Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-828-raw-cel-1156922987
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
162.599.9127.2At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
121.999.988.3At1g60470842342AtGolS4 (Arabidopsis thaliana galactinol synthase 4)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOO.I.C.G.H.G.
106.599.988.8At2g35380818105peroxidase 20 (PER20) (P20)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBO.I.C.G.H.G.
106.299.9115.7At2g36690818241oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biosynthetic process;C:cellular_component unknown;POBFMO.I.C.G.H.G.
104.399.960.2At5g45080834539AtPP2-A6 (Phloem protein 2-A6)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
102.399.950.4At1g34670840371AtMYB93 (myb domain protein 93)Member of the R2R3 factor gene family.O.I.C.G.H.G.
83.599.990.2At2g23030816833SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9)encodes a member of SNF1-related protein kinases (SnRK2)O.I.C.G.H.G.
83.399.9121.7At3g18560821387unknown proteinF:unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
79.599.968.5At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
76.699.9116.7At5g44550834482integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
75.099.9108.1At1g59740842267proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOFO.I.C.G.H.G.
74.899.9455.8At1g08090837327ATNRT2:1 (NITRATE TRANSPORTER 2:1)High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.O.I.C.G.H.G.
72.399.9125.9At5g12420831117unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFO.I.C.G.H.G.
71.599.927.2At5g05400830422disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:chloroplast;PMBOFAO.I.C.G.H.G.
70.199.942.4At2g22590816790transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFOVO.I.C.G.H.G.
69.599.963.4At2g42060818806CHP-rich zinc finger protein, putativeF:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO.I.C.G.H.G.
68.499.9224.0At4g07820826263pathogenesis-related protein, putativeF:molecular_function unknown;P:unknown;C:endomembrane system, extracellular region;PMFBOO.I.C.G.H.G.
68.099.984.7At2g39380818523ATEXO70H2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
68.099.917.2At4g26560828763CBL7 (CALCINEURIN B-LIKE 7)Encodes calcineurin B-like protein 7 (CBL7).O.I.C.G.H.G.
66.999.850.9At1g33840840280unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
66.299.8112.8At2g22510816784hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFAO.I.C.G.H.G.
65.899.830.8At5g04730830351unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
63.799.8138.1At5g58860836003CYP86A1 (CYTOCHROME P450 86 A1)Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.O.I.C.G.H.G.
63.399.832.4At5g10100830874trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:chloroplast;BPMOFAO.I.C.G.H.G.
63.299.829.9At2g14440815932leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
62.199.8144.2At4g20390827787integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
60.099.8397.2At1g78000844135SULTR1Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.O.I.C.G.H.G.
59.999.892.5At4g25300828633oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFMO.I.C.G.H.G.
59.599.858.6At4g08620826426SULTR1High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.O.I.C.G.H.G.
58.099.8107.2At5g37690833748GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
57.999.8155.0At1g74460843787GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
57.799.855.4At5g07130830604LAC13 (laccase 13)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.H.G.
57.499.832.8At1g58170842184disease resistance-responsive protein-related / dirigent protein-relatedF:molecular_function unknown;P:N-terminal protein myristoylation, lignan biosynthetic process, defense response;C:endomembrane system;PO.I.C.G.H.G.
56.099.811.1At5g52350835311ATEXO70A3 (exocyst subunit EXO70 family protein A3)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
54.899.8180.3At2g23540816886GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
54.799.8428.3At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
54.499.8204.7At4g14630827113GLP9 (GERMIN-LIKE PROTEIN 9)germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.O.I.C.G.H.G.
54.099.879.7At1g68850843218peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
53.999.8160.1At2g40080818596ELF4 (EARLY FLOWERING 4)Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.O.I.C.G.H.G.
52.799.8104.5At5g09520830811hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMPOFVAO.I.C.G.H.G.
51.599.861.5At1g01190839233CYP78A8member of CYP78AO.I.C.G.H.G.
51.199.817.9At2g17060816211disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVO.I.C.G.H.G.
49.299.894.5At5g13580831202ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPVO.I.C.G.H.G.
47.899.834.7At3g51350824298aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOBAVO.I.C.G.H.G.
47.299.8361.4At5g50200835085WR3 (WOUND-RESPONSIVE 3)Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.O.I.C.G.H.G.
46.399.877.8At3g44540823579FAR4 (FATTY ACID REDUCTASE 4)F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBPOFO.I.C.G.H.G.
46.299.829.6At5g47740834825-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
46.099.8146.0At1g18970838478GLP4 (GERMIN-LIKE PROTEIN 4)Encodes a germin-like protein with possible oxalate oxidase activity (based on GenBank record).O.I.C.G.H.G.
45.799.825.1At1g78990844239transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO.I.C.G.H.G.
43.899.817.1At1g73270843661scpl6 (serine carboxypeptidase-like 6)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOO.I.C.G.H.G.
43.599.847.7At2g28160817362FRU (FER-LIKE REGULATOR OF IRON UPTAKE)Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.O.I.C.G.H.G.
