CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-TABM-19-raw-cel-489756915

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
42.3 99.8 62.2 At5g59330 836052 lipid binding F:lipid binding;P:lipid transport;C:endomembrane system O.I. C.G. H.G.
37.7 99.7 321.4 At4g22490 828344 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
27.7 99.7 14.0 At3g27920 822415 ATMYB0 (MYB DOMAIN PROTEIN 0) Encodes a Myb-like protein that is required for induction of trichome development. O.I. C.G. H.G.
27.4 99.7 98.2 At4g37750 829931 ANT (AINTEGUMENTA) ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia. O.I. C.G. H.G.
25.5 99.7 33.8 At5g64110 836532 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:membrane;PFOB O.I. C.G. H.G.
23.2 99.6 350.3 At4g29030 829024 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA O.I. C.G. H.G.
22.4 99.6 19.8 At1g68640 843194 PAN (PERIANTHIA) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. O.I. C.G. H.G.
21.5 99.6 71.9 At5g10140 830878 FLC (FLOWERING LOCUS C) MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3� to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex. O.I. C.G. H.G.
20.9 99.6 41.3 At1g28710 839771 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
20.3 99.6 12.2 At4g31805 829309 WRKY family transcription factor F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:unknown;PMOB O.I. C.G. H.G.
19.3 99.6 39.3 At4g02850 828160 phenazine biosynthesis PhzC/PhzF family protein F:catalytic activity;P:biosynthetic process;C:endomembrane system;BOMFPA O.I. C.G. H.G.
18.7 99.5 18.8 At3g29590 822623 AT5MAT At3g29590 (At5MAT) encodes a malonyl-CoA:anthocyanidin 5-O-glucoside-6"-O-malonyltransferase that is coordinately expressed with a epistatic 5-O-anthocyanidin glucosyltransferase (At4g14090). The enzyme is involved in the malonylation of anthocyanins in Arabidopsis. O.I. C.G. H.G.
18.2 99.5 33.0 At1g11600 837704 CYP77B1 member of CYP77B O.I. C.G. H.G.
17.9 99.5 66.2 At1g57820 842157 VIM1 (VARIANT IN METHYLATION 1) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts. O.I. C.G. H.G.
17.5 99.5 92.8 At5g10400 830904 histone H3 F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPO O.I. C.G. H.G.
16.6 99.5 30.0 At1g78430 844179 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
16.6 99.5 16.1 At1g72670 843599 iqd8 (IQ-domain 8) F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMFO O.I. C.G. H.G.
16.1 99.5 27.3 At1g29270 839801 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
15.9 99.5 23.5 At3g12170 820394 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
15.7 99.5 26.5 At1g06100 837119 fatty acid desaturase family protein F:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPV O.I. C.G. H.G.
15.7 99.5 13.9 At5g53210 835402 SPCH (SPEECHLESS) Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6. O.I. C.G. H.G.
15.3 99.4 21.7 At1g74890 843828 ARR15 (RESPONSE REGULATOR 15) Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment. O.I. C.G. H.G.
15.1 99.4 94.6 At5g22880 832352 HTB2 Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases. O.I. C.G. H.G.
14.9 99.4 101.9 At1g07370 837249 PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation. O.I. C.G. H.G.
14.7 99.4 49.6 At4g28310 828946 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
14.6 99.4 62.0 At5g38930 833885 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:cell wall;PFO O.I. C.G. H.G.
14.6 99.4 12.5 At4g21270 827876 ATK1 (ARABIDOPSIS THALIANA KINESIN 1) Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis. O.I. C.G. H.G.
14.5 99.4 11.5 At4g17240 827436 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBF O.I. C.G. H.G.
14.2 99.4 33.2 At5g50740 835146 metal ion binding F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POMBFV O.I. C.G. H.G.
13.9 99.4 65.4 At2g43800 818984 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MPFOBVA O.I. C.G. H.G.
13.9 99.4 26.1 At5g62710 836392 leucine-rich repeat family protein / protein kinase family protein F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
13.8 99.4 17.1 At3g63300 825505 phosphoinositide binding F:phosphoinositide binding;P:signal transduction;C:unknown;OMPBF O.I. C.G. H.G.
13.6 99.4 38.0 At2g22840 816815 AtGRF1 (GROWTH-REGULATING FACTOR 1) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower O.I. C.G. H.G.
13.5 99.4 18.1 At5g66940 836828 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO O.I. C.G. H.G.
13.3 99.4 67.9 At1g65370 842848 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
13.3 99.4 49.2 At4g39510 830105 CYP96A12 member of CYP96A O.I. C.G. H.G.
13.1 99.4 82.1 At2g29570 817506 PCNA2 (PROLIFERATING CELL NUCLEAR ANTIGEN 2) Functionally interacts with POLH to repair DNA damaged by UVB damage. O.I. C.G. H.G.
13.0 99.4 152.5 At5g07030 830594 aspartic-type endopeptidase F:aspartic-type endopeptidase activity;P:proteolysis;C:cell wall, plant-type cell wall;PMFO O.I. C.G. H.G.
12.9 99.3 13.7 At3g30340 822735 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;OBPAM O.I. C.G. H.G.
12.8 99.3 71.8 At1g02730 839467 ATCSLD5 Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems. O.I. C.G. H.G.
12.8 99.3 23.8 At3g57780 824947 - F:unknown;P:unknown;C:unknown;OMFBPVA O.I. C.G. H.G.
12.6 99.3 20.6 At3g18524 821383 MSH2 (MUTS HOMOLOG 2) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7. O.I. C.G. H.G.
12.6 99.3 15.7 At4g14200 827060 unknown protein F:unknown;P:biological_process unknown;C:unknown;MBOFPA O.I. C.G. H.G.
12.6 99.3 4.8 At5g46830 834727 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFMO O.I. C.G. H.G.
12.5 99.3 50.6 At4g15830 827264 binding F:binding;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
12.5 99.3 49.5 At4g34160 829564 CYCD3 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. O.I. C.G. H.G.
12.5 99.3 25.4 At2g34190 817980 xanthine/uracil permease family protein F:transmembrane transporter activity;P:transport;C:membrane;BOMPFAV O.I. C.G. H.G.
12.5 99.3 18.5 At3g05470 819712 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:endomembrane system;MPOFVBA O.I. C.G. H.G.
12.1 99.3 71.0 At5g28640 832968 AN3 (ANGUSTIFOLIA 3) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors. O.I. C.G. H.G.
12.1 99.3 41.0 At2g36570 818230 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
11.9 99.3 275.4 At2g28790 817428 osmotin-like protein, putative F:molecular_function unknown;P:response to other organism;C:plant-type cell wall;PFMBO O.I. C.G. H.G.
11.9 99.3 29.6 At5g43020 834317 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
11.9 99.3 24.9 At4g28950 829016 ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) A member of ROP GTPase gene family. O.I. C.G. H.G.
11.9 99.3 20.9 At4g00480 827965 myc-related transcription factor (MYC1) MYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus O.I. C.G. H.G.
11.8 99.3 24.4 At1g67630 843086 POLA2 (DNA POLYMERASE ALPHA 2) F:DNA binding, DNA-directed DNA polymerase activity;P:DNA replication;C:mitochondrion;MFOP O.I. C.G. H.G.
11.8 99.3 23.9 At3g13175 820507 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
11.8 99.3 17.8 At5g43080 834324 CYCA3 F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFV O.I. C.G. H.G.
11.7 99.3 78.3 At4g33260 829462 CDC20.2 putative cdc20 protein (CDC20.2) O.I. C.G. H.G.
11.7 99.3 40.0 At5g48360 834889 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MPOFVBA O.I. C.G. H.G.
11.6 99.3 178.3 At1g62500 842547 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;MBPOFVA O.I. C.G. H.G.
11.6 99.3 26.7 At5g08020 830696 RPA70B (RPA70-KDA SUBUNIT B) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. O.I. C.G. H.G.
11.6 99.3 21.2 At2g29890 817539 VLN1 (VILLIN-LIKE 1) Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization. O.I. C.G. H.G.
11.5 99.3 19.7 At3g06030 819774 ANP3 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 3) NPK1-related protein kinase 3 O.I. C.G. H.G.
11.4 99.3 53.0 At2g45190 819127 AFO (ABNORMAL FLORAL ORGANS) Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS). O.I. C.G. H.G.
11.4 99.3 36.3 At3g17680 821035 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF O.I. C.G. H.G.
11.4 99.3 21.2 At5g23420 832408 HMGB6 Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain. O.I. C.G. H.G.
11.3 99.3 21.9 At4g02800 828171 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFBPVA O.I. C.G. H.G.
11.2 99.2 37.1 At1g66250 842942 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PFO O.I. C.G. H.G.
11.0 99.2 33.0 At3g14890 820718 phosphoesterase F:DNA binding, catalytic activity, zinc ion binding;P:unknown;C:unknown;MOFPVBA O.I. C.G. H.G.
11.0 99.2 28.3 At4g32980 829435 ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM. O.I. C.G. H.G.
10.9 99.2 49.5 At1g62560 842553 FMO GS-OX3 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 3) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates O.I. C.G. H.G.
10.9 99.2 26.4 At4g29360 829057 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, anchored to membrane;PFOB O.I. C.G. H.G.
10.8 99.2 183.1 At3g20670 821614 HTA13 Encodes HTA13, a histone H2A protein. O.I. C.G. H.G.
10.8 99.2 44.6 At5g44730 834502 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:endomembrane system;BMAOFP O.I. C.G. H.G.
10.6 99.2 77.6 At4g23800 828480 high mobility group (HMG1/2) family protein F:transcription factor activity;P:unknown;C:nucleus, chloroplast;MOBFPAV O.I. C.G. H.G.
10.6 99.2 61.8 At5g63530 836472 ATFP3 Farnesylated protein that binds metals. O.I. C.G. H.G.
10.6 99.2 32.8 At5g56740 835775 HAG2 (HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 2) Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of lysine 12 of histone H4 reduces radioactive acetylation by HAG2. HAG2 acetylates histone H4 lysine 12. O.I. C.G. H.G.
10.6 99.2 24.4 At5g66750 836808 CHR1 (CHROMATIN REMODELING 1) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation. O.I. C.G. H.G.
10.6 99.2 13.4 At5g63920 836513 DNA topoisomerase III alpha, putative F:DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding;P:DNA topological change, DNA unwinding during replication, DNA metabolic process;C:chromosome;BOMPAFV O.I. C.G. H.G.
10.6 99.2 6.9 At4g03270 828000 CYCD6 F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:nucleus;MPOFV O.I. C.G. H.G.
10.5 99.2 75.4 At3g61310 825303 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
10.5 99.2 49.8 At4g02060 828153 PRL (PROLIFERA) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. O.I. C.G. H.G.
10.5 99.2 31.1 At2g26180 817158 IQD6 (IQ-domain 6) F:calmodulin binding;P:unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
10.5 99.2 25.5 At5g57410 835847 unknown protein F:unknown;P:response to cadmium ion;C:unknown;MOFBPAV O.I. C.G. H.G.
10.5 99.2 23.3 At1g77630 844098 peptidoglycan-binding LysM domain-containing protein F:unknown;P:cell wall macromolecule catabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PBOMF O.I. C.G. H.G.
10.5 99.2 20.6 At3g01410 821319 RNase H domain-containing protein F:ribonuclease H activity, nuclease activity, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;POBAM O.I. C.G. H.G.
10.5 99.2 17.8 At3g57830 824952 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
10.5 99.2 9.2 At3g52540 824420 OFP18 (OVATE FAMILY PROTEIN 18) F:unknown;P:biological_process unknown;C:chloroplast;MPOF O.I. C.G. H.G.
10.4 99.2 87.7 At4g38660 830022 thaumatin, putative F:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOV O.I. C.G. H.G.
10.4 99.2 31.3 At4g14770 827132 TCX2 (TESMIN/TSO1-LIKE CXC 2) F:transcription factor activity;P:regulation of transcription;C:chloroplast;OMPFB O.I. C.G. H.G.
