Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-TABM-209-raw-cel-1316546535
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
105.299.9134.0At1g54020841840myrosinase-associated protein, putativeF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBMO.I.C.G.H.G.
94.399.9160.8At2g39330818518JAL23 (JACALIN-RELATED LECTIN 23)F:molecular_function unknown;P:biological_process unknown;C:vacuole;POFO.I.C.G.H.G.
78.399.962.4At1g06160837125ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.O.I.C.G.H.G.
74.899.93.6At2g151903768611transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
67.499.83.6At1g32670840161unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
62.799.86.1At1g32000840091-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
62.399.8451.5At2g26020817143PDF1.2b (plant defensin 1.2b)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
59.899.8179.1At1g66690842987S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFO.I.C.G.H.G.
55.999.8123.2At1g52000841629jacalin lectin family proteinF:molecular_function unknown;P:response to salt stress;C:cellular_component unknown;BOMPFVAO.I.C.G.H.G.
52.299.85.0At2g104903768467transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
45.499.8107.3At4g14090827046UDP-glucoronosyl/UDP-glucosyl transferase family proteinThe At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring.O.I.C.G.H.G.
44.599.8372.4At5g44420834469PDF1.2Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
41.799.8152.5At1g52410841671TSA1 (TSK-ASSOCIATING PROTEIN 1)Contains a novel calcium-binding repeat sequence. Binds TSK in vitro. Localizes to small cytoplasmic vesicles in interphase cells. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. May be involved in mitosis together with TSK. Expressed preferentially in the flower and shoot apex. Can form multimers.O.I.C.G.H.G.
40.699.8113.7At1g68600843190unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPFOO.I.C.G.H.G.
40.699.8102.9At4g27300828838S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
36.799.7334.7At1g19670838554ATCLH1 (ARABIDOPSIS THALIANA CORONATINE-INDUCED PROTEIN 1)Chlorophyllase is the first enzyme involved in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to yield chlorophyllide and phytol. AtCLH1 lacks a typical signal sequence for the chloroplast. Its expression is induced rapidly by methyljasmonate, a known promoter of senescence and chlorophyll degradation.O.I.C.G.H.G.
33.699.7130.4At5g17220831586ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems.O.I.C.G.H.G.
33.699.72.5At3g297323769027transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
31.899.755.5At2g47880819400glutaredoxin family proteinF:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBOO.I.C.G.H.G.
29.999.7128.1At1g64360842743unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;PO.I.C.G.H.G.
29.999.75.1At1g67780843103-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.C.G.H.G.
29.399.75.5At1g47300841133F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBAO.I.C.G.H.G.
29.399.74.0At3g42400823236transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
27.399.78.0At5g324603771028DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknownO.I.C.G.H.G.
26.499.76.7At2g30760817627unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
26.299.74.6At5g40560834054DegP13 (DegP protease 13)Encodes a putative DegP protease.O.I.C.G.H.G.
25.699.7136.9At4g15440827215HPL1 (HYDROPEROXIDE LYASE 1)Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase.O.I.C.G.H.G.
25.699.75.1At2g06630815222transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
25.099.6201.8At3g28220822448meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:response to salt stress;C:vacuole, chloroplast envelope;PMOO.I.C.G.H.G.
24.899.672.1At1g034953766646transferase/ transferase, transferring acyl groups other than amino-acyl groupsF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFO.I.C.G.H.G.
24.699.6113.8At4g12280826837copper amine oxidase family proteinF:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:cellular_component unknown;FBMOPAO.I.C.G.H.G.
23.699.67.4At1g63190842623-F:molecular_function unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.H.G.
23.199.64.6At3g44080823526F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
22.999.666.7At5g19460832066atnudt20 (Arabidopsis thaliana Nudix hydrolase homolog 20)F:hydrolase activity;P:biological_process unknown;C:chloroplast;BFOMPO.I.C.G.H.G.
22.499.625.9At1g18710838453AtMYB47 (myb domain protein 47)Member of the R2R3 factor gene family.O.I.C.G.H.G.
22.399.64.8At2g26160817156-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
22.399.62.8At2g122303768490-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
22.099.62.0At1g56530842106hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
21.999.637.7At2g36970818271UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBVOFO.I.C.G.H.G.
21.699.647.7At4g33980829544unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMOO.I.C.G.H.G.
21.499.63.8At5g37960833775oxidoreductase-relatedF:oxidoreductase activity, zinc ion binding;P:N-terminal protein myristoylation;C:cellular_component unknown;BOPMFAO.I.C.G.H.G.
21.299.6179.1At2g39030818489GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPAO.I.C.G.H.G.
21.199.6157.0At1g80130844353bindingF:binding;P:response to oxidative stress;C:membrane;BPOMFAVO.I.C.G.H.G.
20.999.648.6At1g07050837216CONSTANS-like protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFO.I.C.G.H.G.
20.999.64.7At3g323003769265transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
20.799.65.1At2g05290815077transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
20.599.62.9At3g28380822467PGP17 (P-GLYCOPROTEIN 17)F:ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:transport;C:plasma membrane;BOMAFPVO.I.C.G.H.G.
20.499.64.5At5g35470833510unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
20.399.67.9At5g03590831783GDSL-motif lipase/hydrolase protein-relatedF:hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:cellular_component unknown;PFO.I.C.G.H.G.
20.299.64.9At2g18640816379GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4)Encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthaseO.I.C.G.H.G.
20.099.638.6At4g12300826839CYP706A4member of CYP706AO.I.C.G.H.G.
