CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM100441

Assay name Rice Azucena 1ppm Arsenate Rep1

GSE experiment GSE4471: Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
142.9 100.0 3.9 Os03g0347500 AK109114.1 - MtN3-like protein 5e-2 At5g13170 SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29) O.I. C.G. H.G.
90.7 100.0 31.8 Os10g0481300 CF291582 - Glutathione S-transferase GSTU31 (Fragment) 3e-2 At5g62480 ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9) O.I. C.G. H.G.
76.1 99.9 55.2 Os09g0367700 AF309377.1 - GST6 protein (EC 2.5.1.18) 5e-4 At1g27130 ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13) O.I. C.G. H.G.
56.4 99.9 6.6 Os03g0283200 AF237487.2 - IN2-1 protein 2e+0 At5g02780 In2-1 protein, putative O.I. C.G. H.G.
54.5 99.9 1.4 Os01g0598000 AK068878.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-4 At4g15550 IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE) O.I. C.G. H.G.
44.3 99.9 72.0 Os10g0528300 AF309378.1 - Tau class GST protein 4 2e-4 At3g43800 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) O.I. C.G. H.G.
43.4 99.9 83.1 Os04g0339400 AK103553.1 - Aldo/keto reductase family protein 1e-5 At1g60690 aldo/keto reductase family protein O.I. C.G. H.G.
36.8 99.8 8.6 Os01g0638000 AK103824.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-2 At1g22380 AtUGT85A3 (UDP-glucosyl transferase 85A3) O.I. C.G. H.G.
34.5 99.8 8.3 Os10g0527400 D10861.1 - Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1) 5e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) O.I. C.G. H.G.
33.6 99.8 52.4 Os03g0154000 AK103088.1 - Aromatic-ring hydroxylase family protein 3e+0 At3g13882 structural constituent of ribosome O.I. C.G. H.G.
33.3 99.8 5.8 Os01g0597800 AK063325.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-5 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) O.I. C.G. H.G.
33.1 99.8 1.4 Os06g0507300 AK111324.1 - GAMYB-binding protein 1e-1 At3g20180 metal ion binding O.I. C.G. H.G.
31.1 99.7 0.2 Os01g0370900 NM_193836.1 - Glutathione-S-transferase 19E50 1e+0 At2g33845 DNA-binding protein-related O.I. C.G. H.G.
30.4 99.7 12.1 Os01g0627400 AK074025.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 4e+0 At3g14630 CYP72A9 O.I. C.G. H.G.
29.5 99.7 1.3 Os02g0818900 AK107997.1 - Heavy metal transport/detoxification proteindomain containing protein 1e-1 At5g11000 unknown protein O.I. C.G. H.G.
28.6 99.6 32.1 Os10g0528400 AF309379.1 - Glutathione S-transferase, C-terminal domaincontaining protein 1e-1 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) O.I. C.G. H.G.
28.1 99.6 78.0 Os10g0530900 AF309376.1 - Glutathione S-transferase GST 30 (EC 2.5.1.18) 2e+0 At1g18680 HNH endonuclease domain-containing protein O.I. C.G. H.G.
28.1 99.6 1.3 Os07g0625400 AK073278.1 - SKP1 component family protein 1e-1 At1g01990 - O.I. C.G. H.G.
27.4 99.6 4.3 Os01g0627600 AK101667.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-2 At3g14630 CYP72A9 O.I. C.G. H.G.
27.4 99.6 3.2 Os07g0418500 AK119557.1 - Cytochrome P450 2e-2 At2g46950 CYP709B2 O.I. C.G. H.G.