10.4 99.2 31.1 At3g25980 822195 mitotic spindle checkpoint protein, putative (MAD2) F:DNA binding;P:mitosis, mitotic cell cycle spindle assembly checkpoint;C:endomembrane system;MFOP O.I. C.G. H.G.
10.4 99.2 27.3 At1g18370 838418 HIK (HINKEL) Mutant has cytokinesis defects; seedling lethal O.I. C.G. H.G.
10.4 99.2 14.7 At5g55340 835627 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF O.I. C.G. H.G.
10.3 99.2 99.0 At3g53190 824485 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFO O.I. C.G. H.G.
10.3 99.2 37.5 At5g46280 834670 DNA replication licensing factor, putative F:nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication initiation, DNA replication;C:nucleus;MOFPABV O.I. C.G. H.G.
10.3 99.2 32.3 At1g02690 839517 IMPA-6 (IMPORTIN ALPHA ISOFORM 6) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. O.I. C.G. H.G.
10.3 99.2 17.4 At3g61610 825334 aldose 1-epimerase family protein F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process;C:cellular_component unknown;BOPFM O.I. C.G. H.G.
10.2 99.2 45.5 At5g65410 836666 HB25 (HOMEOBOX PROTEIN 25) Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family. O.I. C.G. H.G.
10.2 99.2 21.9 At5g62410 836362 SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) SMC2-1 (SMC2) O.I. C.G. H.G.
10.1 99.2 32.9 At5g25090 832580 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
42.3	99.8	62.2	At5g59330	836052	lipid binding	F:lipid binding;P:lipid transport;C:endomembrane system	O.I.	C.G.	H.G.
37.7	99.7	321.4	At4g22490	828344	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
27.7	99.7	14.0	At3g27920	822415	ATMYB0 (MYB DOMAIN PROTEIN 0)	Encodes a Myb-like protein that is required for induction of trichome development.	O.I.	C.G.	H.G.
27.4	99.7	98.2	At4g37750	829931	ANT (AINTEGUMENTA)	ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.	O.I.	C.G.	H.G.
25.5	99.7	33.8	At5g64110	836532	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:membrane;PFOB	O.I.	C.G.	H.G.
23.2	99.6	350.3	At4g29030	829024	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA	O.I.	C.G.	H.G.
22.4	99.6	19.8	At1g68640	843194	PAN (PERIANTHIA)	Encodes bZIP-transcription factor. Mutant plants have extra floral organs.	O.I.	C.G.	H.G.
21.5	99.6	71.9	At5g10140	830878	FLC (FLOWERING LOCUS C)	MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3� to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.	O.I.	C.G.	H.G.
20.9	99.6	41.3	At1g28710	839771	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
20.3	99.6	12.2	At4g31805	829309	WRKY family transcription factor	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:unknown;PMOB	O.I.	C.G.	H.G.
19.3	99.6	39.3	At4g02850	828160	phenazine biosynthesis PhzC/PhzF family protein	F:catalytic activity;P:biosynthetic process;C:endomembrane system;BOMFPA	O.I.	C.G.	H.G.
18.7	99.5	18.8	At3g29590	822623	AT5MAT	At3g29590 (At5MAT) encodes a malonyl-CoA:anthocyanidin 5-O-glucoside-6"-O-malonyltransferase that is coordinately expressed with a epistatic 5-O-anthocyanidin glucosyltransferase (At4g14090). The enzyme is involved in the malonylation of anthocyanins in Arabidopsis.	O.I.	C.G.	H.G.
18.2	99.5	33.0	At1g11600	837704	CYP77B1	member of CYP77B	O.I.	C.G.	H.G.
17.9	99.5	66.2	At1g57820	842157	VIM1 (VARIANT IN METHYLATION 1)	Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.	O.I.	C.G.	H.G.
17.5	99.5	92.8	At5g10400	830904	histone H3	F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPO	O.I.	C.G.	H.G.
16.6	99.5	30.0	At1g78430	844179	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
16.6	99.5	16.1	At1g72670	843599	iqd8 (IQ-domain 8)	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMFO	O.I.	C.G.	H.G.
