CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-98-raw-cel-320188804

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
313.5 100.0 388.6 At2g27690 817315 CYP94C1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. O.I. C.G. H.G.
280.8 100.0 120.6 At1g72790 843610 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;MPFOBVA O.I. C.G. H.G.
277.7 100.0 187.8 At4g08170 826367 inositol 1,3,4-trisphosphate 5/6-kinase family protein F:magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity;P:response to wounding;C:nucleus, cytoplasm;PMOB O.I. C.G. H.G.
221.1 100.0 205.9 At4g03400 827938 DFL2 (DWARF IN LIGHT 2) Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation. O.I. C.G. H.G.
188.3 100.0 169.1 At5g24030 832468 SLAH3 (SLAC1 HOMOLOGUE 3) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane. O.I. C.G. H.G.
174.4 100.0 55.3 At2g31010 817652 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVA O.I. C.G. H.G.
163.3 99.9 101.4 At4g21400 827892 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
145.0 99.9 196.0 At3g63380 825513 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV O.I. C.G. H.G.
128.2 99.9 56.2 At2g38250 818404 DNA-binding protein-related F:transcription factor activity;P:regulation of transcription;C:nucleolus;MOFPBV O.I. C.G. H.G.
127.6 99.9 76.7 At5g46330 834676 FLS2 (FLAGELLIN-SENSITIVE 2) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. O.I. C.G. H.G.
120.1 99.9 92.1 At4g32800 829416 AP2 domain-containing transcription factor TINY, putative encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. O.I. C.G. H.G.
111.1 99.9 151.1 At2g34930 818058 disease resistance family protein F:protein binding;P:signal transduction, defense response to fungus, defense response;C:cell wall;PMOBFAV O.I. C.G. H.G.
110.2 99.9 135.7 At5g38710 833862 proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative F:proline dehydrogenase activity;P:proline catabolic process, glutamate biosynthetic process;C:unknown;BOMFPVA O.I. C.G. H.G.
107.1 99.9 146.8 At4g38420 829999 sks9 (SKU5 Similar 9) F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOA O.I. C.G. H.G.
105.8 99.9 255.6 At1g15010 838066 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PB O.I. C.G. H.G.
105.7 99.9 178.1 At1g22570 838863 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPOMF O.I. C.G. H.G.
101.4 99.9 8.3 At5g59580 836077 UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity;P:metabolic process;C:unknown;PMBVOF O.I. C.G. H.G.
100.5 99.9 136.8 At1g02660 839544 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;MOFPBV O.I. C.G. H.G.
95.3 99.9 364.8 At1g35140 840399 PHI-1 (PHOSPHATE-INDUCED 1) At1g35140 (At1g35140/T32G9_32) mRNA, complete cds O.I. C.G. H.G.
94.9 99.9 111.5 At5g43170 834334 AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3) Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor. O.I. C.G. H.G.
91.9 99.9 203.0 At2g27500 817295 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, nucleus, cytoplasm;PFO O.I. C.G. H.G.
89.1 99.9 90.3 At1g50460 841468 HKL1 (HEXOKINASE-LIKE 1) F:hexokinase activity, fructokinase activity, glucokinase activity, ATP binding;P:response to salt stress, response to cold, response to osmotic stress;C:mitochondrion, plastid;MFPOB O.I. C.G. H.G.
85.5 99.9 97.1 At3g23590 821938 RFR1 (REF4-related 1) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
82.3 99.9 52.6 At3g05320 819696 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF O.I. C.G. H.G.
81.2 99.9 95.7 At3g62150 825388 PGP21 (P-GLYCOPROTEIN 21) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
81.1 99.9 117.1 At4g21410 827893 protein kinase family protein F:kinase activity;P:response to abscisic acid stimulus;C:plasma membrane, vacuole;MPOBFVA O.I. C.G. H.G.
78.7 99.9 370.6 At5g62360 836357 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
78.5 99.9 60.7 At1g75310 843868 AUL1 F:heat shock protein binding;P:protein folding;C:unknown;MOBFPVA O.I. C.G. H.G.
