Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-TABM-62-raw-cel-720975807
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
114.399.9113.5At2g44240819032unknown proteinF:unknown;P:response to oxidative stress;C:endomembrane system;PFBO.I.C.G.H.G.
55.599.896.2At1g67980843126CCoAMTEncodes S-adenosyl-L-methionine: transcaffeoyl Coenzyme A 3-O-methyltransferase.O.I.C.G.H.G.
49.099.827.8At1g66860843004hydrolaseF:hydrolase activity;P:glutamine metabolic process, N-terminal protein myristoylation;C:cellular_component unknown;BOPAFO.I.C.G.H.G.
30.099.724.6At5g62770836398unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMOFO.I.C.G.H.G.
28.099.772.4At5g42830834294transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
27.199.7176.3At3g18250821353unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFOO.I.C.G.H.G.
24.699.642.4At1g26390839181FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAMO.I.C.G.H.G.
23.999.632.9At4g15260827192UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVFO.I.C.G.H.G.
23.899.6300.6At2g15130816001plant basic secretory protein (BSP) family proteinF:molecular_function unknown;P:defense response;C:endomembrane system;PFBOO.I.C.G.H.G.
21.099.665.9At5g46050834646PTR3 (PEPTIDE TRANSPORTER 3)Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.O.I.C.G.H.G.
20.699.610.8At3g21780821732UGT71B6 (UDP-glucosyl transferase 71B6)Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates.O.I.C.G.H.G.
20.499.69.2At4g18990827635xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBOAO.I.C.G.H.G.
20.199.6210.4At5g24210832488lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POO.I.C.G.H.G.
18.499.5163.2At3g48640824024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
17.199.5170.3At1g03850839392glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:response to cytokinin stimulus;C:unknown;PFBO.I.C.G.H.G.
16.199.530.9At4g11000826701ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAO.I.C.G.H.G.
15.599.5158.2At4g36670829820mannitol transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAVO.I.C.G.H.G.
15.399.4237.9At5g10760830943aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFOO.I.C.G.H.G.
15.399.436.7At1g13700837931glucosamine/galactosamine-6-phosphate isomerase family proteinF:6-phosphogluconolactonase activity, catalytic activity;P:pentose-phosphate shunt, carbohydrate metabolic process;C:cellular_component unknown;BOFMPO.I.C.G.H.G.
15.199.417.8At1g69720843308ho3 (HEME OXYGENASE 3)Encodes a member (HO3) of the heme oxygenase family.O.I.C.G.H.G.
14.999.483.5At1g68620843192hydrolaseF:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
14.299.410.4At1g66960843014lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putativeF:lupeol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:unknown;BPOFMO.I.C.G.H.G.
14.099.456.0At3g26280822231CYP71B4cytochrome P450 monooxygenaseO.I.C.G.H.G.
13.799.440.9At1g74590843799GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
13.599.419.9At2g28710817420zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMOO.I.C.G.H.G.
13.399.461.1At5g22570832320WRKY38member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
13.199.469.7At1g19610838548PDF1.4Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
12.899.3294.6At3g57260824893BGL2 (BETA-1,3-GLUCANASE 2)beta 1,3-glucanaseO.I.C.G.H.G.
12.799.323.5At1g57650842141-F:unknown;P:defense response;C:cellular_component unknown;PMBOFAVO.I.C.G.H.G.
12.699.344.9At4g37150829869MES9 (METHYL ESTERASE 9)Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES9 appears to be involved in MeSA hydrolysis in planta. Expression of MES9 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro.O.I.C.G.H.G.
12.699.324.8At5g55560835650protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
12.499.399.9At2g40750818670WRKY54member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
12.299.3148.0At3g49780824140ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR)Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype.O.I.C.G.H.G.
11.999.394.1At2g26440817184pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
11.999.349.0At5g38900833882DSBA oxidoreductase family proteinF:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMAO.I.C.G.H.G.
11.999.343.6At1g09240837444NAS3 (NICOTIANAMINE SYNTHASE 3)Encodes a nicotianamine synthase.O.I.C.G.H.G.
11.999.39.6At3g01080821213WRKY58member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
11.799.329.8At2g43980819003AtITPK4 (inositol 1,3,4-trisphosphate 5/6-kinase 4)F:magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity;P:inositol trisphosphate metabolic process;C:intracellular;PMOO.I.C.G.H.G.
11.699.3170.4At2g43570818959chitinase, putativeF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMVO.I.C.G.H.G.
11.399.330.1At4g29200829041beta-galactosidaseF:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;PO.I.C.G.H.G.
11.099.221.4At4g23880828487unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFO.I.C.G.H.G.
10.999.235.3At2g24240816958potassium channel tetramerisation domain-containing proteinF:protein binding, voltage-gated potassium channel activity;P:potassium ion transport;C:voltage-gated potassium channel complex, membrane;MPOFO.I.C.G.H.G.
10.899.261.0At5g45800834620MEE62 (maternal effect embryo arrest 62)F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:embryonic development ending in seed dormancy, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;PMOBFVAO.I.C.G.H.G.
10.899.250.6At3g13950820608unknown proteinF:molecular_function unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
10.799.2310.8At5g03350831863legume lectin family proteinF:carbohydrate binding, sugar binding;P:biological_process unknown;C:apoplast, cell wall, chloroplast;PBOO.I.C.G.H.G.
10.699.234.6At1g33960840293AIG1 (AVRRPT2-INDUCED GENE 1)Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2O.I.C.G.H.G.
10.499.287.1At3g26170822218CYP71B19putative cytochrome P450O.I.C.G.H.G.
10.499.277.6At1g65190842826protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVO.I.C.G.H.G.
10.299.234.0At2g29990817549NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2)F:NADH dehydrogenase activity, oxidoreductase activity, FAD binding;P:unknown;C:intrinsic to mitochondrial inner membrane;BOFPAMO.I.C.G.H.G.
10.099.262.5At2g29350817484SAG13senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenaseO.I.C.G.H.G.
10.099.222.7At1g34180840317anac016 (Arabidopsis NAC domain containing protein 16)F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;PO.I.C.G.H.G.
9.899.1106.5At1g20630838652CAT1 (CATALASE 1)Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.O.I.C.G.H.G.
9.899.117.9At3g26230822224CYP71B24putative cytochrome P450O.I.C.G.H.G.
9.799.1291.1At1g75040843842PR5 (PATHOGENESIS-RELATED GENE 5)Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.O.I.C.G.H.G.
9.799.1134.7At1g08450837365CRT3 (CALRETICULIN 3)Encodes calreticulin CRT3.O.I.C.G.H.G.
9.699.1407.1At2g14610815949PR1 (PATHOGENESIS-RELATED GENE 1)PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.O.I.C.G.H.G.
9.599.1162.0At2g43510818952ATTI1Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.O.I.C.G.H.G.
9.599.157.3At3g60690825240auxin-responsive family proteinF:unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
9.599.123.7At1g70690843406HWI1 (HOPW1-1-INDUCED GENE1)Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.O.I.C.G.H.G.
9.499.167.5At1g10140837551-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POO.I.C.G.H.G.
9.499.149.8At2g31945817753unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
9.499.125.1At1g03950839362VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3)F:unknown;P:vesicle-mediated transport;C:ESCRT III complex;MPFOBO.I.C.G.H.G.
9.099.128.2At1g76360843968protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVAO.I.C.G.H.G.
8.999.041.7At1g70520843389protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
8.899.039.8At1g23850838996unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
8.899.029.4At2g47130819326short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
8.899.024.5At1g23840838995unknown proteinF:unknown;P:unknown;C:endomembrane system;PO.I.C.G.H.G.
8.899.019.1At3g26220822223CYP71B3cytochrome P450 monooxygenaseO.I.C.G.H.G.
8.799.015.7At4g11300826732unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOO.I.C.G.H.G.
8.699.0196.3At2g26560817197PLA2A (PHOSPHOLIPASE A 2A)encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells.O.I.C.G.H.G.
8.699.088.5At1g70290843365ATTPS8Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.O.I.C.G.H.G.



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