16.1	99.5	27.3	At1g29270	839801	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
15.9	99.5	23.5	At3g12170	820394	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
15.7	99.5	26.5	At1g06100	837119	fatty acid desaturase family protein	F:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPV	O.I.	C.G.	H.G.
15.7	99.5	13.9	At5g53210	835402	SPCH (SPEECHLESS)	Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6.	O.I.	C.G.	H.G.
15.3	99.4	21.7	At1g74890	843828	ARR15 (RESPONSE REGULATOR 15)	Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment.	O.I.	C.G.	H.G.
15.1	99.4	94.6	At5g22880	832352	HTB2	Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.	O.I.	C.G.	H.G.
14.9	99.4	101.9	At1g07370	837249	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN)	Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.	O.I.	C.G.	H.G.
14.7	99.4	49.6	At4g28310	828946	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
14.6	99.4	62.0	At5g38930	833885	germin-like protein, putative	F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:cell wall;PFO	O.I.	C.G.	H.G.
14.6	99.4	12.5	At4g21270	827876	ATK1 (ARABIDOPSIS THALIANA KINESIN 1)	Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis.	O.I.	C.G.	H.G.
14.5	99.4	11.5	At4g17240	827436	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBF	O.I.	C.G.	H.G.
14.2	99.4	33.2	At5g50740	835146	metal ion binding	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POMBFV	O.I.	C.G.	H.G.
13.9	99.4	65.4	At2g43800	818984	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MPFOBVA	O.I.	C.G.	H.G.
13.9	99.4	26.1	At5g62710	836392	leucine-rich repeat family protein / protein kinase family protein	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
13.8	99.4	17.1	At3g63300	825505	phosphoinositide binding	F:phosphoinositide binding;P:signal transduction;C:unknown;OMPBF	O.I.	C.G.	H.G.
13.6	99.4	38.0	At2g22840	816815	AtGRF1 (GROWTH-REGULATING FACTOR 1)	Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower	O.I.	C.G.	H.G.
13.5	99.4	18.1	At5g66940	836828	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO	O.I.	C.G.	H.G.
13.3	99.4	67.9	At1g65370	842848	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
13.3	99.4	49.2	At4g39510	830105	CYP96A12	member of CYP96A	O.I.	C.G.	H.G.
13.1	99.4	82.1	At2g29570	817506	PCNA2 (PROLIFERATING CELL NUCLEAR ANTIGEN 2)	Functionally interacts with POLH to repair DNA damaged by UVB damage.	O.I.	C.G.	H.G.
13.0	99.4	152.5	At5g07030	830594	aspartic-type endopeptidase	F:aspartic-type endopeptidase activity;P:proteolysis;C:cell wall, plant-type cell wall;PMFO	O.I.	C.G.	H.G.
12.9	99.3	13.7	At3g30340	822735	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;OBPAM	O.I.	C.G.	H.G.
12.8	99.3	71.8	At1g02730	839467	ATCSLD5	Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.	O.I.	C.G.	H.G.
12.8	99.3	23.8	At3g57780	824947	-	F:unknown;P:unknown;C:unknown;OMFBPVA	O.I.	C.G.	H.G.
12.6	99.3	20.6	At3g18524	821383	MSH2 (MUTS HOMOLOG 2)	Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.	O.I.	C.G.	H.G.
12.6	99.3	15.7	At4g14200	827060	unknown protein	F:unknown;P:biological_process unknown;C:unknown;MBOFPA	O.I.	C.G.	H.G.
12.6	99.3	4.8	At5g46830	834727	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFMO	O.I.	C.G.	H.G.
12.5	99.3	50.6	At4g15830	827264	binding	F:binding;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
12.5	99.3	49.5	At4g34160	829564	CYCD3	encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.	O.I.	C.G.	H.G.
12.5	99.3	25.4	At2g34190	817980	xanthine/uracil permease family protein	F:transmembrane transporter activity;P:transport;C:membrane;BOMPFAV	O.I.	C.G.	H.G.
12.5	99.3	18.5	At3g05470	819712	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:endomembrane system;MPOFVBA	O.I.	C.G.	H.G.
12.1	99.3	71.0	At5g28640	832968	AN3 (ANGUSTIFOLIA 3)	Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.	O.I.	C.G.	H.G.
12.1	99.3	41.0	At2g36570	818230	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
11.9	99.3	275.4	At2g28790	817428	osmotin-like protein, putative	F:molecular_function unknown;P:response to other organism;C:plant-type cell wall;PFMBO	O.I.	C.G.	H.G.
11.9	99.3	29.6	At5g43020	834317	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
11.9	99.3	24.9	At4g28950	829016	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)	A member of ROP GTPase gene family.	O.I.	C.G.	H.G.
11.9	99.3	20.9	At4g00480	827965	myc-related transcription factor (MYC1)	MYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus	O.I.	C.G.	H.G.
11.8	99.3	24.4	At1g67630	843086	POLA2 (DNA POLYMERASE ALPHA 2)	F:DNA binding, DNA-directed DNA polymerase activity;P:DNA replication;C:mitochondrion;MFOP	O.I.	C.G.	H.G.
11.8	99.3	23.9	At3g13175	820507	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
11.8	99.3	17.8	At5g43080	834324	CYCA3	F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFV	O.I.	C.G.	H.G.
11.7	99.3	78.3	At4g33260	829462	CDC20.2	putative cdc20 protein (CDC20.2)	O.I.	C.G.	H.G.
11.7	99.3	40.0	At5g48360	834889	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MPOFVBA	O.I.	C.G.	H.G.
11.6	99.3	178.3	At1g62500	842547	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;MBPOFVA	O.I.	C.G.	H.G.
11.6	99.3	26.7	At5g08020	830696	RPA70B (RPA70-KDA SUBUNIT B)	Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.	O.I.	C.G.	H.G.
11.6	99.3	21.2	At2g29890	817539	VLN1 (VILLIN-LIKE 1)	Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization.	O.I.	C.G.	H.G.
11.5	99.3	19.7	At3g06030	819774	ANP3 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 3)	NPK1-related protein kinase 3	O.I.	C.G.	H.G.
11.4	99.3	53.0	At2g45190	819127	AFO (ABNORMAL FLORAL ORGANS)	Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).	O.I.	C.G.	H.G.
11.4	99.3	36.3	At3g17680	821035	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF	O.I.	C.G.	H.G.
11.4	99.3	21.2	At5g23420	832408	HMGB6	Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.	O.I.	C.G.	H.G.
11.3	99.3	21.9	At4g02800	828171	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFBPVA	O.I.	C.G.	H.G.
11.2	99.2	37.1	At1g66250	842942	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PFO	O.I.	C.G.	H.G.
11.0	99.2	33.0	At3g14890	820718	phosphoesterase	F:DNA binding, catalytic activity, zinc ion binding;P:unknown;C:unknown;MOFPVBA	O.I.	C.G.	H.G.
11.0	99.2	28.3	At4g32980	829435	ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1)	Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.	O.I.	C.G.	H.G.
10.9	99.2	49.5	At1g62560	842553	FMO GS-OX3 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 3)	belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates	O.I.	C.G.	H.G.
10.9	99.2	26.4	At4g29360	829057	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, anchored to membrane;PFOB	O.I.	C.G.	H.G.
10.8	99.2	183.1	At3g20670	821614	HTA13	Encodes HTA13, a histone H2A protein.	O.I.	C.G.	H.G.
10.8	99.2	44.6	At5g44730	834502	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:endomembrane system;BMAOFP	O.I.	C.G.	H.G.
10.6	99.2	77.6	At4g23800	828480	high mobility group (HMG1/2) family protein	F:transcription factor activity;P:unknown;C:nucleus, chloroplast;MOBFPAV	O.I.	C.G.	H.G.
10.6	99.2	61.8	At5g63530	836472	ATFP3	Farnesylated protein that binds metals.	O.I.	C.G.	H.G.
10.6	99.2	32.8	At5g56740	835775	HAG2 (HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 2)	Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of lysine 12 of histone H4 reduces radioactive acetylation by HAG2. HAG2 acetylates histone H4 lysine 12.	O.I.	C.G.	H.G.
10.6	99.2	24.4	At5g66750	836808	CHR1 (CHROMATIN REMODELING 1)	Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.	O.I.	C.G.	H.G.
10.6	99.2	13.4	At5g63920	836513	DNA topoisomerase III alpha, putative	F:DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding;P:DNA topological change, DNA unwinding during replication, DNA metabolic process;C:chromosome;BOMPAFV	O.I.	C.G.	H.G.
10.6	99.2	6.9	At4g03270	828000	CYCD6	F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:nucleus;MPOFV	O.I.	C.G.	H.G.
10.5	99.2	75.4	At3g61310	825303	DNA-binding family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
10.5	99.2	49.8	At4g02060	828153	PRL (PROLIFERA)	Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.	O.I.	C.G.	H.G.
10.5	99.2	31.1	At2g26180	817158	IQD6 (IQ-domain 6)	F:calmodulin binding;P:unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
10.5	99.2	25.5	At5g57410	835847	unknown protein	F:unknown;P:response to cadmium ion;C:unknown;MOFBPAV	O.I.	C.G.	H.G.
10.5	99.2	23.3	At1g77630	844098	peptidoglycan-binding LysM domain-containing protein	F:unknown;P:cell wall macromolecule catabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PBOMF	O.I.	C.G.	H.G.
10.5	99.2	20.6	At3g01410	821319	RNase H domain-containing protein	F:ribonuclease H activity, nuclease activity, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;POBAM	O.I.	C.G.	H.G.
10.5	99.2	17.8	At3g57830	824952	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
10.5	99.2	9.2	At3g52540	824420	OFP18 (OVATE FAMILY PROTEIN 18)	F:unknown;P:biological_process unknown;C:chloroplast;MPOF	O.I.	C.G.	H.G.
10.4	99.2	87.7	At4g38660	830022	thaumatin, putative	F:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOV	O.I.	C.G.	H.G.
10.4	99.2	31.3	At4g14770	827132	TCX2 (TESMIN/TSO1-LIKE CXC 2)	F:transcription factor activity;P:regulation of transcription;C:chloroplast;OMPFB	O.I.	C.G.	H.G.
10.4	99.2	31.1	At3g25980	822195	mitotic spindle checkpoint protein, putative (MAD2)	F:DNA binding;P:mitosis, mitotic cell cycle spindle assembly checkpoint;C:endomembrane system;MFOP	O.I.	C.G.	H.G.
10.4	99.2	27.3	At1g18370	838418	HIK (HINKEL)	Mutant has cytokinesis defects; seedling lethal	O.I.	C.G.	H.G.
10.4	99.2	14.7	At5g55340	835627	long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein	F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF	O.I.	C.G.	H.G.
10.3	99.2	99.0	At3g53190	824485	pectate lyase family protein	F:lyase activity, pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFO	O.I.	C.G.	H.G.
10.3	99.2	37.5	At5g46280	834670	DNA replication licensing factor, putative	F:nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication initiation, DNA replication;C:nucleus;MOFPABV	O.I.	C.G.	H.G.
10.3	99.2	32.3	At1g02690	839517	IMPA-6 (IMPORTIN ALPHA ISOFORM 6)	Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	O.I.	C.G.	H.G.
10.3	99.2	17.4	At3g61610	825334	aldose 1-epimerase family protein	F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process;C:cellular_component unknown;BOPFM	O.I.	C.G.	H.G.
10.2	99.2	45.5	At5g65410	836666	HB25 (HOMEOBOX PROTEIN 25)	Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.	O.I.	C.G.	H.G.
10.2	99.2	21.9	At5g62410	836362	SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2)	SMC2-1 (SMC2)	O.I.	C.G.	H.G.
10.1	99.2	32.9	At5g25090	832580	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;P	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-TABM-19-raw-cel-489756915
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-TABM-19-raw-cel-489756915 GSE experiment -

GSM ID -

Assay name E-TABM-19-raw-cel-489756915

GSE experiment -