77.4 99.9 135.9 At1g11210 837662 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;PO O.I. C.G. H.G.
76.3 99.9 68.1 At1g14780 838043 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
75.9 99.9 263.4 At3g59350 825104 serine/threonine protein kinase, putative F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
72.7 99.9 39.5 At3g05660 819733 AtRLP33 (Receptor Like Protein 33) F:protein binding, kinase activity;P:signal transduction, defense response;C:chloroplast;PMOBFAV O.I. C.G. H.G.
72.4 99.9 205.3 At5g55050 835596 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
72.4 99.9 136.1 At5g54380 835526 THE1 (THESEUS1) F:protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
71.9 99.9 367.3 At2g38240 818403 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:response to salt stress;C:unknown;POBFM O.I. C.G. H.G.
70.1 99.9 54.7 At1g77640 844099 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
69.6 99.9 86.8 At3g58620 825031 TTL4 (Tetratricopetide-repeat Thioredoxin-Like 4) F:binding;P:cell redox homeostasis;C:cellular_component unknown;MBOFPAV O.I. C.G. H.G.
65.9 99.8 200.9 At4g36010 829757 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOV O.I. C.G. H.G.
65.4 99.8 54.0 At5g63450 836464 CYP94B1 member of CYP94B O.I. C.G. H.G.
64.8 99.8 102.4 At1g35350 840424 - F:unknown;P:unknown;C:integral to membrane;FMPOB O.I. C.G. H.G.
64.6 99.8 49.8 At1g27910 839684 PUB45 (PLANT U-BOX 45) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. O.I. C.G. H.G.
62.1 99.8 66.5 At1g50040 841428 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBV O.I. C.G. H.G.
59.9 99.8 76.4 At5g60860 836207 AtRABA1f (Arabidopsis Rab GTPase homolog A1f) F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBAV O.I. C.G. H.G.
59.5 99.8 187.9 At5g65630 836689 GTE7 (Global transcription factor group E 7) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation. O.I. C.G. H.G.
59.1 99.8 116.5 At5g52050 835280 MATE efflux protein-related F:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;BOPFAM O.I. C.G. H.G.
58.9 99.8 30.0 At5g26770 832735 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
58.7 99.8 32.9 At5g04020 830281 calmodulin binding F:calmodulin binding;P:biological_process unknown;C:plasma membrane;OMBPFAV O.I. C.G. H.G.
58.3 99.8 61.5 At1g76580 843991 transcription factor F:transcription factor activity;P:regulation of transcription;C:plasma membrane;OMFPB O.I. C.G. H.G.
57.4 99.8 54.5 At1g26730 839214 EXS family protein / ERD1/XPR1/SYG1 family protein F:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOB O.I. C.G. H.G.
56.7 99.8 71.2 At5g03200 831908 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;MOPVF O.I. C.G. H.G.
55.8 99.8 36.9 At1g63750 842679 ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding F:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVA O.I. C.G. H.G.
55.3 99.8 66.4 At3g16860 820941 COBL8 (COBRA-LIKE PROTEIN 8 PRECURSOR) F:unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
54.9 99.8 215.8 At3g19680 821505 unknown protein F:unknown;P:unknown;C:plasma membrane;OPMBF O.I. C.G. H.G.
54.9 99.8 69.4 At1g61667 842463 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
52.7 99.8 84.7 At1g53430 841778 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
52.2 99.8 155.3 At5g16910 831554 CSLD2 (CELLULOSE-SYNTHASE LIKE D2) encodes a gene similar to cellulose synthase. Located in golgi membranes. O.I. C.G. H.G.
51.9 99.8 53.1 At3g02140 821182 TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2) Encodes a protein that acts in the nucleus and is an important negative regulator of ABA and salt stress responses, and could play a critical role in controlling root elongation, floral initiation and starch degradation. O.I. C.G. H.G.
50.3 99.8 152.4 At2g44500 819057 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
49.9 99.8 155.2 At1g17380 838310 JAZ5 (JASMONATE-ZIM-DOMAIN PROTEIN 5) F:molecular_function unknown;P:response to jasmonic acid stimulus;C:cellular_component unknown;P O.I. C.G. H.G.
