Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-TABM-52-raw-cel-1583683566
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
76.699.9114.9At1g10550837596XTH33Encodes a membrane-localized protein that is predicted to function during cell wall modification.Overexpression of XTH33 results in abnormal cell morphology. It's expression is under epigenetic control by ATX1.O.I.C.G.H.G.
46.899.854.1At1g78450844181SOUL heme-binding family proteinF:binding;P:biological_process unknown;C:endomembrane system;OMPBAO.I.C.G.H.G.
26.999.726.5At1g70985843437hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PMBFOVAO.I.C.G.H.G.
25.099.620.9At1g31680--O.I.C.G.H.G.
21.999.634.7At5g23870832452pectinacetylesterase family proteinF:carboxylesterase activity;P:biological_process unknown;C:plant-type cell wall;PMOBO.I.C.G.H.G.
16.699.5271.5At3g22840821855ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN)Encodes an early light-inducible protein.O.I.C.G.H.G.
16.499.5112.3At5g65470836672unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
15.399.487.7At5g51820835257PGM (PHOSPHOGLUCOMUTASE)Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.O.I.C.G.H.G.
14.699.4177.0At5g66530836785aldose 1-epimerase family proteinF:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, carbohydrate metabolic process;C:apoplast, chloroplast, chloroplast stroma;BOPFMO.I.C.G.H.G.
14.599.482.4At1g31190840007IMPL1 (MYO-INOSITOL MONOPHOSPHATASE LIKE 1)Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).O.I.C.G.H.G.
13.899.454.0At1g56050842056GTP-binding protein-relatedF:GTP binding;P:biological_process unknown;C:chloroplast, chloroplast stroma;OBMFAPO.I.C.G.H.G.
13.599.466.5At4g00490827959BAM2 (BETA-AMYLASE 2)Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.O.I.C.G.H.G.
13.499.429.5At4g38400829997ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2)member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)O.I.C.G.H.G.
12.999.330.8At1g58025842169DNA bindingF:DNA binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVO.I.C.G.H.G.
12.799.3416.9At4g12470826859protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:defense response to fungus, lipid transport;C:endomembrane system;PBOVMFAO.I.C.G.H.G.
12.799.3233.3At2g42530818853COR15B (COLD REGULATED 15B)F:unknown;P:response to cold;C:chloroplast, chloroplast stroma, chloroplast envelope;PBOMFO.I.C.G.H.G.
12.299.388.2At4g27720828886-F:unknown;P:unknown;C:plasma membrane;BPMOFAO.I.C.G.H.G.
12.199.324.3At3g20270821571lipid-binding serum glycoprotein family proteinF:lipid binding;P:biological_process unknown;C:unknown;MPOAO.I.C.G.H.G.
12.099.342.5At1g31690840056amine oxidase/ copper ion binding / quinone bindingF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAO.I.C.G.H.G.
11.699.334.0At5g64050836526ERS (GLUTAMATE TRNA SYNTHETASE)Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.O.I.C.G.H.G.
11.699.317.5At5g55580835652mitochondrial transcription termination factor family protein / mTERF family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMOFVBO.I.C.G.H.G.
11.199.260.1At4g02330828064ATPMEPCRBF:pectinesterase activity;P:response to salt stress;C:endomembrane system, cell wall;PBFAOMO.I.C.G.H.G.
10.699.269.0At2g36145818187unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast stroma, chloroplast;PO.I.C.G.H.G.
10.499.288.3At5g06530830541ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:plasma membrane;BOMFAPVO.I.C.G.H.G.
10.199.270.7At2g21280816667SULAA nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.O.I.C.G.H.G.
10.199.233.1At2g35290818096unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
10.099.248.3At3g06770819862glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:response to cyclopentenone, carbohydrate metabolic process;C:unknown;PBFOMAO.I.C.G.H.G.
9.799.1185.2At1g17100838280SOUL heme-binding family proteinF:binding;P:biological_process unknown;C:plasma membrane, vacuole;OMPBAO.I.C.G.H.G.
9.799.146.0At4g39960830157DNAJ heat shock family proteinF:unfolded protein binding, heat shock protein binding, ATP binding;P:protein folding, response to heat;C:chloroplast thylakoid membrane, chloroplast;OBMFPAVO.I.C.G.H.G.
9.599.119.6At5g55570835651unknown proteinF:unknown;P:unknown;C:chloroplast;PMO.I.C.G.H.G.
9.299.141.9At4g03400827938DFL2 (DWARF IN LIGHT 2)Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.O.I.C.G.H.G.
9.199.1110.9At4g03060828102AOP2 (ALKENYL HYDROXALKYL PRODUCING 2)Encodes a truncated and null function protein, due to a 5-bp deletion in cDNA. The functional allele in ecotype Cvi, AOP2, encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of alkenyl glucosinolate among different ecotypes of Arabidopsis.O.I.C.G.H.G.
8.699.054.4At5g14660831318PDF1B (PEPTIDE DEFORMYLASE 1B)encodes a peptide deformylase-like proteinO.I.C.G.H.G.



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