Microarray experiments to specifically-expressed genes

GSM ID GSM106828
Assay name opr3_0 hr_Rep3
GSE experiment GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
251.8100.0199.1At1g71680843494amino acid transmembrane transporterF:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBVO.I.C.G.H.G.
198.6100.0297.1At1g50310841453STP9 (SUGAR TRANSPORTER 9)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAO.I.C.G.H.G.
197.3100.071.8At2g04675815010unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
183.5100.0106.4At3g12660820446FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)fasciclin-like arabinogalactan-protein, family (FLA14)O.I.C.G.H.G.
183.0100.033.9At2g16120816109mannitol transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAVO.I.C.G.H.G.
182.9100.064.8At5g25550832630leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:biological_process unknown;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
177.3100.0201.0At1g22760838882PAB3 (POLY(A) BINDING PROTEIN 3)Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.O.I.C.G.H.G.
175.9100.0357.9At1g80660844405AHA9F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:proton transport;C:plasma membrane;BMOFPAVO.I.C.G.H.G.
169.7100.0124.2At3g05960819766STP6 (SUGAR TRANSPORTER 6)Encodes a hexose sugar transporter that is expressed in pollen. STP6 may play a role in providing sugars during late pollen maturation or pollen tube germination.O.I.C.G.H.G.
168.9100.0443.9At2g07560815329AHA6 (Arabidopsis H(+)-ATPase 6)F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAVO.I.C.G.H.G.
165.7100.0273.4At2g28355817383LCR5 (Low-molecular-weight cysteine-rich 5)F:molecular_function unknown;P:defense response;C:endomembrane system;PO.I.C.G.H.G.
163.999.9305.3At4g25040828607integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
162.099.976.1At4g10440826636dehydration-responsive family proteinF:unknown;P:unknown;C:unknown;PBOAO.I.C.G.H.G.
159.099.939.9At1g72960843627root hair defective 3 GTP-binding (RHD3) family proteinF:nucleotide binding;P:unknown;C:cellular_component unknown;OFPMBO.I.C.G.H.G.
154.099.9180.8At5g62850836406AtVEX1 (VEGETATIVE CELL EXPRESSED1)Encodes a protein that is expressed in vegetative cells of pollen.O.I.C.G.H.G.
147.499.933.2At1g07850837300transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:N-terminal protein myristoylation;C:chloroplast;MPFOO.I.C.G.H.G.
145.299.997.4At4g25950828701VATG3 (vacuolar ATP synthase G3)V-ATPase G-subunit like proteinO.I.C.G.H.G.
144.699.986.0At3g51070824271dehydration-responsive protein-relatedF:unknown;P:biological_process unknown;C:unknown;MOBFPVAO.I.C.G.H.G.
144.399.9122.9At3g17630821030ATCHX19 (CATION/H+ EXCHANGER 19)member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
143.399.9119.1At2g32890817850RALFL17 (RALF-LIKE 17)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. This gene is contained within a highly AT-rich repetitive sequence region.O.I.C.G.H.G.
136.299.9252.2At4g13230826939late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PMBOFO.I.C.G.H.G.
131.099.9416.7At3g28840822516unknown proteinF:unknown;P:unknown;C:endomembrane system;BOMPFVAO.I.C.G.H.G.
130.399.9143.1At4g16480827346INT4 (INOSITOL TRANSPORTER 4)Encodes a high affinity H+:myo-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of myo-inositol.O.I.C.G.H.G.
128.299.9420.1At5g53820835463unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
126.699.9131.8At4g02140827460unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
122.299.9163.5At2g29790817529-Encodes a Maternally expressed gene (MEG) family protein [pseudogene]O.I.C.G.H.G.
119.499.995.8At3g21970821756receptor-like protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
118.799.9157.4At5g46940834740invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
115.399.9267.0At1g52680841700late embryogenesis abundant protein-related / LEA protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
112.199.9114.1At1g04670839451unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PAFO.I.C.G.H.G.
111.199.976.7At2g22950816826calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7)F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVO.I.C.G.H.G.
109.199.9222.1At4g01470828051TIP1Encodes AtTIP1;3, functions as water and urea channels in pollen.O.I.C.G.H.G.
108.899.998.7At3g19090821444RNA-binding protein, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:ribonucleoprotein complex, nucleus;MPOFBO.I.C.G.H.G.