49.3 99.8 69.2 At1g78280 844163 transferase, transferring glycosyl groups F:transferase activity, transferring glycosyl groups;P:cell surface receptor linked signal transduction;C:cellular_component unknown;MBOFP O.I. C.G. H.G.
47.9 99.8 273.2 At1g72450 843577 JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6) JAZ6 transcript levels rise in response to a jasmonate stimulus and a GFP:JAZ6 fusion protein localizes to the nucleus. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ6:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. O.I. C.G. H.G.
47.6 99.8 137.8 At1g21910 838793 AP2 domain-containing transcription factor family protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
47.0 99.8 46.7 At2g42010 818802 PLDBETA1 (PHOSPHOLIPASE D BETA 1) phospholipase D (PLDbeta) O.I. C.G. H.G.
46.7 99.8 20.5 At4g00130 825649 - F:unknown;P:biological_process unknown;C:mitochondrion;PO O.I. C.G. H.G.
45.5 99.8 145.2 At1g57630 842139 disease resistance protein (TIR class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P O.I. C.G. H.G.
45.5 99.8 92.8 At1g21980 838801 ATPIP5K1 (PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution. O.I. C.G. H.G.
45.0 99.8 39.8 At1g30640 839944 protein kinase, putative F:protein kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVA O.I. C.G. H.G.
43.8 99.8 178.5 At3g62720 825446 XT1 (XYLOSYLTRANSFERASE 1) Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides. O.I. C.G. H.G.
43.7 99.8 135.6 At3g21230 821677 4CL5 (4-coumarate:CoA ligase 5) The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo. O.I. C.G. H.G.
42.2 99.8 222.1 At4g29670 829088 thioredoxin family protein Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase. O.I. C.G. H.G.
41.9 99.8 115.4 At1g02400 839508 GA2OX6 (GIBBERELLIN 2-OXIDASE 6) Encodes a gibberellin 2-oxidase. O.I. C.G. H.G.
41.9 99.8 62.6 At3g14205 820638 phosphoinositide phosphatase family protein F:phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
41.8 99.8 48.0 At5g23870 832452 pectinacetylesterase family protein F:carboxylesterase activity;P:biological_process unknown;C:plant-type cell wall;PMOB O.I. C.G. H.G.
41.4 99.8 104.4 At5g25440 832618 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:nucleus, cytoplasm;MPOBFVA O.I. C.G. H.G.
41.2 99.8 88.8 At5g56980 835800 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM O.I. C.G. H.G.
40.7 99.8 29.5 At3g25870 822182 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
40.4 99.8 349.1 At2g17840 816293 ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7) Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis. O.I. C.G. H.G.
40.3 99.8 190.0 At1g25560 839143 TEM1 (TEMPRANILLO 1) Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. O.I. C.G. H.G.
40.2 99.8 187.6 At2g47440 819357 DNAJ heat shock N-terminal domain-containing protein F:binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
39.8 99.8 299.4 At3g45970 823740 ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
38.7 99.8 205.4 At4g31800 829308 WRKY18 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. O.I. C.G. H.G.
38.5 99.8 246.0 At5g05600 830443 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFM O.I. C.G. H.G.
38.4 99.8 67.1 At2g01300 814658 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
38.3 99.8 207.8 At5g05440 830427 unknown protein F:molecular_function unknown;P:unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
38.3 99.8 145.1 At1g64360 842743 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P O.I. C.G. H.G.
37.6 99.7 142.0 At3g14050 820619 RSH2 (RELA-SPOT HOMOLOG 2) F:GTP diphosphokinase activity;P:response to abscisic acid stimulus, response to wounding;C:chloroplast;BOMPFAV O.I. C.G. H.G.
37.3 99.7 52.2 At5g67470 836883 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:in 7 components;MPOFBVA O.I. C.G. H.G.
36.7 99.7 110.9 At1g68410 843170 protein phosphatase 2C-related / PP2C-related F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:cellular_component unknown;PMOFBV O.I. C.G. H.G.
36.4 99.7 45.0 At5g41800 834185 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;PMFO O.I. C.G. H.G.
36.1 99.7 149.3 At3g25780 822169 AOC3 (ALLENE OXIDE CYCLASE 3) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884. O.I. C.G. H.G.
35.9 99.7 96.1 At3g45040 823639 phosphatidate cytidylyltransferase family protein Encodes a putative dolichol kinase. O.I. C.G. H.G.
35.8 99.7 17.2 At1g09950 837529 transcription factor-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
35.7 99.7 82.2 At4g18010 827526 AT5PTASE2 (MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays. O.I. C.G. H.G.
35.5 99.7 33.2 At5g43380 834356 TOPP6 encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers. O.I. C.G. H.G.
35.4 99.7 84.3 At4g03390 827941 SRF3 (STRUBBELIG-RECEPTOR FAMILY 3) F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
35.1 99.7 72.6 At5g49520 835012 WRKY48 member of WRKY Transcription Factor; Group II-c O.I. C.G. H.G.
35.0 99.7 136.1 At1g17620 838339 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
34.8 99.7 106.2 At1g75860 843919 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFB O.I. C.G. H.G.
34.7 99.7 104.5 At3g54810 824646 zinc finger (GATA type) family protein Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified. O.I. C.G. H.G.
34.5 99.7 164.6 At1g01140 839349 CIPK9 (CBL-INTERACTING PROTEIN KINASE 9) Encodes a CBL-interacting protein kinase with similarity to SOS2 O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
313.5	100.0	388.6	At2g27690	817315	CYP94C1	Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.	O.I.	C.G.	H.G.
280.8	100.0	120.6	At1g72790	843610	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;MPFOBVA	O.I.	C.G.	H.G.
277.7	100.0	187.8	At4g08170	826367	inositol 1,3,4-trisphosphate 5/6-kinase family protein	F:magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity;P:response to wounding;C:nucleus, cytoplasm;PMOB	O.I.	C.G.	H.G.
221.1	100.0	205.9	At4g03400	827938	DFL2 (DWARF IN LIGHT 2)	Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.	O.I.	C.G.	H.G.
188.3	100.0	169.1	At5g24030	832468	SLAH3 (SLAC1 HOMOLOGUE 3)	Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.	O.I.	C.G.	H.G.
174.4	100.0	55.3	At2g31010	817652	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVA	O.I.	C.G.	H.G.
163.3	99.9	101.4	At4g21400	827892	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
145.0	99.9	196.0	At3g63380	825513	calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)	F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV	O.I.	C.G.	H.G.
128.2	99.9	56.2	At2g38250	818404	DNA-binding protein-related	F:transcription factor activity;P:regulation of transcription;C:nucleolus;MOFPBV	O.I.	C.G.	H.G.
127.6	99.9	76.7	At5g46330	834676	FLS2 (FLAGELLIN-SENSITIVE 2)	Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.	O.I.	C.G.	H.G.
120.1	99.9	92.1	At4g32800	829416	AP2 domain-containing transcription factor TINY, putative	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.	O.I.	C.G.	H.G.
111.1	99.9	151.1	At2g34930	818058	disease resistance family protein	F:protein binding;P:signal transduction, defense response to fungus, defense response;C:cell wall;PMOBFAV	O.I.	C.G.	H.G.
110.2	99.9	135.7	At5g38710	833862	proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative	F:proline dehydrogenase activity;P:proline catabolic process, glutamate biosynthetic process;C:unknown;BOMFPVA	O.I.	C.G.	H.G.
107.1	99.9	146.8	At4g38420	829999	sks9 (SKU5 Similar 9)	F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOA	O.I.	C.G.	H.G.
105.8	99.9	255.6	At1g15010	838066	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PB	O.I.	C.G.	H.G.
105.7	99.9	178.1	At1g22570	838863	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;BPOMF	O.I.	C.G.	H.G.