26.2 99.5 2.9 Os10g0525500 AK063104.1 - Glutathione S-transferase 5e-4 At5g62480 ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9) O.I. C.G. H.G.
23.6 99.4 32.4 Os09g0518200 AK064395.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-2 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) O.I. C.G. H.G.
22.9 99.3 0.4 Os10g0171500 AK058441.1 - E-class P450, group I family protein 8e-1 At4g16240 unknown protein O.I. C.G. H.G.
21.9 99.3 5.7 Os03g0338000 AK121399.1 - Alanine:glyoxylate aminotransferase-like protein(Fragment) 5e-9 At3g08860 alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative O.I. C.G. H.G.
21.7 99.2 49.4 Os01g0369700 AF309382.1 - Glutathione S-transferase GST 8 (EC 2.5.1.18) 2e+0 At5g53250 AGP22 (ARABINOGALACTAN PROTEIN 22) O.I. C.G. H.G.
21.4 99.2 0.6 Os01g0950000 AK064627.1 - Glutathione S-transferase, C-terminal domaincontaining protein 3e-2 At1g52220 - O.I. C.G. H.G.
20.9 99.2 53.0 Os03g0785900 AK103358.1 - Glutathione S-transferase GST 19 (EC 2.5.1.18) 5e-1 At5g20440 protein binding O.I. C.G. H.G.
20.0 99.1 0.2 Os11g0687800 AK103221.1 - Disease resistance protein family protein 4e-1 At2g27670 unknown protein O.I. C.G. H.G.
19.4 99.0 7.1 Os02g0755900 AK104985.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 8e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) O.I. C.G. H.G.
19.3 99.0 0.8 Os06g0103200 AK103757.1 - - 8e-1 At3g58850 PAR2 (PHY RAPIDLY REGULATED 2) O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.
142.9	100.0	3.9	Os03g0347500	AK109114.1	-	MtN3-like protein	5e-2	At5g13170	SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29)	O.I.	C.G.	H.G.
90.7	100.0	31.8	Os10g0481300	CF291582	-	Glutathione S-transferase GSTU31 (Fragment)	3e-2	At5g62480	ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)	O.I.	C.G.	H.G.
76.1	99.9	55.2	Os09g0367700	AF309377.1	-	GST6 protein (EC 2.5.1.18)	5e-4	At1g27130	ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)	O.I.	C.G.	H.G.
56.4	99.9	6.6	Os03g0283200	AF237487.2	-	IN2-1 protein	2e+0	At5g02780	In2-1 protein, putative	O.I.	C.G.	H.G.
54.5	99.9	1.4	Os01g0598000	AK068878.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	2e-4	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	O.I.	C.G.	H.G.
44.3	99.9	72.0	Os10g0528300	AF309378.1	-	Tau class GST protein 4	2e-4	At3g43800	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	O.I.	C.G.	H.G.
43.4	99.9	83.1	Os04g0339400	AK103553.1	-	Aldo/keto reductase family protein	1e-5	At1g60690	aldo/keto reductase family protein	O.I.	C.G.	H.G.
36.8	99.8	8.6	Os01g0638000	AK103824.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	1e-2	At1g22380	AtUGT85A3 (UDP-glucosyl transferase 85A3)	O.I.	C.G.	H.G.
34.5	99.8	8.3	Os10g0527400	D10861.1	-	Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1)	5e-1	At2g29450	ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)	O.I.	C.G.	H.G.
33.6	99.8	52.4	Os03g0154000	AK103088.1	-	Aromatic-ring hydroxylase family protein	3e+0	At3g13882	structural constituent of ribosome	O.I.	C.G.	H.G.
33.3	99.8	5.8	Os01g0597800	AK063325.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	2e-5	At1g22360	AtUGT85A2 (UDP-glucosyl transferase 85A2)	O.I.	C.G.	H.G.
33.1	99.8	1.4	Os06g0507300	AK111324.1	-	GAMYB-binding protein	1e-1	At3g20180	metal ion binding	O.I.	C.G.	H.G.
31.1	99.7	0.2	Os01g0370900	NM_193836.1	-	Glutathione-S-transferase 19E50	1e+0	At2g33845	DNA-binding protein-related	O.I.	C.G.	H.G.
30.4	99.7	12.1	Os01g0627400	AK074025.1	-	Cytochrome P450 monooxygenase CYP72A5 (Fragment)	4e+0	At3g14630	CYP72A9	O.I.	C.G.	H.G.
29.5	99.7	1.3	Os02g0818900	AK107997.1	-	Heavy metal transport/detoxification proteindomain containing protein	1e-1	At5g11000	unknown protein	O.I.	C.G.	H.G.
28.6	99.6	32.1	Os10g0528400	AF309379.1	-	Glutathione S-transferase, C-terminal domaincontaining protein	1e-1	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	O.I.	C.G.	H.G.
28.1	99.6	78.0	Os10g0530900	AF309376.1	-	Glutathione S-transferase GST 30 (EC 2.5.1.18)	2e+0	At1g18680	HNH endonuclease domain-containing protein	O.I.	C.G.	H.G.
28.1	99.6	1.3	Os07g0625400	AK073278.1	-	SKP1 component family protein	1e-1	At1g01990	-	O.I.	C.G.	H.G.
27.4	99.6	4.3	Os01g0627600	AK101667.1	-	Cytochrome P450 monooxygenase CYP72A5 (Fragment)	1e-2	At3g14630	CYP72A9	O.I.	C.G.	H.G.
27.4	99.6	3.2	Os07g0418500	AK119557.1	-	Cytochrome P450	2e-2	At2g46950	CYP709B2	O.I.	C.G.	H.G.
26.2	99.5	2.9	Os10g0525500	AK063104.1	-	Glutathione S-transferase	5e-4	At5g62480	ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)	O.I.	C.G.	H.G.
23.6	99.4	32.4	Os09g0518200	AK064395.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	1e-2	At1g22340	AtUGT85A7 (UDP-glucosyl transferase 85A7)	O.I.	C.G.	H.G.
22.9	99.3	0.4	Os10g0171500	AK058441.1	-	E-class P450, group I family protein	8e-1	At4g16240	unknown protein	O.I.	C.G.	H.G.
21.9	99.3	5.7	Os03g0338000	AK121399.1	-	Alanine:glyoxylate aminotransferase-like protein(Fragment)	5e-9	At3g08860	alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative	O.I.	C.G.	H.G.
21.7	99.2	49.4	Os01g0369700	AF309382.1	-	Glutathione S-transferase GST 8 (EC 2.5.1.18)	2e+0	At5g53250	AGP22 (ARABINOGALACTAN PROTEIN 22)	O.I.	C.G.	H.G.
21.4	99.2	0.6	Os01g0950000	AK064627.1	-	Glutathione S-transferase, C-terminal domaincontaining protein	3e-2	At1g52220	-	O.I.	C.G.	H.G.
20.9	99.2	53.0	Os03g0785900	AK103358.1	-	Glutathione S-transferase GST 19 (EC 2.5.1.18)	5e-1	At5g20440	protein binding	O.I.	C.G.	H.G.
20.0	99.1	0.2	Os11g0687800	AK103221.1	-	Disease resistance protein family protein	4e-1	At2g27670	unknown protein	O.I.	C.G.	H.G.
19.4	99.0	7.1	Os02g0755900	AK104985.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	8e-1	At1g22340	AtUGT85A7 (UDP-glucosyl transferase 85A7)	O.I.	C.G.	H.G.
19.3	99.0	0.8	Os06g0103200	AK103757.1	-	-	8e-1	At3g58850	PAR2 (PHY RAPIDLY REGULATED 2)	O.I.	C.G.	H.G.

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GSM ID	GSM100441
Assay name	Rice Azucena 1ppm Arsenate Rep1
GSE experiment	GSE4471: Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate

Microarray experiments to specifically-expressed genes

GSM ID GSM100441 Assay name Rice Azucena 1ppm Arsenate Rep1 GSE experiment GSE4471: Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate

GSM ID GSM100441

Assay name Rice Azucena 1ppm Arsenate Rep1

GSE experiment GSE4471: Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate