Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-TABM-61-raw-cel-683343624
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
57.899.869.3At5g44570834484unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
41.199.889.1At3g48850824046mitochondrial phosphate transporter, putativeF:binding;P:transport;C:mitochondrial inner membrane, chloroplast, membrane;MFPOO.I.C.G.H.G.
36.999.7146.0At2g04450814985ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6)F:ADP-ribose diphosphatase activity, hydrolase activity, NAD or NADH binding;P:response to other organism;C:cytosol;OBMPAFVO.I.C.G.H.G.
25.899.778.4At3g13950820608unknown proteinF:molecular_function unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
24.799.672.4At1g02450837800NIMIN1 (NIM1-INTERACTING 1)NIMIN1 modulates PR gene expression according the following model: NPR1 forms a ternary complex with NIMIN1 and TGA factors upon SAR induction that binds to a positive regulatory cis-element of the PR-1 promoter, termed LS7. This leads to PR-1 gene induction. NIMIN1 decreases transcriptional activation, possibly through its EAR motif, which results in fine-tuning of PR-1 gene expression.O.I.C.G.H.G.
22.399.6140.9At2g03760814903STEncodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.O.I.C.G.H.G.
21.999.6114.0At3g57240824891BG3 (BETA-1,3-GLUCANASE 3)encodes a member of glycosyl hydrolase family 17O.I.C.G.H.G.
21.599.6285.9At2g15130816001plant basic secretory protein (BSP) family proteinF:molecular_function unknown;P:defense response;C:endomembrane system;PFBOO.I.C.G.H.G.
20.199.685.0At1g13470837907unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
19.799.685.1At2g30770817628CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13)putative cytochrome P450O.I.C.G.H.G.
19.199.634.3At2g04070814943antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:transport, multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
18.599.562.8At5g54610835550ANK (ankyrin)Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family.O.I.C.G.H.G.
18.499.579.3At1g32350840127AOX1D (alternative oxidase 1D)F:alternative oxidase activity;P:oxidation reduction, response to cyclopentenone;C:mitochondrial envelope, mitochondrion;OPFBMO.I.C.G.H.G.
18.099.5106.7At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseO.I.C.G.H.G.
17.799.588.5At1g64900842798CYP89A2 (CYTOCHROME P450 89A2)Encodes cytochrome P450 (CYP89A2).O.I.C.G.H.G.
17.699.5114.2At2g26440817184pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
17.399.532.9At1g78450844181SOUL heme-binding family proteinF:binding;P:biological_process unknown;C:endomembrane system;OMPBAO.I.C.G.H.G.
16.999.5115.2At1g05680837075UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
16.899.584.3At4g17260827440L-lactate dehydrogenase, putativeF:in 6 functions;P:response to salt stress, response to abscisic acid stimulus;C:plasma membrane;BOMFPAO.I.C.G.H.G.
15.499.517.2At1g52770841710phototropic-responsive NPH3 family proteinF:signal transducer activity;P:response to light stimulus;C:cellular_component unknown;PO.I.C.G.H.G.
14.399.458.1At5g52810835358ornithine cyclodeaminase/mu-crystallin family proteinF:structural constituent of eye lens, binding, catalytic activity;P:arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process;C:chloroplast;BOMAFPO.I.C.G.H.G.
14.199.453.8At2g18680816383unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
13.899.4194.9At2g37710818348RLK (receptor lectin kinase)Induced in response to Salicylic acid.O.I.C.G.H.G.
13.899.428.6At4g11000826701ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAO.I.C.G.H.G.
13.699.4159.5At2g41730818772unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
13.699.473.9At3g27280822347ATPHB4 (PROHIBITIN 4)Part of protein complexes that are necessary for proficient mitochondrial function or biogenesis, thereby supporting cell division and differentiation in apical tissuesO.I.C.G.H.G.