101.4	99.9	8.3	At5g59580	836077	UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1)	F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity;P:metabolic process;C:unknown;PMBVOF	O.I.	C.G.	H.G.
100.5	99.9	136.8	At1g02660	839544	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;MOFPBV	O.I.	C.G.	H.G.
95.3	99.9	364.8	At1g35140	840399	PHI-1 (PHOSPHATE-INDUCED 1)	At1g35140 (At1g35140/T32G9_32) mRNA, complete cds	O.I.	C.G.	H.G.
94.9	99.9	111.5	At5g43170	834334	AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3)	Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.	O.I.	C.G.	H.G.
91.9	99.9	203.0	At2g27500	817295	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, nucleus, cytoplasm;PFO	O.I.	C.G.	H.G.
89.1	99.9	90.3	At1g50460	841468	HKL1 (HEXOKINASE-LIKE 1)	F:hexokinase activity, fructokinase activity, glucokinase activity, ATP binding;P:response to salt stress, response to cold, response to osmotic stress;C:mitochondrion, plastid;MFPOB	O.I.	C.G.	H.G.
85.5	99.9	97.1	At3g23590	821938	RFR1 (REF4-related 1)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
82.3	99.9	52.6	At3g05320	819696	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF	O.I.	C.G.	H.G.
81.2	99.9	95.7	At3g62150	825388	PGP21 (P-GLYCOPROTEIN 21)	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
81.1	99.9	117.1	At4g21410	827893	protein kinase family protein	F:kinase activity;P:response to abscisic acid stimulus;C:plasma membrane, vacuole;MPOBFVA	O.I.	C.G.	H.G.
78.7	99.9	370.6	At5g62360	836357	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
78.5	99.9	60.7	At1g75310	843868	AUL1	F:heat shock protein binding;P:protein folding;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
77.4	99.9	135.9	At1g11210	837662	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;PO	O.I.	C.G.	H.G.
76.3	99.9	68.1	At1g14780	838043	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
75.9	99.9	263.4	At3g59350	825104	serine/threonine protein kinase, putative	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
72.7	99.9	39.5	At3g05660	819733	AtRLP33 (Receptor Like Protein 33)	F:protein binding, kinase activity;P:signal transduction, defense response;C:chloroplast;PMOBFAV	O.I.	C.G.	H.G.
72.4	99.9	205.3	At5g55050	835596	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
72.4	99.9	136.1	At5g54380	835526	THE1 (THESEUS1)	F:protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
71.9	99.9	367.3	At2g38240	818403	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity;P:response to salt stress;C:unknown;POBFM	O.I.	C.G.	H.G.
70.1	99.9	54.7	At1g77640	844099	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
69.6	99.9	86.8	At3g58620	825031	TTL4 (Tetratricopetide-repeat Thioredoxin-Like 4)	F:binding;P:cell redox homeostasis;C:cellular_component unknown;MBOFPAV	O.I.	C.G.	H.G.
65.9	99.8	200.9	At4g36010	829757	pathogenesis-related thaumatin family protein	F:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOV	O.I.	C.G.	H.G.
65.4	99.8	54.0	At5g63450	836464	CYP94B1	member of CYP94B	O.I.	C.G.	H.G.
64.8	99.8	102.4	At1g35350	840424	-	F:unknown;P:unknown;C:integral to membrane;FMPOB	O.I.	C.G.	H.G.
64.6	99.8	49.8	At1g27910	839684	PUB45 (PLANT U-BOX 45)	Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.	O.I.	C.G.	H.G.
62.1	99.8	66.5	At1g50040	841428	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBV	O.I.	C.G.	H.G.
59.9	99.8	76.4	At5g60860	836207	AtRABA1f (Arabidopsis Rab GTPase homolog A1f)	F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBAV	O.I.	C.G.	H.G.
59.5	99.8	187.9	At5g65630	836689	GTE7 (Global transcription factor group E 7)	This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.	O.I.	C.G.	H.G.
59.1	99.8	116.5	At5g52050	835280	MATE efflux protein-related	F:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;BOPFAM	O.I.	C.G.	H.G.