19.799.66.3At1g54923841931transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
19.699.64.3At1g12490837806F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
19.399.63.6At3g27590822381unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
19.199.67.5At1g12210837774RFL1 (RPS5-like 1)RFL1 has high sequence similarity to the adjacent disease resistance (R) gene RPS5.O.I.C.G.H.G.
18.799.570.7At5g16570831519GLN1Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammoniumO.I.C.G.H.G.
18.399.534.2At2g39850818572identical protein binding / serine-type endopeptidaseF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAMO.I.C.G.H.G.
18.299.54.4At2g061103768364transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
18.299.52.3At4g076203770532transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
17.999.52.7At3g45380823676transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
17.799.5114.1At1g32640840158MYC2Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue light–mediated photomorphogenic growth and blue and far-red-light–regulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.O.I.C.G.H.G.
17.599.512.7At2g37580818334zinc finger (C3HC4-type RING finger) family proteinF:protein binding, transferase activity, transferring glycosyl groups, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
17.599.58.7At3g43930823509-F:molecular_function unknown;P:biological_process unknown;C:intracellular;MFPOO.I.C.G.H.G.
17.399.55.2At3g29791822691unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
17.099.559.3At1g02300839576cathepsin B-like cysteine protease, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis, regulation of catalytic activity;C:endomembrane system;MOPVBAFO.I.C.G.H.G.
16.999.5234.4At1g52030841632MBP2 (MYROSINASE-BINDING PROTEIN 2)Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers.O.I.C.G.H.G.
16.999.53.5At4g36370829789unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.899.512.8At1g14070837967FUT7member of Xyloglucan fucosyltransferase familyO.I.C.G.H.G.
16.799.5125.6At5g47240834771atnudt8 (Arabidopsis thaliana Nudix hydrolase homolog 8)F:hydrolase activity;P:response to wounding;C:cytosol;BOMPAFVO.I.C.G.H.G.
16.799.57.5At3g23720821953transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
16.599.5139.9At3g52180824383SEX4 (STARCH-EXCESS 4)Encodes a plant-specific protein phosphatase that contains a protein tyrosine phosphatase (PTP) catalytic domain and a kinase interaction sequence (KIS) domain. This protein interacts with the plant SnRK AKIN11. Binds starch. Localized in the chloroplast.O.I.C.G.H.G.
16.199.511.2At1g69610843297structural constituent of ribosomeF:structural constituent of ribosome;P:N-terminal protein myristoylation, translation;C:ribosome, intracellular;OPMFBO.I.C.G.H.G.
16.099.57.2At5g64800836601CLE21 (CLAVATA3/ESR-RELATED 21)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.O.I.C.G.H.G.
15.999.57.0At4g26950828802unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
15.999.54.5At2g17860816296pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVO.I.C.G.H.G.
15.899.57.6At1g59780842271disease resistance protein (CC-NBS-LRR class), putativeF:ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFAO.I.C.G.H.G.
15.899.55.4At1g212903766772transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
15.799.5442.9At4g32940829431GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.O.I.C.G.H.G.
15.599.550.9At5g38710833862proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putativeF:proline dehydrogenase activity;P:proline catabolic process, glutamate biosynthetic process;C:unknown;BOMFPVAO.I.C.G.H.G.
15.599.545.1At1g56650842120PAP1 (PRODUCTION OF ANTHOCYANIN PIGMENT 1)Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene.O.I.C.G.H.G.
15.599.54.6At4g30540829177glutamine amidotransferase class-I domain-containing proteinF:catalytic activity;P:unknown;C:cellular_component unknown;OBAFPVMO.I.C.G.H.G.
15.499.510.9At3g25990822196DNA-binding protein GT-1-relatedF:transcription factor activity;P:regulation of transcription;C:unknown;PMO.I.C.G.H.G.
15.299.49.3At1g61610842457S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
15.199.424.8At3g57540824921remorin family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
14.899.44.5At4g03480827906protein bindingF:protein binding;P:biological_process unknown;C:unknown;MOPFBVAO.I.C.G.H.G.
14.799.46.4At5g39380833934calmodulin-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFBVO.I.C.G.H.G.
14.499.4247.6At1g73600843694methyltransferase/ phosphoethanolamine N-methyltransferaseF:methyltransferase activity, phosphoethanolamine N-methyltransferase activity;P:metabolic process;C:unknown;BOFAPMVO.I.C.G.H.G.
14.499.46.9At5g07380830629unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO.I.C.G.H.G.
14.399.46.1At1g05370837038-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FPMOO.I.C.G.H.G.
14.399.44.7At4g05570825911transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
14.299.414.2At5g14960831348DEL2 (DP-E2F-LIKE 2)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFO.I.C.G.H.G.
14.199.4313.1At3g16470820895JR1JA-responsive geneO.I.C.G.H.G.
13.899.45.4At3g09620820119DEAD/DEAH box helicase, putativeF:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
13.699.445.1At2g38790818461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
13.599.447.3At2g31110817667unknown proteinF:unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
13.499.419.3At1g54210841861ATG12A (AUTOPHAGY 12 A)F:protein binding;P:autophagy, protein ubiquitination during ubiquitin-dependent protein catabolic process, autophagic vacuole formation;C:cytoplasm;MFPOO.I.C.G.H.G.
13.499.44.3At2g26620817203glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.H.G.
13.199.4174.2At4g29190829040zinc finger (CCCH-type) family proteinF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;POMFO.I.C.G.H.G.
13.099.446.7At2g28720817421histone H2B, putativeF:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;MOPFBO.I.C.G.H.G.
13.099.425.2At3g10450820209SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOO.I.C.G.H.G.



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