.1 99.9 193.6 At5g65870 836716 ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR) Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor. O.I. C.G. H.G.
105.4 99.9 269.2 At3g28780 822510 unknown protein F:molecular_function unknown;P:pollen exine formation;C:endomembrane system;BOMPFVA O.I. C.G. H.G.
102.2 99.9 23.4 At1g22150 838820 SULTR1 sulfate transporter Sultr1;3 O.I. C.G. H.G.
101.9 99.9 63.5 At1g62450 842543 Rho GDP-dissociation inhibitor family protein F:Rho GDP-dissociation inhibitor activity;P:biological_process unknown;C:cytoplasm;MFPO O.I. C.G. H.G.
101.6 99.9 55.7 At1g66360 842954 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
100.8 99.9 36.5 At5g02720 831821 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
100.0 99.9 103.9 At5g17480 831614 APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1) F:calcium ion binding;P:biological_process unknown;C:cytoplasm;MPFOB O.I. C.G. H.G.
98.5 99.9 247.1 At4g29340 829055 PRF4 (PROFILIN 4) Profilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining. O.I. C.G. H.G.
97.5 99.9 237.8 At2g46860 819299 AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3) Encodes a protein that might have inorganic pyrophosphatase activity. O.I. C.G. H.G.
97.1 99.9 32.6 At3g09930 820154 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
96.7 99.9 540.0 At4g13560 826989 UNE15 (unfertilized embryo sac 15) F:molecular_function unknown;P:embryonic development ending in seed dormancy, double fertilization forming a zygote and endosperm;C:cellular_component unknown;PMBFO O.I. C.G. H.G.
96.6 99.9 65.9 At1g12070 837759 Rho GDP-dissociation inhibitor family protein F:Rho GDP-dissociation inhibitor activity;P:biological_process unknown;C:cytoplasm;MFPO O.I. C.G. H.G.
95.0 99.9 23.9 At3g55190 824685 esterase/lipase/thioesterase family protein F:catalytic activity;P:glycerol biosynthetic process;C:cellular_component unknown;BOPMFVA O.I. C.G. H.G.
94.8 99.9 537.6 At5g38760 833867 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PF O.I. C.G. H.G.
94.5 99.9 47.4 At2g20430 816562 RIC6 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 6) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC7 and RIC8 (subfamily group II). Gene is expressed predominantly in inflorescence and flower tissue. O.I. C.G. H.G.
93.9 99.9 146.3 At1g22760 838882 PAB3 (POLY(A) BINDING PROTEIN 3) Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs. O.I. C.G. H.G.
93.1 99.9 46.2 At5g25550 832630 leucine-rich repeat family protein / extensin family protein F:structural constituent of cell wall, protein binding;P:biological_process unknown;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
92.6 99.9 95.8 At4g20460 827794 NAD-dependent epimerase/dehydratase family protein F:coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity;P:galactose metabolic process, cellular metabolic process, nucleotide-sugar metabolic process, metabolic process;C:endomembrane system;BOPMAFV O.I. C.G. H.G.
92.4 99.9 23.9 At3g02440 821154 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOFB O.I. C.G. H.G.
91.3 99.9 136.8 At3g01250 821184 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOP O.I. C.G. H.G.
91.2 99.9 133.8 At1g73630 843697 calcium-binding protein, putative F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOB O.I. C.G. H.G.
90.7 99.9 45.6 At1g22130 838818 AGL104 (AGAMOUS-LIKE 104) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth. O.I. C.G. H.G.
90.4 99.9 15.9 At2g30240 817574 ATCHX13 Encodes a plasma membrane localized potassium transporter. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
546.3	100.0	85.5	At1g13130	837870	glycosyl hydrolase family 5 protein / cellulase family protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BPFO	O.I.	C.G.	H.G.
522.2	100.0	132.3	At4g12410	826850	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
373.2	100.0	460.8	At4g25040	828607	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
372.9	100.0	121.2	At1g15460	838116	BOR4 (REQUIRES HIGH BORON 4)	Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions.	O.I.	C.G.	H.G.
360.5	100.0	95.9	At2g15535	816046	LCR10 (Low-molecular-weight cysteine-rich 10)	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
359.7	100.0	100.8	At3g17220	820981	PMEI2	Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates.	O.I.	C.G.	H.G.
353.6	100.0	151.9	At4g13790	827013	auxin-responsive protein, putative	F:molecular_function unknown;P:response to auxin stimulus, response to red light, response to far red light;C:unknown;PO	O.I.	C.G.	H.G.