58.9	99.8	30.0	At5g26770	832735	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
58.7	99.8	32.9	At5g04020	830281	calmodulin binding	F:calmodulin binding;P:biological_process unknown;C:plasma membrane;OMBPFAV	O.I.	C.G.	H.G.
58.3	99.8	61.5	At1g76580	843991	transcription factor	F:transcription factor activity;P:regulation of transcription;C:plasma membrane;OMFPB	O.I.	C.G.	H.G.
57.4	99.8	54.5	At1g26730	839214	EXS family protein / ERD1/XPR1/SYG1 family protein	F:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOB	O.I.	C.G.	H.G.
56.7	99.8	71.2	At5g03200	831908	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;MOPVF	O.I.	C.G.	H.G.
55.8	99.8	36.9	At1g63750	842679	ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding	F:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVA	O.I.	C.G.	H.G.
55.3	99.8	66.4	At3g16860	820941	COBL8 (COBRA-LIKE PROTEIN 8 PRECURSOR)	F:unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
54.9	99.8	215.8	At3g19680	821505	unknown protein	F:unknown;P:unknown;C:plasma membrane;OPMBF	O.I.	C.G.	H.G.
54.9	99.8	69.4	At1g61667	842463	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
52.7	99.8	84.7	At1g53430	841778	leucine-rich repeat family protein / protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
52.2	99.8	155.3	At5g16910	831554	CSLD2 (CELLULOSE-SYNTHASE LIKE D2)	encodes a gene similar to cellulose synthase. Located in golgi membranes.	O.I.	C.G.	H.G.
51.9	99.8	53.1	At3g02140	821182	TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2)	Encodes a protein that acts in the nucleus and is an important negative regulator of ABA and salt stress responses, and could play a critical role in controlling root elongation, floral initiation and starch degradation.	O.I.	C.G.	H.G.
50.3	99.8	152.4	At2g44500	819057	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
49.9	99.8	155.2	At1g17380	838310	JAZ5 (JASMONATE-ZIM-DOMAIN PROTEIN 5)	F:molecular_function unknown;P:response to jasmonic acid stimulus;C:cellular_component unknown;P	O.I.	C.G.	H.G.
49.3	99.8	69.2	At1g78280	844163	transferase, transferring glycosyl groups	F:transferase activity, transferring glycosyl groups;P:cell surface receptor linked signal transduction;C:cellular_component unknown;MBOFP	O.I.	C.G.	H.G.
47.9	99.8	273.2	At1g72450	843577	JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)	JAZ6 transcript levels rise in response to a jasmonate stimulus and a GFP:JAZ6 fusion protein localizes to the nucleus. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ6:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation.	O.I.	C.G.	H.G.
47.6	99.8	137.8	At1g21910	838793	AP2 domain-containing transcription factor family protein	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
47.0	99.8	46.7	At2g42010	818802	PLDBETA1 (PHOSPHOLIPASE D BETA 1)	phospholipase D (PLDbeta)	O.I.	C.G.	H.G.
46.7	99.8	20.5	At4g00130	825649	-	F:unknown;P:biological_process unknown;C:mitochondrion;PO	O.I.	C.G.	H.G.
45.5	99.8	145.2	At1g57630	842139	disease resistance protein (TIR class), putative	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P	O.I.	C.G.	H.G.
45.5	99.8	92.8	At1g21980	838801	ATPIP5K1 (PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1)	Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.	O.I.	C.G.	H.G.
45.0	99.8	39.8	At1g30640	839944	protein kinase, putative	F:protein kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVA	O.I.	C.G.	H.G.
43.8	99.8	178.5	At3g62720	825446	XT1 (XYLOSYLTRANSFERASE 1)	Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.	O.I.	C.G.	H.G.
43.7	99.8	135.6	At3g21230	821677	4CL5 (4-coumarate:CoA ligase 5)	The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo.	O.I.	C.G.	H.G.
42.2	99.8	222.1	At4g29670	829088	thioredoxin family protein	Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.	O.I.	C.G.	H.G.
