CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-TABM-18-raw-cel-489542823

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
69.0 99.9 34.3 At5g30450 3770959 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
13.9 99.4 38.2 At4g30610 829184 BRS1 (BRI1 SUPPRESSOR 1) Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease. O.I. C.G. H.G.
13.1 99.4 36.2 At5g64050 836526 ERS (GLUTAMATE TRNA SYNTHETASE) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. O.I. C.G. H.G.
12.6 99.3 21.3 At3g63510 825526 FAD binding / catalytic/ tRNA dihydrouridine synthase F:tRNA dihydrouridine synthase activity, FAD binding, catalytic activity;P:regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
11.3 99.3 54.4 At3g01440 821143 oxygen evolving enhancer 3 (PsbQ) family protein F:calcium ion binding;P:photosynthesis, light reaction;C:chloroplast thylakoid membrane, chloroplast photosystem II, chloroplast thylakoid lumen, chloroplast, oxygen evolving complex;P O.I. C.G. H.G.
10.6 99.2 54.3 At3g15520 820791 peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamase F:peptidyl-prolyl cis-trans isomerase activity;P:unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BOPA O.I. C.G. H.G.
10.2 99.2 80.8 At1g16080 838178 unknown protein F:unknown;P:unknown;C:apoplast, chloroplast stroma, chloroplast, chloroplast envelope;POB O.I. C.G. H.G.
10.2 99.2 37.4 At4g12830 826895 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:chloroplast;BOMPFA O.I. C.G. H.G.
9.8 99.1 144.3 At5g51720 835246 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;MPO O.I. C.G. H.G.
9.4 99.1 108.1 At1g14345 837996 oxidoreductase F:oxidoreductase activity;P:oxidation reduction;C:chloroplast thylakoid membrane, chloroplast, membrane;OBP O.I. C.G. H.G.
8.9 99.0 5.9 At2g04820 3768606 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
8.8 99.0 94.4 At1g72030 843534 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:unknown;PBO O.I. C.G. H.G.
8.8 99.0 68.2 At5g37260 833700 RVE2 (REVEILLE 2) Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis. O.I. C.G. H.G.
8.8 99.0 7.5 At3g61920 825365 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
8.7 99.0 80.6 At5g17310 831596 UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative F:UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity;P:response to cadmium ion, response to salt stress, metabolic process;C:plasma membrane;MBFPO O.I. C.G. H.G.
8.6 99.0 45.1 At3g53130 824479 LUT1 (LUTEIN DEFICIENT 1) Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. Maps at 67.3 cM on chromosome 3. O.I. C.G. H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage