Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-828-raw-cel-1156922684
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
286.5100.053.6At4g33710829513pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBOO.I.C.G.H.G.
260.4100.0399.5At1g64590842767short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAO.I.C.G.H.G.
255.2100.0116.5At5g07130830604LAC13 (laccase 13)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.H.G.
237.8100.0118.5At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
235.8100.0153.2At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
164.299.997.4At4g08620826426SULTR1High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.O.I.C.G.H.G.
144.599.9633.4At1g08090837327ATNRT2:1 (NITRATE TRANSPORTER 2:1)High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.O.I.C.G.H.G.
144.299.9258.3At1g18970838478GLP4 (GERMIN-LIKE PROTEIN 4)Encodes a germin-like protein with possible oxalate oxidase activity (based on GenBank record).O.I.C.G.H.G.
135.299.9167.3At5g09520830811hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMPOFVAO.I.C.G.H.G.
133.899.947.1At5g10100830874trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:chloroplast;BPMOFAO.I.C.G.H.G.
125.299.933.4At4g04990825841unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOFBVO.I.C.G.H.G.
114.999.948.2At2g28270817373DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
108.699.9454.5At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
106.599.988.5At1g01190839233CYP78A8member of CYP78AO.I.C.G.H.G.
103.799.9173.8At2g48140819426EDA4 (embryo sac development arrest 4)F:lipid binding;P:megagametogenesis, lipid transport;C:anchored to membrane;PBMOFVO.I.C.G.H.G.
87.099.9129.3At2g22510816784hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFAO.I.C.G.H.G.
82.899.9167.8At2g44010819006unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
78.599.9418.7At3g22620821833protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:chloroplast envelope;POBMFVO.I.C.G.H.G.
76.899.965.9At1g26240839165proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
74.599.969.0At1g60470842342AtGolS4 (Arabidopsis thaliana galactinol synthase 4)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOO.I.C.G.H.G.
74.399.9611.3At5g09530830812hydroxyproline-rich glycoprotein family proteinF:unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAO.I.C.G.H.G.
66.899.815.6At1g07130837223STN1Encodes a protein with similarity to yeast STN1, an OB fold protein involved in protecting yeast telomeres. In Arabidopsis, loss of STN1 function mutations exhibit gross morphological abnormalities and defects in telomere architecture and maintenance. STN1 likely plays a role in telomere end capping.O.I.C.G.H.G.
65.699.8109.1At5g13580831202ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPVO.I.C.G.H.G.
64.699.89.0At1g80320844372oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
63.099.860.3At2g42060818806CHP-rich zinc finger protein, putativeF:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO.I.C.G.H.G.
61.099.879.4At3g53510824519ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPVO.I.C.G.H.G.
60.999.8158.9At1g74460843787GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
60.599.8363.0At4g38080829964hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFAO.I.C.G.H.G.
58.499.878.7At1g19250838508FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)FMO1 is required for full expression of TIR-NB-LRR–conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.O.I.C.G.H.G.
58.399.8459.8At3g54040824571photoassimilate-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
57.999.884.2At1g08320837353bZIP family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFO.I.C.G.H.G.
57.199.828.1At1g78990844239transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO.I.C.G.H.G.
56.899.862.1At4g31875829317unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
55.999.8125.9At2g48130819425protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;PBOMO.I.C.G.H.G.
54.799.8456.7At3g53980824565protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
54.199.818.2At2g43390818940unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
53.499.879.3At1g68850843218peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
51.599.8100.0At4g17280827442-F:unknown;P:multicellular organismal development;C:membrane;PO.I.C.G.H.G.
51.499.822.1At1g67710843096ARR11 (RESPONSE REGULATOR 11)Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.O.I.C.G.H.G.
48.799.8193.6At4g14630827113GLP9 (GERMIN-LIKE PROTEIN 9)germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.O.I.C.G.H.G.
48.099.825.0At1g03700839428-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
47.699.818.9At3g45330823671lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
47.099.82.2At4g038103770158transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
46.199.892.7At3g05950819765germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFBOO.I.C.G.H.G.
45.999.842.8At1g54540841896-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
45.999.828.2At1g55780842027metal ion bindingF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PO.I.C.G.H.G.
45.599.8106.3At3g24290822017AMT1F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPAO.I.C.G.H.G.
44.299.8180.1At4g07820826263pathogenesis-related protein, putativeF:molecular_function unknown;P:unknown;C:endomembrane system, extracellular region;PMFBOO.I.C.G.H.G.
44.299.840.1At3g27150822334kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFAO.I.C.G.H.G.
42.599.8443.7At2g01520814681MLP328 (MLP-LIKE PROTEIN 328)F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
41.399.816.8At4g10510826643subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOAFMO.I.C.G.H.G.
40.099.89.6At5g58910836008LAC16 (laccase 16)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.H.G.
39.599.840.3At4g10310826623HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1)encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.O.I.C.G.H.G.
39.399.815.3At3g44840823618S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFO.I.C.G.H.G.
38.599.822.1At1g55990842050glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPMO.I.C.G.H.G.
38.399.840.5At3g22930821865calmodulin, putativeF:calcium ion binding;P:biological_process unknown;C:unknown;MOFPBVO.I.C.G.H.G.
37.899.873.7At1g11540837697unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAPO.I.C.G.H.G.
36.699.7302.8At1g28400839738unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFBPVAO.I.C.G.H.G.
36.299.725.8At1g79320844270AtMC6 (metacaspase 6)F:cysteine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;BOFPAO.I.C.G.H.G.
36.199.716.9At1g52800841713oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
35.799.7142.8At2g29995817550unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
34.899.767.8At4g36610829813hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOMPFAO.I.C.G.H.G.
34.099.732.5At4g15740827252C2 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;PMFOO.I.C.G.H.G.
33.699.788.8At5g45070834538AtPP2-A8 (Phloem protein 2-A8)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
33.599.7110.3At5g41040834106transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBOO.I.C.G.H.G.
33.199.736.8At5g23190832383CYP86B1cytochrome P450 CYP86B1, nuclear gene for chloroplast productO.I.C.G.H.G.
32.399.762.7At1g74590843799GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
32.199.728.4At3g51350824298aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOBAVO.I.C.G.H.G.
31.799.7194.7At4g30670829190unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
31.799.749.8At5g59680836089leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
31.499.728.4At5g19410832061ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:chloroplast, membrane;BOMFAPVO.I.C.G.H.G.
31.499.715.0At5g07390830630ATRBOHA (respiratory burst oxidase homolog A)F:calcium ion binding;P:defense response;C:intrinsic to plasma membrane;MFPOBAO.I.C.G.H.G.
30.099.728.8At3g22800821851leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
29.899.792.7At1g29020839776calcium-binding EF hand family proteinF:calcium ion binding;P:unknown;C:endomembrane system;PMOAFO.I.C.G.H.G.
29.699.7377.0At4g15390827205transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
29.599.728.8At1g528208417152-oxoglutarate-dependent dioxygenase, putativeF:oxidoreductase activity;P:unknown;C:unknown;POBFMO.I.C.G.H.G.
29.399.784.3At1g49310841354unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
29.099.7200.9At3g02910821189-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOAO.I.C.G.H.G.
28.799.7170.1At5g22630832326ADT5 (arogenate dehydratase 5)Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].O.I.C.G.H.G.
27.999.745.1At4g35380829691guanine nucleotide exchange family proteinF:binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBAO.I.C.G.H.G.
27.799.786.5At3g21510821705AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).O.I.C.G.H.G.
27.499.765.3At1g59740842267proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOFO.I.C.G.H.G.
26.799.739.7At5g35580833523ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
26.699.710.8At4g26560828763CBL7 (CALCINEURIN B-LIKE 7)Encodes calcineurin B-like protein 7 (CBL7).O.I.C.G.H.G.
26.399.7254.4At5g43350834353PHT1Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation.O.I.C.G.H.G.
26.399.775.9At5g12420831117unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFO.I.C.G.H.G.
26.299.738.0At3g15300820761VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMO.I.C.G.H.G.
26.099.718.3At5g02640831166unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
25.999.753.7At3g20340821578-Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.O.I.C.G.H.G.
25.799.715.9At5g50590835128AtHSD4 (hydroxysteroid dehydrogenase 4)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
24.999.690.9At1g67030843022ZFP6 (ZINC FINGER PROTEIN 6)Encodes a zinc finger protein containing only a single zinc finger.O.I.C.G.H.G.
24.399.615.8At3g32040822957geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putativeF:unknown;P:isoprenoid biosynthetic process;C:unknown;OBPFMAVO.I.C.G.H.G.
24.199.67.3At5g52350835311ATEXO70A3 (exocyst subunit EXO70 family protein A3)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
24.099.69.2At2g19200816437unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
23.399.6195.9At3g21770821731peroxidase 30 (PER30) (P30) (PRXR9)F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBMO.I.C.G.H.G.
23.099.630.0At3g31415822906terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:unknown;C:cellular_component unknown;POO.I.C.G.H.G.
22.699.681.1At3g16340820881PDR1F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMFAPVO.I.C.G.H.G.
22.699.626.5At3g44550823580FAR5 (FATTY ACID REDUCTASE 5)F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBFOPAO.I.C.G.H.G.
22.699.611.9At1g68940843228armadillo/beta-catenin repeat protein-related / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;POMBFVO.I.C.G.H.G.
22.099.619.5At2g23700816901unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBFO.I.C.G.H.G.



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