41.9	99.8	115.4	At1g02400	839508	GA2OX6 (GIBBERELLIN 2-OXIDASE 6)	Encodes a gibberellin 2-oxidase.	O.I.	C.G.	H.G.
41.9	99.8	62.6	At3g14205	820638	phosphoinositide phosphatase family protein	F:phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
41.8	99.8	48.0	At5g23870	832452	pectinacetylesterase family protein	F:carboxylesterase activity;P:biological_process unknown;C:plant-type cell wall;PMOB	O.I.	C.G.	H.G.
41.4	99.8	104.4	At5g25440	832618	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:nucleus, cytoplasm;MPOBFVA	O.I.	C.G.	H.G.
41.2	99.8	88.8	At5g56980	835800	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM	O.I.	C.G.	H.G.
40.7	99.8	29.5	At3g25870	822182	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
40.4	99.8	349.1	At2g17840	816293	ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)	Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.	O.I.	C.G.	H.G.
40.3	99.8	190.0	At1g25560	839143	TEM1 (TEMPRANILLO 1)	Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT.	O.I.	C.G.	H.G.
40.2	99.8	187.6	At2g47440	819357	DNAJ heat shock N-terminal domain-containing protein	F:binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
39.8	99.8	299.4	At3g45970	823740	ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1)	member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
38.7	99.8	205.4	At4g31800	829308	WRKY18	Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.	O.I.	C.G.	H.G.
38.5	99.8	246.0	At5g05600	830443	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFM	O.I.	C.G.	H.G.
38.4	99.8	67.1	At2g01300	814658	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
38.3	99.8	207.8	At5g05440	830427	unknown protein	F:molecular_function unknown;P:unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
38.3	99.8	145.1	At1g64360	842743	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.6	99.7	142.0	At3g14050	820619	RSH2 (RELA-SPOT HOMOLOG 2)	F:GTP diphosphokinase activity;P:response to abscisic acid stimulus, response to wounding;C:chloroplast;BOMPFAV	O.I.	C.G.	H.G.
37.3	99.7	52.2	At5g67470	836883	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:in 7 components;MPOFBVA	O.I.	C.G.	H.G.
36.7	99.7	110.9	At1g68410	843170	protein phosphatase 2C-related / PP2C-related	F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:cellular_component unknown;PMOFBV	O.I.	C.G.	H.G.
36.4	99.7	45.0	At5g41800	834185	amino acid transporter family protein	F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;PMFO	O.I.	C.G.	H.G.
36.1	99.7	149.3	At3g25780	822169	AOC3 (ALLENE OXIDE CYCLASE 3)	Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.	O.I.	C.G.	H.G.
35.9	99.7	96.1	At3g45040	823639	phosphatidate cytidylyltransferase family protein	Encodes a putative dolichol kinase.	O.I.	C.G.	H.G.
35.8	99.7	17.2	At1g09950	837529	transcription factor-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
35.7	99.7	82.2	At4g18010	827526	AT5PTASE2 (MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2)	Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.	O.I.	C.G.	H.G.
35.5	99.7	33.2	At5g43380	834356	TOPP6	encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.	O.I.	C.G.	H.G.
35.4	99.7	84.3	At4g03390	827941	SRF3 (STRUBBELIG-RECEPTOR FAMILY 3)	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
35.1	99.7	72.6	At5g49520	835012	WRKY48	member of WRKY Transcription Factor; Group II-c	O.I.	C.G.	H.G.
35.0	99.7	136.1	At1g17620	838339	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
34.8	99.7	106.2	At1g75860	843919	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFB	O.I.	C.G.	H.G.
34.7	99.7	104.5	At3g54810	824646	zinc finger (GATA type) family protein	Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.	O.I.	C.G.	H.G.
34.5	99.7	164.6	At1g01140	839349	CIPK9 (CBL-INTERACTING PROTEIN KINASE 9)	Encodes a CBL-interacting protein kinase with similarity to SOS2	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-98-raw-cel-320188804
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-98-raw-cel-320188804 GSE experiment -

GSM ID -

Assay name E-MEXP-98-raw-cel-320188804

GSE experiment -