CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-828-raw-cel-1156922659

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
290.8 100.0 236.4 At2g22510 816784 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFA O.I. C.G. H.G.
261.1 100.0 117.8 At5g07130 830604 LAC13 (laccase 13) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
197.9 100.0 348.3 At1g64590 842767 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
139.3 99.9 169.8 At5g09520 830811 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMPOFVA O.I. C.G. H.G.
132.8 99.9 817.0 At5g09530 830812 hydroxyproline-rich glycoprotein family protein F:unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
119.3 99.9 121.8 At5g13900 831237 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P O.I. C.G. H.G.
114.5 99.9 144.2 At5g13580 831202 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPV O.I. C.G. H.G.
111.2 99.9 11.8 At1g80320 844372 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM O.I. C.G. H.G.
108.7 99.9 104.0 At1g70880 843425 Bet v I allergen family protein F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
104.0 99.9 174.1 At2g48140 819426 EDA4 (embryo sac development arrest 4) F:lipid binding;P:megagametogenesis, lipid transport;C:anchored to membrane;PBMOFV O.I. C.G. H.G.
101.4 99.9 31.6 At5g50590 835128 AtHSD4 (hydroxysteroid dehydrogenase 4) F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
101.1 99.9 62.9 At3g31415 822906 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
96.8 99.9 165.6 At2g48130 819425 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;PBOM O.I. C.G. H.G.
92.6 99.9 28.7 At4g04990 825841 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOFBV O.I. C.G. H.G.
92.2 99.9 453.7 At3g22620 821833 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:chloroplast envelope;POBMFV O.I. C.G. H.G.
87.8 99.9 49.6 At1g52820 841715 2-oxoglutarate-dependent dioxygenase, putative F:oxidoreductase activity;P:unknown;C:unknown;POBFM O.I. C.G. H.G.
82.2 99.9 22.5 At2g43390 818940 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
78.1 99.9 36.8 At1g55780 842027 metal ion binding F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
76.3 99.9 94.7 At1g68850 843218 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
75.2 99.9 186.5 At1g18970 838478 GLP4 (GERMIN-LIKE PROTEIN 4) Encodes a germin-like protein with possible oxalate oxidase activity (based on GenBank record). O.I. C.G. H.G.
73.0 99.9 26.7 At5g16770 831540 AtMYB9 (myb domain protein 9) Member of the R2R3 factor gene family. O.I. C.G. H.G.
68.8 99.9 95.2 At4g36610 829813 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOMPFA O.I. C.G. H.G.
67.8 99.9 167.7 At1g74460 843787 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
67.5 99.8 433.0 At1g08090 837327 ATNRT2:1 (NITRATE TRANSPORTER 2:1) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake. O.I. C.G. H.G.
66.5 99.8 29.0 At1g55990 842050 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPM O.I. C.G. H.G.
65.4 99.8 61.5 At2g42060 818806 CHP-rich zinc finger protein, putative F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PM O.I. C.G. H.G.
64.3 99.8 545.7 At2g01520 814681 MLP328 (MLP-LIKE PROTEIN 328) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
60.4 99.8 80.1 At1g19250 838508 FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1) FMO1 is required for full expression of TIR-NB-LRR�conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. O.I. C.G. H.G.
56.5 99.8 57.8 At5g37450 833722 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
56.1 99.8 142.8 At5g41040 834106 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO O.I. C.G. H.G.
56.1 99.8 64.3 At1g01190 839233 CYP78A8 member of CYP78A O.I. C.G. H.G.
55.5 99.8 32.5 At2g42250 818826 CYP712A1 member of CYP712A O.I. C.G. H.G.
55.0 99.8 346.2 At4g38080 829964 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFA O.I. C.G. H.G.
53.9 99.8 29.9 At5g10100 830874 trehalose-6-phosphate phosphatase, putative F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:chloroplast;BPMOFA O.I. C.G. H.G.
52.6 99.8 100.9 At4g17280 827442 - F:unknown;P:multicellular organismal development;C:membrane;P O.I. C.G. H.G.
48.8 99.8 44.2 At1g54540 841896 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
48.1 99.8 52.7 At4g08620 826426 SULTR1 High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane. O.I. C.G. H.G.
47.5 99.8 191.3 At4g14630 827113 GLP9 (GERMIN-LIKE PROTEIN 9) germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell. O.I. C.G. H.G.
46.9 99.8 24.7 At1g03700 839428 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
46.0 99.8 55.9 At4g31875 829317 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
45.4 99.8 30.3 At2g28270 817373 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
44.4 99.8 290.5 At1g26250 839166 proline-rich extensin, putative F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVA O.I. C.G. H.G.
44.4 99.8 18.7 At1g52800 841713 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:unknown;C:cellular_component unknown;POBFM O.I. C.G. H.G.
43.6 99.8 97.8 At5g12420 831117 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAF O.I. C.G. H.G.
42.9 99.8 13.7 At4g26560 828763 CBL7 (CALCINEURIN B-LIKE 7) Encodes calcineurin B-like protein 7 (CBL7). O.I. C.G. H.G.
42.2 99.8 20.9 At3g32040 822957 geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative F:unknown;P:isoprenoid biosynthetic process;C:unknown;OBPFMAV O.I. C.G. H.G.
39.7 99.8 19.4 At1g67710 843096 ARR11 (RESPONSE REGULATOR 11) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. O.I. C.G. H.G.
39.2 99.8 37.8 At1g65510 842863 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:endomembrane system;P O.I. C.G. H.G.
38.1 99.8 31.3 At2g22590 816790 transferase, transferring glycosyl groups F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFOV O.I. C.G. H.G.
37.8 99.8 16.8 At3g45330 823671 lectin protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
37.4 99.7 48.9 At1g60470 842342 AtGolS4 (Arabidopsis thaliana galactinol synthase 4) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO O.I. C.G. H.G.
36.3 99.7 19.8 At3g51540 824317 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBVPA O.I. C.G. H.G.
35.6 99.7 9.0 At5g58910 836008 LAC16 (laccase 16) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
34.3 99.7 29.6 At5g19410 832061 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:chloroplast, membrane;BOMFAPV O.I. C.G. H.G.
34.0 99.7 29.2 At3g51350 824298 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOBAV O.I. C.G. H.G.
33.9 99.7 37.3 At5g23190 832383 CYP86B1 cytochrome P450 CYP86B1, nuclear gene for chloroplast product O.I. C.G. H.G.
32.2 99.7 57.7 At3g53510 824519 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV O.I. C.G. H.G.
31.1 99.7 344.5 At3g53980 824565 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
31.1 99.7 41.0 At3g50400 824204 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
30.9 99.7 66.7 At1g11540 837697 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAP O.I. C.G. H.G.
30.7 99.7 191.6 At4g30670 829190 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
30.7 99.7 41.6 At1g26240 839165 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVA O.I. C.G. H.G.
29.6 99.7 454.8 At3g22600 821832 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;POM O.I. C.G. H.G.
29.3 99.7 201.9 At3g02910 821189 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOA O.I. C.G. H.G.
29.2 99.7 18.6 At4g32860 829422 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
29.1 99.7 10.1 At2g19200 816437 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.9 99.7 82.4 At5g45070 834538 AtPP2-A8 (Phloem protein 2-A8) F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P O.I. C.G. H.G.
28.7 99.7 32.4 At3g27150 822334 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA O.I. C.G. H.G.
28.5 99.7 8.0 At5g52350 835311 ATEXO70A3 (exocyst subunit EXO70 family protein A3) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
28.3 99.7 34.6 At2g16760 816177 - F:molecular_function unknown;P:unknown;C:endoplasmic reticulum;PBO O.I. C.G. H.G.
28.1 99.7 27.8 At3g22800 821851 leucine-rich repeat family protein / extensin family protein F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVA O.I. C.G. H.G.
27.7 99.7 14.1 At5g07390 830630 ATRBOHA (respiratory burst oxidase homolog A) F:calcium ion binding;P:defense response;C:intrinsic to plasma membrane;MFPOBA O.I. C.G. H.G.
27.3 99.7 13.7 At4g10510 826643 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOAFM O.I. C.G. H.G.
26.7 99.7 80.6 At1g49310 841354 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
26.2 99.7 34.9 At1g70170 843353 MMP (MATRIX METALLOPROTEINASE) mutant has Late flowering; Early senescence; Matrix Metalloproteinase O.I. C.G. H.G.
26.0 99.7 73.8 At4g17670 827487 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
25.9 99.7 63.5 At1g59740 842267 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOF O.I. C.G. H.G.
25.8 99.7 81.6 At5g25890 832658 IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28) encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene. O.I. C.G. H.G.
25.4 99.6 364.8 At2g01530 814682 MLP329 (MLP-LIKE PROTEIN 329) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
25.3 99.6 64.2 At2g29750 817525 UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1) F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF O.I. C.G. H.G.
25.1 99.6 250.9 At1g28400 839738 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFBPVA O.I. C.G. H.G.
24.8 99.6 27.7 At2g40160 818607 - F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
24.8 99.6 25.8 At5g01490 831754 CAX4 (CATION EXCHANGER 4) Encodes a cation/proton antiporter, a member of Low affinity calcium antiporter CAX2 family. O.I. C.G. H.G.
24.3 99.6 24.5 At1g34670 840371 AtMYB93 (myb domain protein 93) Member of the R2R3 factor gene family. O.I. C.G. H.G.
23.8 99.6 31.5 At5g15130 831365 WRKY72 member of WRKY Transcription Factor; Group II-b O.I. C.G. H.G.
23.6 99.6 292.5 At3g54040 824571 photoassimilate-responsive protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
23.1 99.6 33.7 At1g49000 841322 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
22.9 99.6 165.4 At4g30450 829168 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFVA O.I. C.G. H.G.
22.9 99.6 19.8 At2g23700 816901 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBF O.I. C.G. H.G.