352.7	100.0	31.3	At3g23350	821916	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
334.8	100.0	143.7	At3g12660	820446	FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)	fasciclin-like arabinogalactan-protein, family (FLA14)	O.I.	C.G.	H.G.
317.5	100.0	91.0	At2g04675	815010	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
316.7	100.0	410.6	At5g59120	836030	ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13)	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
315.3	100.0	171.2	At1g59640	842254	ZCW32	A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.	O.I.	C.G.	H.G.
305.9	100.0	258.8	At2g29790	817529	-	Encodes a Maternally expressed gene (MEG) family protein [pseudogene]	O.I.	C.G.	H.G.
288.1	100.0	201.7	At5g42170	834222	carboxylesterase/ hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:unknown;PBOFVM	O.I.	C.G.	H.G.
284.8	100.0	243.9	At5g46940	834740	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
284.5	100.0	99.5	At3g57510	824918	ADPG1	Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.	O.I.	C.G.	H.G.
280.6	100.0	119.8	At3g51070	824271	dehydration-responsive protein-related	F:unknown;P:biological_process unknown;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
255.7	100.0	142.8	At5g24655	832537	LSU4 (RESPONSE TO LOW SULFUR 4)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
235.0	100.0	223.3	At5g62850	836406	AtVEX1 (VEGETATIVE CELL EXPRESSED1)	Encodes a protein that is expressed in vegetative cells of pollen.	O.I.	C.G.	H.G.
231.0	100.0	322.8	At2g28355	817383	LCR5 (Low-molecular-weight cysteine-rich 5)	F:molecular_function unknown;P:defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
228.6	100.0	162.3	At1g61110	842404	anac025 (Arabidopsis NAC domain containing protein 25)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
225.3	100.0	161.8	At1g04670	839451	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PAF	O.I.	C.G.	H.G.
216.4	100.0	239.6	At3g04620	819620	nucleic acid binding	F:nucleic acid binding;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
212.2	100.0	314.8	At4g13230	826939	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PMBOF	O.I.	C.G.	H.G.
211.0	100.0	191.9	At2g16750	816176	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
209.6	100.0	44.6	At3g53080	824474	galactose-binding lectin family protein	F:sugar binding, beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;POMB	O.I.	C.G.	H.G.
205.7	100.0	118.9	At3g07830	819974	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMA	O.I.	C.G.	H.G.
201.6	100.0	84.9	At4g10440	826636	dehydration-responsive family protein	F:unknown;P:unknown;C:unknown;PBOA	O.I.	C.G.	H.G.
201.3	100.0	169.2	At2g17730	816282	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
198.1	100.0	410.3	At4g11760	826782	LCR17 (Low-molecular-weight cysteine-rich 17)	Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.	O.I.	C.G.	H.G.
194.9	100.0	132.1	At3g19090	821444	RNA-binding protein, putative	F:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:ribonucleoprotein complex, nucleus;MPOFB	O.I.	C.G.	H.G.
193.0	100.0	149.8	At3g27810	822401	ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)	Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.	O.I.	C.G.	H.G.
192.3	100.0	504.8	At3g28840	822516	unknown protein	F:unknown;P:unknown;C:endomembrane system;BOMPFVA	O.I.	C.G.	H.G.
190.3	100.0	85.6	At5g46200	834662	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PF	O.I.	C.G.	H.G.
189.7	100.0	371.7	At1g80660	844405	AHA9	F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:proton transport;C:plasma membrane;BMOFPAV	O.I.	C.G.	H.G.
183.9	100.0	141.0	At1g26480	839189	GRF12 (GENERAL REGULATORY FACTOR 12)	14-3-3 protein GF14iota (grf12)	O.I.	C.G.	H.G.
180.3	100.0	133.6	At2g32890	817850	RALFL17 (RALF-LIKE 17)	Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. This gene is contained within a highly AT-rich repetitive sequence region.	O.I.	C.G.	H.G.
179.0	100.0	62.6	At3g01350	819616	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PBMOF	O.I.	C.G.	H.G.
178.7	100.0	88.6	At2g33690	817934	late embryogenesis abundant protein, putative / LEA protein, putative	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
178.0	100.0	37.5	At4g35670	829719	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMVA	O.I.	C.G.	H.G.
171.4	100.0	280.5	At5g44300	834453	dormancy/auxin associated family protein	F:molecular_function unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
169.9	100.0	62.8	At3g07840	819975	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
169.8	100.0	70.4	At2g15340	816025	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBFOPA	O.I.	C.G.	H.G.
169.5	100.0	41.2	At1g72960	843627	root hair defective 3 GTP-binding (RHD3) family protein	F:nucleotide binding;P:unknown;C:cellular_component unknown;OFPMB	O.I.	C.G.	H.G.
164.6	100.0	150.3	At4g02140	827460	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
164.5	100.0	476.0	At5g53820	835463	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
163.4	99.9	145.3	At3g22740	821845	HMT3	homocysteine S-methyltransferase (HMT3)	O.I.	C.G.	H.G.
163.1	99.9	436.2	At2g07560	815329	AHA6 (Arabidopsis H(+)-ATPase 6)	F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAV	O.I.	C.G.	H.G.
161.7	99.9	53.7	At1g68750	843206	ATPPC4	Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.	O.I.	C.G.	H.G.
159.9	99.9	268.9	At4g01470	828051	TIP1	Encodes AtTIP1;3, functions as water and urea channels in pollen.	O.I.	C.G.	H.G.
159.7	99.9	158.5	At1g71680	843494	amino acid transmembrane transporter	F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBV	O.I.	C.G.	H.G.
159.1	99.9	313.7	At1g52680	841700	late embryogenesis abundant protein-related / LEA protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
158.4	99.9	52.5	At4g39130	830068	dehydrin family protein	F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
152.2	99.9	99.7	At4g25950	828701	VATG3 (vacuolar ATP synthase G3)	V-ATPase G-subunit like protein	O.I.	C.G.	H.G.
150.5	99.9	41.2	At5g61700	836292	ATATH16	member of ATH subfamily	O.I.	C.G.	H.G.
149.9	99.9	89.1	At2g22950	816826	calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7)	F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV	O.I.	C.G.	H.G.
146.9	99.9	35.3	At5g08480	830747	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
146.8	99.9	106.3	At3g21970	821756	receptor-like protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
144.8	99.9	75.1	At1g26320	839174	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOMFPA	O.I.	C.G.	H.G.
137.3	99.9	88.1	At5g25880	832657	ATNADP-ME3 (NADP-malic enzyme 3)	The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.	O.I.	C.G.	H.G.
134.4	99.9	341.4	At3g28810	822513	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMBFPVA	O.I.	C.G.	H.G.
131.9	99.9	52.4	At4g11030	826704	long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative	F:catalytic activity;P:fatty acid biosynthetic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
130.4	99.9	712.0	At3g28830	822515	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;MOBFPVA	O.I.	C.G.	H.G.
129.4	99.9	114.4	At1g52570	841689	PLDALPHA2 (phosphlipase d alpha 2)	member of C2-PLD subfamily	O.I.	C.G.	H.G.
129.2	99.9	93.7	At3g08560	820003	VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2)	F:hydrogen-exporting ATPase activity, phosphorylative mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:vacuole, mitochondrial proton-transporting ATP synthase complex;MOFPAB	O.I.	C.G.	H.G.
127.6	99.9	268.5	At2g47600	819373	ATMHX (ARABIDOPSIS THALIANA MAGNESIUM/PROTON EXCHANGER)	Encodes a magnesium/proton exchanger, member of putative Na+/Ca2+ antiporter gene family	O.I.	C.G.	H.G.
126.3	99.9	51.1	At1g64800	842788	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, glutamate catabolic process to succinate;C:cellular_component unknown	O.I.	C.G.	H.G.
125.6	99.9	200.1	At1g42470	840851	patched family protein	F:hedgehog receptor activity;P:unknown;C:plasma membrane, membrane;MOBFPA	O.I.	C.G.	H.G.
123.2	99.9	527.9	At3g28980	822538	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPVA	O.I.	C.G.	H.G.
122.7	99.9	36.1	At2g30290	817579	vacuolar sorting receptor, putative	F:calcium ion binding;P:protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex;MOPBA	O.I.	C.G.	H.G.
121.2	99.9	51.9	At5g66020	836732	ATSAC1B (SUPPRESSOR OF ACTIN 1B)	Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.	O.I.	C.G.	H.G.
120.8	99.9	671.8	At3g28790	822511	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOFBPVA	O.I.	C.G.	H.G.
118.6	99.9	111.0	At5g08750	830776	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
117.6	99.9	57.8	At3g46750	823828	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
116.4	99.9	35.8	At4g26830	828790	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO	O.I.	C.G.	H.G.
115.0	99.9	55.5	At2g19330	816450	leucine-rich repeat family protein	F:protein binding;P:biological_process unknown;C:chloroplast;MPBOFAV	O.I.	C.G.	H.G.
