Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-TABM-63-raw-cel-681137301
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
60.999.882.7At1g61070842399LCR66 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
51.099.8108.2At5g20740832197invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
38.599.8100.0At1g58430842212RXF26Encodes an anther-specific proline-rich protein.O.I.C.G.H.G.
32.399.772.4At4g29700829091type I phosphodiesterase/nucleotide pyrophosphatase family proteinF:hydrolase activity, catalytic activity;P:metabolic process, nucleotide metabolic process;C:vacuole;MBOFPAVO.I.C.G.H.G.
31.099.719.8At4g00870827990basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOO.I.C.G.H.G.
30.299.728.8At3g23770821959glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOO.I.C.G.H.G.
28.999.7110.4At4g20420827790tapetum-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
28.499.753.1At1g02050839280chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOFO.I.C.G.H.G.
27.699.7518.4At5g24770832546VSP2 (VEGETATIVE STORAGE PROTEIN 2)Has acid phosphatase activity dependent on the presence of divalent cations (Mg2+, Co2+, Zn2+, Mn2+) and anti-insect activity. Insects fed with the protein show a retarded development. Induced in response to abscisic acid, jasmonic acid, salt, water deficiency and wounding.O.I.C.G.H.G.
27.099.758.6At4g34850829637chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOFO.I.C.G.H.G.
26.699.789.6At4g14080827044MEE48 (maternal effect embryo arrest 48)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;POO.I.C.G.H.G.
26.299.7374.5At2g20870816620cell wall protein precursor, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMFO.I.C.G.H.G.
25.999.7121.4At5g62080836328protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
24.799.650.5At5g47600834810heat shock protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PBO.I.C.G.H.G.
24.699.6157.5At2g04570814999GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
23.599.634.2At3g15270820758SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5)Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.O.I.C.G.H.G.
23.399.657.3At1g24070839019ATCSLA10encodes a gene similar to cellulose synthaseO.I.C.G.H.G.
23.099.6273.1At1g52030841632MBP2 (MYROSINASE-BINDING PROTEIN 2)Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers.O.I.C.G.H.G.
22.799.6116.0At5g22880832352HTB2Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.O.I.C.G.H.G.
22.799.665.8At4g35420829695dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase familyF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAVO.I.C.G.H.G.
22.799.615.8At3g06160819790transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;POO.I.C.G.H.G.
22.699.646.6At3g11980820372MS2 (MALE STERILITY 2)Similar to fatty acid reductases.O.I.C.G.H.G.
21.699.641.8At1g62940842596ACOS5 (ACYL-COA SYNTHETASE 5)encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.O.I.C.G.H.G.
21.599.657.0At1g02813839360unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;POO.I.C.G.H.G.
21.299.6115.2At2g33810817948SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It binds DNA, may directly regulate AP1, and is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.O.I.C.G.H.G.
20.699.696.3At5g23940832459EMB3009 (embryo defective 3009)F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBOO.I.C.G.H.G.
20.599.639.0At5g55720835666pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
20.599.627.2At4g16270827322peroxidase 40 (PER40) (P40)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
20.399.643.7At5g16920831555-F:molecular_function unknown;P:unknown;C:endomembrane system;POO.I.C.G.H.G.
19.399.640.6At5g43270834345SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2)member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. The genes are characterized by the presence of the SBP-box, which encodes a protein domain, theO.I.C.G.H.G.
19.199.657.0At1g54020841840myrosinase-associated protein, putativeF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBMO.I.C.G.H.G.
18.699.559.3At4g16590827360ATCSLA01encodes a gene similar to cellulose synthaseO.I.C.G.H.G.
18.499.519.3At3g13220820512ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPVO.I.C.G.H.G.
18.399.5170.6At5g22430832304unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
18.399.539.5At1g69500843283electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingF:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAVO.I.C.G.H.G.
18.099.5132.1At4g15210827185BAM5 (BETA-AMYLASE 5)cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.O.I.C.G.H.G.
17.999.560.0At3g52130824377protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
17.999.514.6At5g16190831477ATCSLA11encodes a gene similar to cellulose synthaseO.I.C.G.H.G.
17.799.548.5At2g42200818820SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9)Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b.O.I.C.G.H.G.
17.599.526.3At1g01280839470CYP703A2 (CYTOCHROME P450, FAMILY 703, SUBFAMILY A, POLYPEPTIDE 2)member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).O.I.C.G.H.G.
17.199.525.6At3g53310824499transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:endomembrane system;MBOFPVO.I.C.G.H.G.
17.099.5102.2At5g62210836342embryo-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPOFVBAO.I.C.G.H.G.
17.099.545.8At2g32765817837SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5)Encodes a small ubiquitin-like modifier (SUMO) protein that becomes covalently attached to various intracellular protein targets through an isopeptide bond. SUMOylation typically has a post-translational effect on the behavior of the target protein.O.I.C.G.H.G.
16.999.591.0At5g10400830904histone H3F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPOO.I.C.G.H.G.
16.899.548.0At5g48360834889formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MPOFVBAO.I.C.G.H.G.
16.699.582.8At5g07230830614protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
16.299.526.3At4g02800828171unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFBPVAO.I.C.G.H.G.
16.099.518.9At2g16910816194AMS (ABORTED MICROSPORES)Sporophytic male sterile; MYC Transcription FactorO.I.C.G.H.G.
15.999.564.3At1g69120843244AP1 (APETALA1)Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.O.I.C.G.H.G.
15.999.558.0At3g27360822357histone H3F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPOO.I.C.G.H.G.
15.999.58.6At3g50890824253AtHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PO.I.C.G.H.G.
15.899.544.4At3g42960823352ATA1 (ARABIDOPSIS TAPETUM 1)Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.O.I.C.G.H.G.
15.799.528.3At5g13380831179auxin-responsive GH3 family proteinF:unknown;P:response to auxin stimulus;C:cellular_component unknown;OBPMFO.I.C.G.H.G.
15.699.517.7At4g30130829136unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PMFO.I.C.G.H.G.
15.399.447.9At2g42990818901GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
15.199.417.7At1g20150838605subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
14.499.413.6At3g57920824961SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15)Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b.O.I.C.G.H.G.
14.399.4195.1At3g2850082248060S acidic ribosomal protein P2 (RPP2C)F:structural constituent of ribosome;P:translational elongation;C:cytosol, cytosolic ribosome, ribosome, plasma membrane;MFOPABO.I.C.G.H.G.
14.399.440.6At1g75030843841ATLP-3encodes a PR5-like proteinO.I.C.G.H.G.
14.299.4190.3At5g33370833315GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
14.199.422.0At2g42940818895DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:chloroplast;PBOO.I.C.G.H.G.
14.099.451.6At1g10640837607polygalacturonaseF:polygalacturonase activity;P:carbohydrate metabolic process;C:cellular_component unknown;FPBOMAO.I.C.G.H.G.
13.899.461.5At2g39330818518JAL23 (JACALIN-RELATED LECTIN 23)F:molecular_function unknown;P:biological_process unknown;C:vacuole;POFO.I.C.G.H.G.
13.799.421.1At1g25510839137aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFOO.I.C.G.H.G.
13.799.49.7At1g23340838943unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBO.I.C.G.H.G.
13.499.4146.2At5g08000830694E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.O.I.C.G.H.G.
13.499.49.6At4g12920826904aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFOMO.I.C.G.H.G.
13.399.4405.0At1g24020839014MLP423 (MLP-LIKE PROTEIN 423)F:unknown;P:response to biotic stimulus, defense response;C:membrane;PBOO.I.C.G.H.G.
13.399.420.3At3g11000820271-F:unknown;P:unknown;C:endomembrane system;POBFMVO.I.C.G.H.G.
13.099.421.2At1g27360839625squamosa promoter-binding protein-like 11 (SPL11)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PO.I.C.G.H.G.
12.999.340.5At4g20320827780CTP synthase/ catalyticF:CTP synthase activity, catalytic activity;P:pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process;C:cellular_component unknown;OBMFAPO.I.C.G.H.G.
12.899.352.3At3g10570820222CYP77A6member of CYP77AO.I.C.G.H.G.
12.799.3234.1At3g04290819584LTL1 (LI-TOLERANT LIPASE 1)F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
12.699.336.3At5g60210836143-F:unknown;P:unknown;C:plasma membrane;MOBFPAVO.I.C.G.H.G.
12.699.335.1At1g12570837814glucose-methanol-choline (GMC) oxidoreductase family proteinF:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVAO.I.C.G.H.G.
12.699.331.3At5g50740835146metal ion bindingF:metal ion binding;P:metal ion transport;C:cellular_component unknown;POMBFVO.I.C.G.H.G.
12.699.330.6At4g28680828986tyrosine decarboxylase, putativeEncodes a stress-induced tyrosine decarboxylase (TyrDC). Recombinant (His)6-TyrDC expressed in E. coli catalyzes the conversion of L-tyrosine to tyramine. Recombinant TyrDC forms tetramers.O.I.C.G.H.G.
12.499.393.7At1g70710843408ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1)endo-1,4-beta-glucanase. Involved in cell elongation.O.I.C.G.H.G.
12.099.379.2At4g33260829462CDC20.2putative cdc20 protein (CDC20.2)O.I.C.G.H.G.
11.899.3103.3At5g47500834800pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
11.899.383.9At3g45930823736histone H4F:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;MOPFVO.I.C.G.H.G.
11.899.344.6At3g07450819933protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
11.899.315.4At5g03390831852unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
11.799.366.9At1g14900838055HMGA (HIGH MOBILITY GROUP A)Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.O.I.C.G.H.G.
11.799.338.1At1g68540843183oxidoreductase family proteinF:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAVO.I.C.G.H.G.
11.699.392.7At1g08560837378SYP111 (SYNTAXIN OF PLANTS 111)member of SYP11 Gene FamilyO.I.C.G.H.G.
11.699.362.0At5g44620834490CYP706A3member of CYP706AO.I.C.G.H.G.
11.599.3247.3At4g29030829024glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAO.I.C.G.H.G.
11.599.3139.7At5g08640830765FLS (FLAVONOL SYNTHASE)Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.O.I.C.G.H.G.
11.499.3110.3At3g02110821207scpl25 (serine carboxypeptidase-like 25)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOBO.I.C.G.H.G.
11.499.390.7At5g16250831485unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.399.346.3At1g53160841749SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4)Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.O.I.C.G.H.G.
11.399.328.9At5g25475832622DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PO.I.C.G.H.G.
11.299.2454.3At3g08770820024LTP6Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.O.I.C.G.H.G.
11.199.220.2At2g16270816123unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPVAO.I.C.G.H.G.
11.199.216.3At1g14840838049ATMAP70-4 (microtubule-associated proteins 70-4)Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues.O.I.C.G.H.G.
11.199.213.9At3g55710824737UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMVBOFO.I.C.G.H.G.
11.099.2300.9At4g03210828024XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.O.I.C.G.H.G.
11.099.214.4At3g51290824292proline-rich family proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;MPOBFVAO.I.C.G.H.G.
10.999.283.6At1g47980841216unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO.I.C.G.H.G.



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