43.299.8102.5At1g49310841354unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
43.299.816.9At2g28990817448leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
42.799.815.9At3g44840823618S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFO.I.C.G.H.G.
41.699.839.0At1g65510842863unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:endomembrane system;PO.I.C.G.H.G.
41.499.8437.8At2g01520814681MLP328 (MLP-LIKE PROTEIN 328)F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
41.299.8299.8At4g38080829964hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFAO.I.C.G.H.G.
41.299.8101.1At3g24290822017AMT1F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPAO.I.C.G.H.G.
41.099.8317.7At5g43350834353PHT1Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation.O.I.C.G.H.G.
39.799.840.1At2g47200819333unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
39.499.816.6At2g24710817007ATGLR2.3member of Putative ligand-gated ion channel subunit familyO.I.C.G.H.G.
38.899.855.5At1g31885840079transporterF:transporter activity;P:transport;C:integral to membrane, membrane;BPOMFAVO.I.C.G.H.G.
38.799.811.7At1g73410843676MYB54 (MYB DOMAIN PROTEIN 54)Encodes a putative transcription factor that is a member of the R2R3-MYB family.O.I.C.G.H.G.
38.299.8108.6At1g24280839044G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3)Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.O.I.C.G.H.G.
38.199.8104.8At1g29020839776calcium-binding EF hand family proteinF:calcium ion binding;P:unknown;C:endomembrane system;PMOAFO.I.C.G.H.G.
38.099.833.3At2g48080819420oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
37.999.829.0At2g28960817445leucine-rich repeat protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
37.399.774.2At3g16560820905protein phosphatase 2C-related / PP2C-relatedF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBVO.I.C.G.H.G.
37.199.721.9At1g77520844088O-methyltransferase family 2 proteinF:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOMO.I.C.G.H.G.
35.999.741.9At2g40370818630LAC5 (laccase 5)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.H.G.
35.499.751.1At3g49860824148ATARLA1B (ADP-ribosylation factor-like A1B)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.O.I.C.G.H.G.
35.099.7419.2At5g09530830812hydroxyproline-rich glycoprotein family proteinF:unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAO.I.C.G.H.G.
34.799.747.9At4g24140828514hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:endomembrane system;BOMPFAVO.I.C.G.H.G.
34.499.770.4At1g11540837697unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAPO.I.C.G.H.G.
34.199.754.3At5g26130832682-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.C.G.H.G.
33.099.760.3At1g30110839890ATNUDX25 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 25)F:bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity;P:diadenosine tetraphosphate catabolic process;C:cellular_component unknown;BOPMAO.I.C.G.H.G.
32.199.758.4At3g01260821171aldose 1-epimerase/ carbohydrate binding / catalytic/ isomeraseF:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVAO.I.C.G.H.G.
32.099.746.3At5g10210830885-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
31.899.749.7At1g78050844140PGM (PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE)F:intramolecular transferase activity, phosphotransferases, catalytic activity;P:response to nitrate, metabolic process;C:chloroplast;BOMFPAO.I.C.G.H.G.
31.599.7111.2At1g56320842085unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
31.299.729.6At1g528208417152-oxoglutarate-dependent dioxygenase, putativeF:oxidoreductase activity;P:unknown;C:unknown;POBFMO.I.C.G.H.G.
31.199.7127.9At5g09480830807hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPVAO.I.C.G.H.G.
30.999.7132.9At2g29995817550unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
30.799.735.5At4g10310826623HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1)encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.O.I.C.G.H.G.
30.799.735.5At5g23190832383CYP86B1cytochrome P450 CYP86B1, nuclear gene for chloroplast productO.I.C.G.H.G.
30.599.7294.0At4g33720829514pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.C.G.H.G.
30.499.710.5At1g30080839887glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOO.I.C.G.H.G.
30.299.778.8At5g40510834049-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FBPOAO.I.C.G.H.G.
30.199.784.1At5g45070834538AtPP2-A8 (Phloem protein 2-A8)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
29.599.724.4At2g28270817373DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
29.499.7236.5At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
29.499.730.2At3g44550823580FAR5 (FATTY ACID REDUCTASE 5)F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBFOPAO.I.C.G.H.G.
29.299.722.0At2g19060816423GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
29.099.724.9At3g24310822019MYB305 (myb domain protein 305)snapdragon myb protein 305 homolog (myb)O.I.C.G.H.G.
28.799.712.2At2g17050816210disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVO.I.C.G.H.G.
28.699.774.3At2g41480818746electron carrier/ heme binding / peroxidaseF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBMO.I.C.G.H.G.
28.599.785.8At5g25890832658IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene.O.I.C.G.H.G.
27.999.746.7At5g59680836089leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
27.699.711.5At1g17950838374MYB52 (MYB DOMAIN PROTEIN 52)putative transcription factor: R2R3-MYB transcription familyO.I.C.G.H.G.
27.599.729.7At5g07680830661ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.



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