111.7	99.9	72.4	At1g57550	842130	hydrophobic protein, putative / low temperature and salt responsive protein, putative	F:unknown;P:hyperosmotic salinity response, response to cold;C:endomembrane system, integral to membrane;BPFMO	O.I.	C.G.	H.G.
110.1	99.9	193.6	At5g65870	836716	ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)	Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor.	O.I.	C.G.	H.G.
105.4	99.9	269.2	At3g28780	822510	unknown protein	F:molecular_function unknown;P:pollen exine formation;C:endomembrane system;BOMPFVA	O.I.	C.G.	H.G.
102.2	99.9	23.4	At1g22150	838820	SULTR1	sulfate transporter Sultr1;3	O.I.	C.G.	H.G.
101.9	99.9	63.5	At1g62450	842543	Rho GDP-dissociation inhibitor family protein	F:Rho GDP-dissociation inhibitor activity;P:biological_process unknown;C:cytoplasm;MFPO	O.I.	C.G.	H.G.
101.6	99.9	55.7	At1g66360	842954	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
100.8	99.9	36.5	At5g02720	831821	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
100.0	99.9	103.9	At5g17480	831614	APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)	F:calcium ion binding;P:biological_process unknown;C:cytoplasm;MPFOB	O.I.	C.G.	H.G.
98.5	99.9	247.1	At4g29340	829055	PRF4 (PROFILIN 4)	Profilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining.	O.I.	C.G.	H.G.
97.5	99.9	237.8	At2g46860	819299	AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3)	Encodes a protein that might have inorganic pyrophosphatase activity.	O.I.	C.G.	H.G.
97.1	99.9	32.6	At3g09930	820154	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
96.7	99.9	540.0	At4g13560	826989	UNE15 (unfertilized embryo sac 15)	F:molecular_function unknown;P:embryonic development ending in seed dormancy, double fertilization forming a zygote and endosperm;C:cellular_component unknown;PMBFO	O.I.	C.G.	H.G.
96.6	99.9	65.9	At1g12070	837759	Rho GDP-dissociation inhibitor family protein	F:Rho GDP-dissociation inhibitor activity;P:biological_process unknown;C:cytoplasm;MFPO	O.I.	C.G.	H.G.
95.0	99.9	23.9	At3g55190	824685	esterase/lipase/thioesterase family protein	F:catalytic activity;P:glycerol biosynthetic process;C:cellular_component unknown;BOPMFVA	O.I.	C.G.	H.G.
94.8	99.9	537.6	At5g38760	833867	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PF	O.I.	C.G.	H.G.
94.5	99.9	47.4	At2g20430	816562	RIC6 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 6)	encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC7 and RIC8 (subfamily group II). Gene is expressed predominantly in inflorescence and flower tissue.	O.I.	C.G.	H.G.
93.9	99.9	146.3	At1g22760	838882	PAB3 (POLY(A) BINDING PROTEIN 3)	Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.	O.I.	C.G.	H.G.
93.1	99.9	46.2	At5g25550	832630	leucine-rich repeat family protein / extensin family protein	F:structural constituent of cell wall, protein binding;P:biological_process unknown;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
92.6	99.9	95.8	At4g20460	827794	NAD-dependent epimerase/dehydratase family protein	F:coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity;P:galactose metabolic process, cellular metabolic process, nucleotide-sugar metabolic process, metabolic process;C:endomembrane system;BOPMAFV	O.I.	C.G.	H.G.
92.4	99.9	23.9	At3g02440	821154	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOFB	O.I.	C.G.	H.G.
91.3	99.9	136.8	At3g01250	821184	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOP	O.I.	C.G.	H.G.
91.2	99.9	133.8	At1g73630	843697	calcium-binding protein, putative	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	H.G.
90.7	99.9	45.6	At1g22130	838818	AGL104 (AGAMOUS-LIKE 104)	Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.	O.I.	C.G.	H.G.
90.4	99.9	15.9	At2g30240	817574	ATCHX13	Encodes a plasma membrane localized potassium transporter.	O.I.	C.G.	H.G.

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GSM ID	GSM106913
Assay name	opr3_JA_8 hrs_Rep2
GSE experiment	GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling

Microarray experiments to specifically-expressed genes

GSM ID GSM106913 Assay name opr3_JA_8 hrs_Rep2 GSE experiment GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling

GSM ID GSM106913

Assay name opr3_JA_8 hrs_Rep2

GSE experiment GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling