Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-TABM-62-raw-cel-720982002
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
85.399.998.0At2g44240819032unknown proteinF:unknown;P:response to oxidative stress;C:endomembrane system;PFBO.I.C.G.H.G.
61.399.8101.1At1g67980843126CCoAMTEncodes S-adenosyl-L-methionine: transcaffeoyl Coenzyme A 3-O-methyltransferase.O.I.C.G.H.G.
49.999.8435.1At2g15130816001plant basic secretory protein (BSP) family proteinF:molecular_function unknown;P:defense response;C:endomembrane system;PFBOO.I.C.G.H.G.
26.499.7174.2At3g18250821353unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFOO.I.C.G.H.G.
25.599.7207.8At1g03850839392glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:response to cytokinin stimulus;C:unknown;PFBO.I.C.G.H.G.
25.299.638.6At4g11000826701ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAO.I.C.G.H.G.
24.399.6300.3At5g10760830943aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFOO.I.C.G.H.G.
23.699.621.8At5g62770836398unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMOFO.I.C.G.H.G.
23.499.6137.4At2g40750818670WRKY54member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
22.499.6389.6At3g57260824893BGL2 (BETA-1,3-GLUCANASE 2)beta 1,3-glucanaseO.I.C.G.H.G.
22.199.659.6At1g09240837444NAS3 (NICOTIANAMINE SYNTHASE 3)Encodes a nicotianamine synthase.O.I.C.G.H.G.
20.199.664.5At5g46050834646PTR3 (PEPTIDE TRANSPORTER 3)Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.O.I.C.G.H.G.
19.899.612.2At1g66960843014lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putativeF:lupeol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:unknown;BPOFMO.I.C.G.H.G.
19.799.679.7At1g01240839274unknown proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;PMBOO.I.C.G.H.G.
17.799.5400.1At5g03350831863legume lectin family proteinF:carbohydrate binding, sugar binding;P:biological_process unknown;C:apoplast, cell wall, chloroplast;PBOO.I.C.G.H.G.
17.499.5195.7At5g24210832488lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POO.I.C.G.H.G.
17.499.530.0At1g34180840317anac016 (Arabidopsis NAC domain containing protein 16)F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;PO.I.C.G.H.G.
16.899.556.0At5g42830834294transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
16.799.533.8At1g23840838995unknown proteinF:unknown;P:unknown;C:endomembrane system;PO.I.C.G.H.G.
16.399.597.5At1g65190842826protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVO.I.C.G.H.G.
16.299.534.4At1g26390839181FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAMO.I.C.G.H.G.
15.999.527.9At5g55560835650protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
15.699.58.1At4g18990827635xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBOAO.I.C.G.H.G.
15.199.465.2At5g22570832320WRKY38member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
14.999.417.7At1g69720843308ho3 (HEME OXYGENASE 3)Encodes a member (HO3) of the heme oxygenase family.O.I.C.G.H.G.
13.699.420.0At2g28710817420zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMOO.I.C.G.H.G.
13.199.454.1At3g26280822231CYP71B4cytochrome P450 monooxygenaseO.I.C.G.H.G.
12.799.339.4At1g74590843799GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
12.599.314.0At1g66860843004hydrolaseF:hydrolase activity;P:glutamine metabolic process, N-terminal protein myristoylation;C:cellular_component unknown;BOPAFO.I.C.G.H.G.
12.199.322.4At4g23880828487unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFO.I.C.G.H.G.
11.899.3158.5At5g10380830902RING1Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators.O.I.C.G.H.G.
11.899.332.2At1g13700837931glucosamine/galactosamine-6-phosphate isomerase family proteinF:6-phosphogluconolactonase activity, catalytic activity;P:pentose-phosphate shunt, carbohydrate metabolic process;C:cellular_component unknown;BOFMPO.I.C.G.H.G.
11.599.3212.0At5g55450835638protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:response to other organism, lipid transport;C:endomembrane system;PO.I.C.G.H.G.
11.499.344.9At2g32680817828AtRLP23 (Receptor Like Protein 23)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
11.199.2144.6At1g08450837365CRT3 (CALRETICULIN 3)Encodes calreticulin CRT3.O.I.C.G.H.G.
10.899.245.8At1g70520843389protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
10.899.213.8At5g38210833803serine/threonine protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
10.799.2146.2At4g05070825849unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
10.799.264.7At2g29350817484SAG13senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenaseO.I.C.G.H.G.
10.799.218.7At3g26230822224CYP71B24putative cytochrome P450O.I.C.G.H.G.
10.599.218.9At2g241603768109-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
10.299.2128.1At4g36670829820mannitol transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAVO.I.C.G.H.G.
10.099.2313.3At2g14560815943LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)Encodes LURP1, a member of the LURP cluster (late upregulated in response to Hyaloperonospora parasitica) which exhibits a pronounced upregulation after recognition of the pathogenic oomycte H. parasitica. LURP1 is required for full basal defense to H. parasitica and resistance to this pathogen mediated by the R-proteins RPP4 and RPP5.O.I.C.G.H.G.
9.999.121.2At4g15260827192UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVFO.I.C.G.H.G.
9.899.185.1At2g26440817184pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
9.899.144.5At5g38900833882DSBA oxidoreductase family proteinF:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMAO.I.C.G.H.G.
9.799.165.6At1g64900842798CYP89A2 (CYTOCHROME P450 89A2)Encodes cytochrome P450 (CYP89A2).O.I.C.G.H.G.
9.699.1406.7At2g14610815949PR1 (PATHOGENESIS-RELATED GENE 1)PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.O.I.C.G.H.G.
9.699.1117.9At3g48640824024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
9.699.144.5At2g18680816383unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
9.599.133.1At4g25000828603AMY1 (ALPHA-AMYLASE-LIKE)Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).O.I.C.G.H.G.
9.599.119.8At3g26220822223CYP71B3cytochrome P450 monooxygenaseO.I.C.G.H.G.
9.499.1152.5At5g22270832287unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
9.399.158.7At1g19610838548PDF1.4Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
9.199.1550.0At1g14870838052-F:molecular_function unknown;P:response to oxidative stress;C:plasma membrane;PMFOO.I.C.G.H.G.
9.099.126.2At2g43980819003AtITPK4 (inositol 1,3,4-trisphosphate 5/6-kinase 4)F:magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity;P:inositol trisphosphate metabolic process;C:intracellular;PMOO.I.C.G.H.G.
8.799.0100.4At1g20630838652CAT1 (CATALASE 1)Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.O.I.C.G.H.G.



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