Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-TABM-61-raw-cel-683343528
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
66.299.8113.2At3g48850824046mitochondrial phosphate transporter, putativeF:binding;P:transport;C:mitochondrial inner membrane, chloroplast, membrane;MFPOO.I.C.G.H.G.
54.299.8184.8At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseO.I.C.G.H.G.
48.699.8208.1At2g03760814903STEncodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.O.I.C.G.H.G.
27.099.7137.7At4g05020825844NDB2 (NAD(P)H dehydrogenase B2)F:disulfide oxidoreductase activity, oxidoreductase activity, FAD binding;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion;BOFPAMO.I.C.G.H.G.
22.799.6110.3At1g66690842987S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFO.I.C.G.H.G.
20.399.629.7At1g57650842141-F:unknown;P:defense response;C:cellular_component unknown;PMBOFAVO.I.C.G.H.G.
19.799.638.9At1g32870840181ANAC13 (Arabidopsis thaliana NAC domain protein 13)F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMFO.I.C.G.H.G.
18.999.5160.2At4g03060828102AOP2 (ALKENYL HYDROXALKYL PRODUCING 2)Encodes a truncated and null function protein, due to a 5-bp deletion in cDNA. The functional allele in ecotype Cvi, AOP2, encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of alkenyl glucosinolate among different ecotypes of Arabidopsis.O.I.C.G.H.G.
18.599.512.2At2g36750818247UGT73C1 (UDP-GLUCOSYL TRANSFERASE 73C1)F:cis-zeatin O-beta-D-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, trans-zeatin O-beta-D-glucosyltransferase activity;P:response to UV-B;C:unknown;PMVBOFO.I.C.G.H.G.
18.099.537.3At3g44430823568unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
18.099.523.6At3g57770824946protein kinase, putativeF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVAO.I.C.G.H.G.
17.599.5181.4At2g41730818772unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
16.999.567.9At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.O.I.C.G.H.G.
16.599.546.6At3g61630825336CRF6 (CYTOKININ RESPONSE FACTOR 6)CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.O.I.C.G.H.G.
15.799.583.2At2g15560816049-F:unknown;P:response to oxidative stress;C:cellular_component unknown;PMFBOO.I.C.G.H.G.
15.699.535.0At1g08890837410sugar transporter family proteinF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:chloroplast, membrane;MFBPOAO.I.C.G.H.G.
15.599.582.9At1g64900842798CYP89A2 (CYTOCHROME P450 89A2)Encodes cytochrome P450 (CYP89A2).O.I.C.G.H.G.
15.399.494.1At1g65190842826protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVO.I.C.G.H.G.
14.799.442.9At5g15360831388unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
14.799.423.6At4g00234826310-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
14.399.4106.0At1g05680837075UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
14.199.471.7At4g27585828868band 7 family proteinF:unknown;P:biological_process unknown;C:mitochondrion, plastid, membrane;BOMPAFVO.I.C.G.H.G.
14.199.452.6At2g36790818251UGT73C6 (UDP-glucosyl transferase 73C6)The At2g36790 gene encodes a UDP-glucose:flavonol-3-O-glycoside-7-O-glucosyltransferase (UGT73C6)attaching a glucosyl residue to the 7-O-position of the flavonols kaempferol, quercetin and their 3-O-glycoside derivatives.O.I.C.G.H.G.
12.799.3108.8At4g37370829891CYP81D8member of CYP81DO.I.C.G.H.G.
12.799.323.9At4g39740830129electron transport SCO1/SenC family proteinF:molecular_function unknown;P:unknown;C:unknown;BOMFPAO.I.C.G.H.G.
12.699.3113.0At3g26830822298PAD3 (PHYTOALEXIN DEFICIENT 3)Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.O.I.C.G.H.G.
12.699.330.0At1g74870843826protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.
12.599.323.7At4g15260827192UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVFO.I.C.G.H.G.
11.999.331.8At1g48370841257YSL8 (YELLOW STRIPE LIKE 8)Arabidopsis thaliana metal-nicotianamine transporter YSL4O.I.C.G.H.G.
11.899.371.0At2g21530816692forkhead-associated domain-containing protein / FHA domain-containing proteinF:unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast stroma, chloroplast;BPOAMO.I.C.G.H.G.
11.699.3196.3At3g22370821806AOX1A (ALTERNATIVE OXIDASE 1A)Encodes an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited.O.I.C.G.H.G.
11.399.364.5At2g30770817628CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13)putative cytochrome P450O.I.C.G.H.G.
11.399.321.8At5g64230836544unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMO.I.C.G.H.G.
11.199.224.2At5g09820830842plastid-lipid associated protein PAP / fibrillin family proteinF:structural molecule activity;P:biological_process unknown;C:chloroplast;PBO.I.C.G.H.G.
10.899.235.0At1g07050837216CONSTANS-like protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFO.I.C.G.H.G.
10.499.257.1At5g51830835258pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:response to cadmium ion;C:cellular_component unknown;BOPAMFO.I.C.G.H.G.
10.099.250.1At5g33290833302XGD1 (XYLOGALACTURONAN DEFICIENT 1)Acts as a xylogalacturonan xylosyltransferase within the XGA biosynthesis pathway. Involved in pectin biosynthesis.O.I.C.G.H.G.
10.099.213.6At1g24090839020RNase H domain-containing proteinF:ribonuclease H activity, nucleic acid binding;P:biological_process unknown;C:unknown;PBOAMO.I.C.G.H.G.
9.899.148.3At3g13950820608unknown proteinF:molecular_function unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
9.899.143.6At3g28930822529AIG2 (AVRRPT2-INDUCED GENE 2)avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2O.I.C.G.H.G.
9.399.174.7At5g39050833897transferase/ transferase, transferring acyl groups other than amino-acyl groupsF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
9.299.186.1At2g40750818670WRKY54member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
9.299.138.8At2g04050814939MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
9.299.16.2At4g18990827635xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBOAO.I.C.G.H.G.
9.199.1162.0At5g26340832703MSS1Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.O.I.C.G.H.G.
9.099.1116.6At2g39030818489GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPAO.I.C.G.H.G.
9.099.123.7At2g45560819164CYP76C1cytochrome P450 monooxygenaseO.I.C.G.H.G.
8.999.022.5At2g15390816031FUT4Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1.O.I.C.G.H.G.
8.899.073.7At3g49620824124DIN11 (DARK INDUCIBLE 11)encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.O.I.C.G.H.G.
8.899.055.6At4g18880827622AT-HSFA4Amember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
8.899.019.2At5g59000836017zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBAO.I.C.G.H.G.
8.899.013.0At2g25640817105zinc ion bindingF:zinc ion binding;P:transcription;C:nucleus;MFBPOO.I.C.G.H.G.
8.799.0138.1At5g24210832488lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POO.I.C.G.H.G.
8.799.063.2At3g53180824484catalytic/ glutamate-ammonia ligaseF:glutamate-ammonia ligase activity, catalytic activity;P:nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process;C:unknown;BOAFMPO.I.C.G.H.G.
8.799.035.4At1g78995844240unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
8.799.017.8At1g28610839761GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBMO.I.C.G.H.G.
8.699.033.7At1g14230837984nucleoside phosphatase family protein / GDA1/CD39 family proteinF:hydrolase activity;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage