Microarray experiments to specifically-expressed genes

GSM ID GSM106825
Assay name opr3_0 hr_Rep1
GSE experiment GSE4733: Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
463.2100.0132.7At5g03620831777subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
350.6100.0118.2At5g57810835890TET15 (TETRASPANIN15)Member of TETRASPANIN familyO.I.C.G.H.G.
325.5100.0120.9At5g56330835733ACA8 (ALPHA CARBONIC ANHYDRASE 8)F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process, cyanate metabolic process;C:unknown;MBOPFVAO.I.C.G.H.G.
282.3100.0253.7At1g22760838882PAB3 (POLY(A) BINDING PROTEIN 3)Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.O.I.C.G.H.G.
277.5100.0158.9At3g05960819766STP6 (SUGAR TRANSPORTER 6)Encodes a hexose sugar transporter that is expressed in pollen. STP6 may play a role in providing sugars during late pollen maturation or pollen tube germination.O.I.C.G.H.G.
256.9100.0337.8At1g50310841453STP9 (SUGAR TRANSPORTER 9)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAO.I.C.G.H.G.
241.5100.0143.1At1g28430839741CYP705A24member of CYP705AO.I.C.G.H.G.
210.2100.0184.8At2g23800816912GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2)encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthaseO.I.C.G.H.G.
207.8100.060.6At3g52810824447PAP21 (PURPLE ACID PHOSPHATASE 21)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBMOFAO.I.C.G.H.G.
205.8100.0146.9At3g17630821030ATCHX19 (CATION/H+ EXCHANGER 19)member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
200.9100.0141.1At2g32890817850RALFL17 (RALF-LIKE 17)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. This gene is contained within a highly AT-rich repetitive sequence region.O.I.C.G.H.G.
187.4100.0152.6At1g24400839057LHT2 (LYSINE HISTIDINE TRANSPORTER 2)High-affinity transporter for neutral and acidic amino acids, expressed in tapetum tissue of anthersO.I.C.G.H.G.
186.3100.0405.2At1g18280838408protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;POBMO.I.C.G.H.G.
185.9100.0222.8At5g20710832194BGAL7 (beta-galactosidase 7)F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PMBFOAO.I.C.G.H.G.
184.0100.085.7At2g04020814928GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:N-terminal protein myristoylation, lipid metabolic process;C:endomembrane system;PBMO.I.C.G.H.G.
181.8100.0104.5At3g42850823331galactokinase, putativeF:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOMFPAO.I.C.G.H.G.
178.6100.077.1At3g18360821365VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
175.2100.0133.2At1g52570841689PLDALPHA2 (phosphlipase d alpha 2)member of C2-PLD subfamilyO.I.C.G.H.G.
174.6100.0216.5At5g07540830647GRP16 (GLYCINE-RICH PROTEIN 16)encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12).O.I.C.G.H.G.
169.6100.0107.3At3g08560820003VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2)F:hydrogen-exporting ATPase activity, phosphorylative mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:vacuole, mitochondrial proton-transporting ATP synthase complex;MOFPABO.I.C.G.H.G.
169.1100.097.0At5g61430836264ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
168.6100.032.6At2g16120816109mannitol transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAVO.I.C.G.H.G.
168.0100.097.8At3g51490824312TMT3 (TONOPLAST MONOSACCHARIDE TRANSPORTER3)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity;P:in 6 processes;C:plant-type vacuole membrane, membrane;BFMPOAO.I.C.G.H.G.
164.5100.058.5At4g11030826704long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putativeF:catalytic activity;P:fatty acid biosynthetic process;C:unknown;BOMFPAVO.I.C.G.H.G.
163.099.9473.7At5g53820835463unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
161.299.9112.8At5g07510830644GRP14encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.O.I.C.G.H.G.
158.699.968.4At1g07795837294unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
158.399.9339.4At1g80660844405AHA9F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:proton transport;C:plasma membrane;BMOFPAVO.I.C.G.H.G.
156.499.9146.5At4g02140827460unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
155.399.9341.8At4g08670826433protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;OPMBFVO.I.C.G.H.G.
152.899.9501.3At5g07530830646GRP17 (GLYCINE RICH PROTEIN 17)encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.O.I.C.G.H.G.
146.699.9151.9At4g16480827346INT4 (INOSITOL TRANSPORTER 4)Encodes a high affinity H+:myo-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of myo-inositol.O.I.C.G.H.G.
143.899.965.9At1g30350839915pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
142.899.912.2At1g05577837062unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
140.999.9405.5At2g07560815329AHA6 (Arabidopsis H(+)-ATPase 6)F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAVO.I.C.G.H.G.
139.799.9218.1At1g23240838933caleosin-related family proteinF:lipase activity, calcium ion binding;P:unknown;C:extracellular region;PFOO.I.C.G.H.G.
135.499.937.9At2g30290817579vacuolar sorting receptor, putativeF:calcium ion binding;P:protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex;MOPBAO.I.C.G.H.G.
134.099.942.3At5g03250831894phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;PMO.I.C.G.H.G.
133.999.9247.9At5g44300834453dormancy/auxin associated family proteinF:molecular_function unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
129.899.992.0At4g25950828701VATG3 (vacuolar ATP synthase G3)V-ATPase G-subunit like proteinO.I.C.G.H.G.
129.199.975.8At1g54560841898XIEmember of Myosin-like proteinsO.I.C.G.H.G.
128.599.948.9At3g10890820259(1-4)-beta-mannan endohydrolase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOAO.I.C.G.H.G.
124.299.9282.7At1g47980841216unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO.I.C.G.H.G.
122.299.953.0At5g25550832630leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:biological_process unknown;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
120.599.933.5At2g45040819111matrix metalloproteinaseF:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVFAO.I.C.G.H.G.
119.399.9331.2At5g07560830649GRP20 (GLYCINE-RICH PROTEIN 20)Lipid-binding oleosins, glycine-rich protein.O.I.C.G.H.G.
119.299.9142.3At4g18960827631AG (AGAMOUS)Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.O.I.C.G.H.G.
119.199.976.9At4g10850826682nodulin MtN3 family proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOBO.I.C.G.H.G.
117.999.932.9At1g23590838969unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
116.199.950.8At5g66020836732ATSAC1B (SUPPRESSOR OF ACTIN 1B)Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.O.I.C.G.H.G.
114.299.950.7At1g26610839201zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOFVO.I.C.G.H.G.
111.799.995.2At3g26125822212CYP86C2encodes a protein with cytochrome P450 domainO.I.C.G.H.G.
111.699.994.5At2g17950816305WUS (WUSCHEL)Homeobox gene controlling the stem cell pool. Expressed in the stem cell organizing center of meristems. Required to keep the stem cells in an undifferentiated state. Regulation of WUS transcription is a central checkpoint in stem cell control. The size of the WUS expression domain controls the size of the stem cell population through WUS indirectly activating the expression of CLAVATA3 (CLV3) in the stem cells and CLV3 repressing WUS transcription through the CLV1 receptor kinase signaling pathway. Repression of WUS transcription through AGAMOUS (AG) activity controls stem cell activity in the determinate floral meristem. Binds to TAAT element core motif.O.I.C.G.H.G.
111.599.9135.3At4g20050827750QRT3 (QUARTET 3)Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.O.I.C.G.H.G.
111.499.977.2At5g07520830645GRP18 (GLYCINE-RICH PROTEIN 18)encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12).O.I.C.G.H.G.
110.699.9223.4At2g28355817383LCR5 (Low-molecular-weight cysteine-rich 5)F:molecular_function unknown;P:defense response;C:endomembrane system;PO.I.C.G.H.G.
110.699.962.9At4g10440826636dehydration-responsive family proteinF:unknown;P:unknown;C:unknown;PBOAO.I.C.G.H.G.
109.399.9222.3At4g01470828051TIP1Encodes AtTIP1;3, functions as water and urea channels in pollen.O.I.C.G.H.G.
108.299.928.5At1g07850837300transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:N-terminal protein myristoylation;C:chloroplast;MPFOO.I.C.G.H.G.
108.099.9647.9At3g28830822515unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;MOBFPVAO.I.C.G.H.G.
107.599.937.6At5g25400832612phosphate translocator-relatedF:organic anion transmembrane transporter activity;P:unknown;C:endomembrane system;PMFOBO.I.C.G.H.G.
107.299.9136.8At2g16750816176protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
107.099.920.1At1g32250840117calmodulin, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOBO.I.C.G.H.G.
106.499.9116.2At5g61605836282unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
106.499.922.0At1g23250838934calcium ion bindingF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
106.299.940.0At1g23670838977unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
105.499.9465.5At4g04460825776aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPBO.I.C.G.H.G.
