Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-TABM-126-raw-cel-1242542681
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
244.4100.062.0At1g66860843004hydrolaseF:hydrolase activity;P:glutamine metabolic process, N-terminal protein myristoylation;C:cellular_component unknown;BOPAFO.I.C.G.H.G.
59.499.8145.3At2g34600818025JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7)F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;PO.I.C.G.H.G.
48.499.8155.8At5g13220831162JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa.O.I.C.G.H.G.
37.799.750.5At1g75230843860HhH-GPD base excision DNA repair family proteinF:catalytic activity;P:DNA repair, base-excision repair;C:nucleus;OBFPAMO.I.C.G.H.G.
33.199.723.6At5g381208337924-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinF:4-coumarate-CoA ligase activity;P:metabolic process;C:unknown;BOFMPAVO.I.C.G.H.G.
31.699.724.1At5g52120835288AtPP2-A14 (Phloem protein 2-A14)F:carbohydrate binding;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
29.299.7124.4At1g17620838339-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
22.899.6139.9At5g06870830578PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2)Encodes a polygalacturonase inhibiting protein involved in plant defense response. PGIPs inhibit the activity of pectin degrading enzymes such as those produced by fungal pathogens. PGIP2 is induced by fungal infection and methyl jasmonate.O.I.C.G.H.G.
22.499.6158.4At1g70700843407TIFY7JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.O.I.C.G.H.G.
20.499.663.2At4g24350828538phosphorylase family proteinF:catalytic activity, nutrient reservoir activity;P:response to wounding;C:plant-type cell wall;BPOAFO.I.C.G.H.G.
20.399.6178.0At1g72450843577JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)JAZ6 transcript levels rise in response to a jasmonate stimulus and a GFP:JAZ6 fusion protein localizes to the nucleus. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ6:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation.O.I.C.G.H.G.
20.399.6138.5At5g47240834771atnudt8 (Arabidopsis thaliana Nudix hydrolase homolog 8)F:hydrolase activity;P:response to wounding;C:cytosol;BOMPAFVO.I.C.G.H.G.
19.699.6154.0At5g13200831159GRAM domain-containing protein / ABA-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
18.499.564.1At2g25200817058unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
18.099.5261.1At2g15130816001plant basic secretory protein (BSP) family proteinF:molecular_function unknown;P:defense response;C:endomembrane system;PFBOO.I.C.G.H.G.
17.999.565.0At1g36280840534adenylosuccinate lyase, putative / adenylosuccinase, putativeF:N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, catalytic activity;P:purine ribonucleotide biosynthetic process, purine base biosynthetic process, IMP biosynthetic process;C:chloroplast;BOMFAPO.I.C.G.H.G.
17.699.522.9At1g18710838453AtMYB47 (myb domain protein 47)Member of the R2R3 factor gene family.O.I.C.G.H.G.
16.499.549.4At2g38790818461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
16.399.5103.0At1g44350841026ILL6encodes a protein similar to IAA amino acid conjugate hydrolase.O.I.C.G.H.G.
16.299.536.2At1g74430843784MYB95 (myb domain protein 95)Encodes a putative transcription factor (MYB95).O.I.C.G.H.G.
15.499.532.3At5g19100832030extracellular dermal glycoprotein-related / EDGP-relatedF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PO.I.C.G.H.G.
15.299.426.1At5g52320835308CYP96A4member of CYP96AO.I.C.G.H.G.
15.099.449.4At2g04066814942MATE efflux protein-relatedF:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;PBOFMO.I.C.G.H.G.
14.899.47.8At3g28890822523AtRLP43 (Receptor Like Protein 43)F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
14.499.471.0At2g38750818457ANNAT4 (ANNEXIN ARABIDOPSIS 4)Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis.O.I.C.G.H.G.
14.499.467.3At1g30135839893JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
14.499.455.2At5g27520832812PNC2 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 2)encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.O.I.C.G.H.G.
14.399.4110.1At3g19680821505unknown proteinF:unknown;P:unknown;C:plasma membrane;OPMBFO.I.C.G.H.G.
14.299.429.0At4g11000826701ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAO.I.C.G.H.G.
13.899.431.3At1g50040841428unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBVO.I.C.G.H.G.
12.999.3137.8At1g74950843834TIFY10BF:molecular_function unknown;P:response to jasmonic acid stimulus, response to wounding;C:cellular_component unknown;PO.I.C.G.H.G.
12.599.377.6At2g27690817315CYP94C1Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.O.I.C.G.H.G.
11.899.346.0At1g23850838996unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.799.319.0At3g57770824946protein kinase, putativeF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVAO.I.C.G.H.G.
11.699.346.6At4g37240829878unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.C.G.H.G.
11.599.3192.1At2g32150817774haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFAMO.I.C.G.H.G.
11.499.319.1At5g25180832589CYP71B14putative cytochrome P450O.I.C.G.H.G.
11.399.39.3At3g01080821213WRKY58member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
11.299.2124.4At3g44860823620FAMT (farnesoic acid carboxyl-O-methyltransferase)Encodes a farnesoic acid carboxyl-O-methyltransferase.O.I.C.G.H.G.
11.299.231.9At1g50460841468HKL1 (HEXOKINASE-LIKE 1)F:hexokinase activity, fructokinase activity, glucokinase activity, ATP binding;P:response to salt stress, response to cold, response to osmotic stress;C:mitochondrion, plastid;MFPOBO.I.C.G.H.G.
10.799.29.4At1g09950837529transcription factor-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
10.499.2122.5At3g48640824024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
10.399.246.3At1g31550840045GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBFOMO.I.C.G.H.G.
10.299.279.9At2g39420818527esterase/lipase/thioesterase family proteinF:catalytic activity;P:unknown;C:unknown;BOPMFVAO.I.C.G.H.G.
10.199.269.7At1g17380838310JAZ5 (JASMONATE-ZIM-DOMAIN PROTEIN 5)F:molecular_function unknown;P:response to jasmonic acid stimulus;C:cellular_component unknown;PO.I.C.G.H.G.
10.099.260.8At1g53885841826senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.999.196.7At5g57550835859XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)xyloglucan endotransglycosylase-related protein (XTR3)O.I.C.G.H.G.
9.599.190.1At5g08330830730TCP family transcription factor, putativeF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PMOBO.I.C.G.H.G.
9.599.177.4At3g56200824786amino acid transporter family proteinEncodes a putative amino acid transporter.O.I.C.G.H.G.
9.299.186.3At3g51450824308strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAFO.I.C.G.H.G.
9.199.1337.6At5g57560835860TCH4 (Touch 4)Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuliO.I.C.G.H.G.
9.199.178.0At1g51760841602IAR3 (IAA-ALANINE RESISTANT 3)encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.O.I.C.G.H.G.
9.199.12.5At5g59580836077UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1)F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity;P:metabolic process;C:unknown;PMBVOFO.I.C.G.H.G.
8.899.080.5At1g32640840158MYC2Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue light–mediated photomorphogenic growth and blue and far-red-light–regulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression.O.I.C.G.H.G.
8.899.080.5At4g03050828104AOP3Transcriptional silent in leaf tissues of ecotype Col. The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.O.I.C.G.H.G.



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