108.799.9259.6At4g29340829055PRF4 (PROFILIN 4)Profilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining.O.I.C.G.H.G.
105.299.977.4At3g51490824312TMT3 (TONOPLAST MONOSACCHARIDE TRANSPORTER3)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity;P:in 6 processes;C:plant-type vacuole membrane, membrane;BFMPOAO.I.C.G.H.G.
105.199.934.0At4g26830828790catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOO.I.C.G.H.G.
104.499.9218.9At5g44300834453dormancy/auxin associated family proteinF:molecular_function unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
103.599.9102.3At1g52570841689PLDALPHA2 (phosphlipase d alpha 2)member of C2-PLD subfamilyO.I.C.G.H.G.
102.199.9300.0At1g18280838408protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;POBMO.I.C.G.H.G.
101.999.9128.7At2g23800816912GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2)encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthaseO.I.C.G.H.G.
101.499.967.5At5g56330835733ACA8 (ALPHA CARBONIC ANHYDRASE 8)F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process, cyanate metabolic process;C:unknown;MBOPFVAO.I.C.G.H.G.
101.399.990.1At2g17950816305WUS (WUSCHEL)Homeobox gene controlling the stem cell pool. Expressed in the stem cell organizing center of meristems. Required to keep the stem cells in an undifferentiated state. Regulation of WUS transcription is a central checkpoint in stem cell control. The size of the WUS expression domain controls the size of the stem cell population through WUS indirectly activating the expression of CLAVATA3 (CLV3) in the stem cells and CLV3 repressing WUS transcription through the CLV1 receptor kinase signaling pathway. Repression of WUS transcription through AGAMOUS (AG) activity controls stem cell activity in the determinate floral meristem. Binds to TAAT element core motif.O.I.C.G.H.G.
98.999.965.9At2g33690817934late embryogenesis abundant protein, putative / LEA protein, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
98.099.9271.5At4g08670826433protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;OPMBFVO.I.C.G.H.G.
98.099.946.6At5g66020836732ATSAC1B (SUPPRESSOR OF ACTIN 1B)Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.O.I.C.G.H.G.
97.799.953.7At1g07795837294unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
97.099.9130.1At2g16750816176protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
96.499.944.8At4g11030826704long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putativeF:catalytic activity;P:fatty acid biosynthetic process;C:unknown;BOMFPAVO.I.C.G.H.G.
94.699.961.0At1g15460838116BOR4 (REQUIRES HIGH BORON 4)Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions.O.I.C.G.H.G.
94.499.953.3At1g30350839915pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
93.799.9115.0At5g42170834222carboxylesterase/ hydrolase, acting on ester bondsF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:unknown;PBOFVMO.I.C.G.H.G.
93.599.918.8At1g32250840117calmodulin, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOBO.I.C.G.H.G.
93.499.940.8At1g68750843206ATPPC4Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.O.I.C.G.H.G.
93.399.9284.5At3g28810822513unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMBFPVAO.I.C.G.H.G.
92.599.9156.7At3g04620819620nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:unknown;POO.I.C.G.H.G.
90.099.970.7At5g61430836264ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
88.899.9122.8At4g18960827631AG (AGAMOUS)Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.O.I.C.G.H.G.
88.299.959.4At2g04020814928GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:N-terminal protein myristoylation, lipid metabolic process;C:endomembrane system;PBMO.I.C.G.H.G.
86.499.9204.6At5g09550830814RAB GDP-dissociation inhibitorF:RAB GDP-dissociation inhibitor activity;P:regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPBO.I.C.G.H.G.
86.099.957.9At1g26320839174NADP-dependent oxidoreductase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOMFPAO.I.C.G.H.G.
83.299.933.3At5g03250831894phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;PMO.I.C.G.H.G.
82.899.948.4At3g17220820981PMEI2Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates.O.I.C.G.H.G.
82.899.934.3At3g03080821128NADP-dependent oxidoreductase, putativeF:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOFMPAO.I.C.G.H.G.
82.899.933.0At5g25400832612phosphate translocator-relatedF:organic anion transmembrane transporter activity;P:unknown;C:endomembrane system;PMFOBO.I.C.G.H.G.
82.799.945.9At2g15535816046LCR10 (Low-molecular-weight cysteine-rich 10)F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
81.999.974.6At3g08560820003VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2)F:hydrogen-exporting ATPase activity, phosphorylative mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:vacuole, mitochondrial proton-transporting ATP synthase complex;MOFPABO.I.C.G.H.G.
81.899.9263.7At4g11760826782LCR17 (Low-molecular-weight cysteine-rich 17)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.O.I.C.G.H.G.
81.399.9109.3At2g16890816190UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PO.I.C.G.H.G.
81.399.983.0At1g28430839741CYP705A24member of CYP705AO.I.C.G.H.G.
81.199.955.9At5g46200834662unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFO.I.C.G.H.G.
80.199.927.6At3g53080824474galactose-binding lectin family proteinF:sugar binding, beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;POMBO.I.C.G.H.G.
79.099.968.9At3g42850823331galactokinase, putativeF:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOMFPAO.I.C.G.H.G.
77.499.9485.7At5g38760833867unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PFO.I.C.G.H.G.
77.099.986.6At2g30080817559ZIP6member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess.O.I.C.G.H.G.
76.199.924.5At4g35670829719glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMVAO.I.C.G.H.G.
74.999.947.1At3g17720821040pyridoxal-dependent decarboxylase family proteinF:pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, glutamate decarboxylase activity;P:amino acid metabolic process, carboxylic acid metabolic process, glutamate metabolic process;C:unknown;BFPAOMO.I.C.G.H.G.
74.399.937.2At3g10890820259(1-4)-beta-mannan endohydrolase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOAO.I.C.G.H.G.
74.099.9525.8At3g28790822511unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOFBPVAO.I.C.G.H.G.
73.199.9406.6At3g28980822538unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPVAO.I.C.G.H.G.
73.199.957.0At1g54560841898XIEmember of Myosin-like proteinsO.I.C.G.H.G.
72.799.9118.9At2g40460818640proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport, response to nematode;C:membrane;BPMOFO.I.C.G.H.G.
72.399.9530.2At3g28830822515unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;MOBFPVAO.I.C.G.H.G.
71.999.9115.6At3g05180819682GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:apoplast;PBFMOO.I.C.G.H.G.
71.899.952.2At5g03620831777subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
70.299.928.1At5g61700836292ATATH16member of ATH subfamilyO.I.C.G.H.G.
69.999.9151.4At1g23800838991ALDH2B7Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.O.I.C.G.H.G.
69.999.943.3At2g19330816450leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:chloroplast;MPBOFAVO.I.C.G.H.G.
69.699.996.1At1g22730838879MA3 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
69.399.9192.1At5g59120836030ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13)F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
69.099.927.1At2g30290817579vacuolar sorting receptor, putativeF:calcium ion binding;P:protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex;MOPBAO.I.C.G.H.G.
68.799.988.5At5g19600832080SULTR3Encodes sulfate transporter Sultr3;5.O.I.C.G.H.G.
68.599.9454.3At4g13560826989UNE15 (unfertilized embryo sac 15)F:molecular_function unknown;P:embryonic development ending in seed dormancy, double fertilization forming a zygote and endosperm;C:cellular_component unknown;PMBFOO.I.C.G.H.G.
67.499.861.7At5g25880832657ATNADP-ME3 (NADP-malic enzyme 3)The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.O.I.C.G.H.G.
66.699.8207.6At2g19770816496PRF5 (PROFILIN5)Encodes profilin 5, originally named profilin 4 (PRO4/PFN4). Low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Pollen-specific plant profilin present predominantly in mature pollen and growing pollen tubes.O.I.C.G.H.G.
66.599.884.8At1g26480839189GRF12 (GENERAL REGULATORY FACTOR 12)14-3-3 protein GF14iota (grf12)O.I.C.G.H.G.
65.699.8448.3At1g55570842006sks12 (SKU5 Similar 12)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAO.I.C.G.H.G.
65.599.884.1At5g17480831614APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)F:calcium ion binding;P:biological_process unknown;C:cytoplasm;MPFOBO.I.C.G.H.G.
65.499.846.7At3g18360821365VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
65.399.8272.2At5g20240832146PI (PISTILLATA)Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities.O.I.C.G.H.G.
64.299.8210.0At3g28780822510unknown proteinF:molecular_function unknown;P:pollen exine formation;C:endomembrane system;BOMPFVAO.I.C.G.H.G.



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