103.999.989.4At3g21970821756receptor-like protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
102.999.932.1At1g72960843627root hair defective 3 GTP-binding (RHD3) family proteinF:nucleotide binding;P:unknown;C:cellular_component unknown;OFPMBO.I.C.G.H.G.
101.899.942.6At1g68750843206ATPPC4Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.O.I.C.G.H.G.
101.299.962.8At1g26320839174NADP-dependent oxidoreductase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOMFPAO.I.C.G.H.G.
101.099.939.3At1g23520838960unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
100.499.9216.6At4g13230826939late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PMBOFO.I.C.G.H.G.
99.299.961.8At5g46200834662unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFO.I.C.G.H.G.
97.199.9602.2At3g28790822511unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOFBPVAO.I.C.G.H.G.
96.899.9143.3At5g62850836406AtVEX1 (VEGETATIVE CELL EXPRESSED1)Encodes a protein that is expressed in vegetative cells of pollen.O.I.C.G.H.G.
94.499.964.4At2g33690817934late embryogenesis abundant protein, putative / LEA protein, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
94.199.9233.5At1g75930843926EXL6member of Lipase proteinsO.I.C.G.H.G.
93.499.9104.2At1g04670839451unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PAFO.I.C.G.H.G.
92.699.917.9At5g6307083642740S ribosomal protein S15, putativeF:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome;BOPMAFO.I.C.G.H.G.
91.599.9348.1At3g28840822516unknown proteinF:unknown;P:unknown;C:endomembrane system;BOMPFVAO.I.C.G.H.G.
91.599.999.5At1g26480839189GRF12 (GENERAL REGULATORY FACTOR 12)14-3-3 protein GF14iota (grf12)O.I.C.G.H.G.
90.199.921.8At4g13960827030F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
89.399.9612.0At2g31980817757cysteine proteinase inhibitor-relatedF:cysteine-type endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;PMOO.I.C.G.H.G.
89.099.9207.6At5g09550830814RAB GDP-dissociation inhibitorF:RAB GDP-dissociation inhibitor activity;P:regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPBO.I.C.G.H.G.
88.499.9274.1At4g11760826782LCR17 (Low-molecular-weight cysteine-rich 17)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.O.I.C.G.H.G.
88.399.9446.8At3g28980822538unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPVAO.I.C.G.H.G.
88.099.9138.8At2g29790817529-Encodes a Maternally expressed gene (MEG) family protein [pseudogene]O.I.C.G.H.G.
86.399.950.6At3g17720821040pyridoxal-dependent decarboxylase family proteinF:pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, glutamate decarboxylase activity;P:amino acid metabolic process, carboxylic acid metabolic process, glutamate metabolic process;C:unknown;BFPAOMO.I.C.G.H.G.
85.099.9509.1At5g38760833867unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PFO.I.C.G.H.G.
82.799.942.0At1g08730837394XICClass XI myosin geneO.I.C.G.H.G.
80.899.9493.4At4g13560826989UNE15 (unfertilized embryo sac 15)F:molecular_function unknown;P:embryonic development ending in seed dormancy, double fertilization forming a zygote and endosperm;C:cellular_component unknown;PMBFOO.I.C.G.H.G.
80.699.949.0At2g29940817544PDR3 (PLEIOTROPIC DRUG RESISTANCE 3)F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPVO.I.C.G.H.G.
79.999.984.6At3g19090821444RNA-binding protein, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:ribonucleoprotein complex, nucleus;MPOFBO.I.C.G.H.G.
79.199.942.6At1g22130838818AGL104 (AGAMOUS-LIKE 104)Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.O.I.C.G.H.G.
78.399.9546.4At5g07550830648GRP19 (GLYCINE-RICH PROTEIN 19)member of Oleosin-like protein familyO.I.C.G.H.G.
77.999.964.2At2g22950816826calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7)F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVO.I.C.G.H.G.
77.599.9143.4At3g04620819620nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:unknown;POO.I.C.G.H.G.
76.999.991.1At5g17480831614APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)F:calcium ion binding;P:biological_process unknown;C:cytoplasm;MPFOBO.I.C.G.H.G.
74.999.9121.1At4g23900828490nucleoside diphosphate kinase 4 (NDK4)F:nucleoside diphosphate kinase activity, ATP binding;P:UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process;C:mitochondrion;BOMPAFVO.I.C.G.H.G.



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