13.499.469.8At4g27585828868band 7 family proteinF:unknown;P:biological_process unknown;C:mitochondrion, plastid, membrane;BOMPAFVO.I.C.G.H.G.
12.899.353.9At1g32940840188SBT3.5F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFMO.I.C.G.H.G.
12.799.3124.2At5g13200831159GRAM domain-containing protein / ABA-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
12.399.3107.0At4g37370829891CYP81D8member of CYP81DO.I.C.G.H.G.
12.199.314.5At1g31680--O.I.C.G.H.G.
11.899.376.6At1g30250839905unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
11.599.345.4At1g23850838996unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.199.2126.6At3g48640824024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
10.999.217.9At4g31980829328unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBO.I.C.G.H.G.
10.899.2195.6At5g19240832044unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
10.799.227.0At1g23840838995unknown proteinF:unknown;P:unknown;C:endomembrane system;PO.I.C.G.H.G.
10.699.228.4At2g39710818555aspartyl protease family proteinEncodes a Cysteine-rich peptide (CRP) family proteinO.I.C.G.H.G.
10.599.2202.6At5g55450835638protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:response to other organism, lipid transport;C:endomembrane system;PO.I.C.G.H.G.
10.599.221.8At4g39740830129electron transport SCO1/SenC family proteinF:molecular_function unknown;P:unknown;C:unknown;BOMFPAO.I.C.G.H.G.
10.499.291.5At2g40750818670WRKY54member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
10.499.245.7At5g38900833882DSBA oxidoreductase family proteinF:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMAO.I.C.G.H.G.
10.399.2108.8At3g18250821353unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFOO.I.C.G.H.G.
10.399.252.2At2g35980818171YLS9 (YELLOW-LEAF-SPECIFIC GENE 9)Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.O.I.C.G.H.G.
10.199.216.8At5g55420835635-Encodes a Protease inhibitor/seed storage/LTP family protein [pseudogene]O.I.C.G.H.G.
9.999.132.3At4g22530828348embryo-abundant protein-relatedF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOAO.I.C.G.H.G.
9.799.18.1At2g385203767738transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
9.699.1131.9At3g07390819927AIR12isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.O.I.C.G.H.G.
9.499.155.2At5g19980832120integral membrane family proteinF:unknown;P:unknown;C:endomembrane system, membrane;PMFOBO.I.C.G.H.G.
9.399.146.9At1g64890842797integral membrane transporter family proteinF:transporter activity;P:transport;C:membrane;BOPMAFO.I.C.G.H.G.
9.399.128.2At4g03450827913ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPFBVAO.I.C.G.H.G.
9.399.19.7At1g22900838897-F:molecular_function unknown;P:defense response;C:endomembrane system;PO.I.C.G.H.G.
9.299.196.8At3g26830822298PAD3 (PHYTOALEXIN DEFICIENT 3)Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.O.I.C.G.H.G.
9.199.160.8At1g22070838812TGA3Encodes a transcription factor. Like other TGAla-related factors, TGA3 has a highly conserved bZIP region and exhibits similar DNA-binding properties.O.I.C.G.H.G.
9.199.128.8At1g03660839033-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.199.19.1At3g25020822093AtRLP42 (Receptor Like Protein 42)F:protein binding;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
9.099.1183.1At5g10760830943aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFOO.I.C.G.H.G.
9.099.173.5At5g39050833897transferase/ transferase, transferring acyl groups other than amino-acyl groupsF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
8.999.011.9At5g12930831133unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABFO.I.C.G.H.G.
8.899.038.6At3g47380823892invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
8.899.036.3At1g31690840056amine oxidase/ copper ion binding / quinone bindingF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAO.I.C.G.H.G.
8.899.027.2At3g20590821606non-race specific disease resistance protein, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
8.899.026.2At5g60800836201heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:unknown;POMFBVAO.I.C.G.H.G.
8.799.0158.0At5g26340832703MSS1Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.O.I.C.G.H.G.



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