22.6 99.6 192.6 At3g21770 821731 peroxidase 30 (PER30) (P30) (PRXR9) F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBM O.I. C.G. H.G.
21.9 99.6 30.0 At4g10310 826623 HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1) encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots. O.I. C.G. H.G.
21.7 99.6 47.8 At2g39380 818523 ATEXO70H2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H2) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
21.5 99.6 30.3 At3g22930 821865 calmodulin, putative F:calcium ion binding;P:biological_process unknown;C:unknown;MOFPBV O.I. C.G. H.G.
21.3 99.6 69.7 At3g26470 822252 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
20.9 99.6 72.0 At3g24290 822017 AMT1 F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPA O.I. C.G. H.G.
20.7 99.6 33.6 At2g28570 817405 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
20.4 99.6 91.7 At5g50760 835148 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
20.4 99.6 20.6 At5g10280 830892 ATMYB92 (MYB DOMAIN PROTEIN 92) Encodes a putative transcription factor (MYB92). O.I. C.G. H.G.
20.3 99.6 16.7 At1g78990 844239 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB O.I. C.G. H.G.
20.2 99.6 107.5 At2g29995 817550 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
290.8	100.0	236.4	At2g22510	816784	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFA	O.I.	C.G.	H.G.
261.1	100.0	117.8	At5g07130	830604	LAC13 (laccase 13)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
197.9	100.0	348.3	At1g64590	842767	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA	O.I.	C.G.	H.G.
139.3	99.9	169.8	At5g09520	830811	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMPOFVA	O.I.	C.G.	H.G.
132.8	99.9	817.0	At5g09530	830812	hydroxyproline-rich glycoprotein family protein	F:unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
119.3	99.9	121.8	At5g13900	831237	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;P	O.I.	C.G.	H.G.
114.5	99.9	144.2	At5g13580	831202	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
111.2	99.9	11.8	At1g80320	844372	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
108.7	99.9	104.0	At1g70880	843425	Bet v I allergen family protein	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
104.0	99.9	174.1	At2g48140	819426	EDA4 (embryo sac development arrest 4)	F:lipid binding;P:megagametogenesis, lipid transport;C:anchored to membrane;PBMOFV	O.I.	C.G.	H.G.
101.4	99.9	31.6	At5g50590	835128	AtHSD4 (hydroxysteroid dehydrogenase 4)	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
101.1	99.9	62.9	At3g31415	822906	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
96.8	99.9	165.6	At2g48130	819425	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;PBOM	O.I.	C.G.	H.G.
92.6	99.9	28.7	At4g04990	825841	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOFBV	O.I.	C.G.	H.G.
92.2	99.9	453.7	At3g22620	821833	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:chloroplast envelope;POBMFV	O.I.	C.G.	H.G.
87.8	99.9	49.6	At1g52820	841715	2-oxoglutarate-dependent dioxygenase, putative	F:oxidoreductase activity;P:unknown;C:unknown;POBFM	O.I.	C.G.	H.G.
82.2	99.9	22.5	At2g43390	818940	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
78.1	99.9	36.8	At1g55780	842027	metal ion binding	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
76.3	99.9	94.7	At1g68850	843218	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
75.2	99.9	186.5	At1g18970	838478	GLP4 (GERMIN-LIKE PROTEIN 4)	Encodes a germin-like protein with possible oxalate oxidase activity (based on GenBank record).	O.I.	C.G.	H.G.
73.0	99.9	26.7	At5g16770	831540	AtMYB9 (myb domain protein 9)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
68.8	99.9	95.2	At4g36610	829813	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOMPFA	O.I.	C.G.	H.G.
67.8	99.9	167.7	At1g74460	843787	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
67.5	99.8	433.0	At1g08090	837327	ATNRT2:1 (NITRATE TRANSPORTER 2:1)	High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.	O.I.	C.G.	H.G.
66.5	99.8	29.0	At1g55990	842050	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPM	O.I.	C.G.	H.G.
65.4	99.8	61.5	At2g42060	818806	CHP-rich zinc finger protein, putative	F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
64.3	99.8	545.7	At2g01520	814681	MLP328 (MLP-LIKE PROTEIN 328)	F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
60.4	99.8	80.1	At1g19250	838508	FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)	FMO1 is required for full expression of TIR-NB-LRR�conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.	O.I.	C.G.	H.G.
56.5	99.8	57.8	At5g37450	833722	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
56.1	99.8	142.8	At5g41040	834106	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
56.1	99.8	64.3	At1g01190	839233	CYP78A8	member of CYP78A	O.I.	C.G.	H.G.
55.5	99.8	32.5	At2g42250	818826	CYP712A1	member of CYP712A	O.I.	C.G.	H.G.
55.0	99.8	346.2	At4g38080	829964	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFA	O.I.	C.G.	H.G.
53.9	99.8	29.9	At5g10100	830874	trehalose-6-phosphate phosphatase, putative	F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:chloroplast;BPMOFA	O.I.	C.G.	H.G.
52.6	99.8	100.9	At4g17280	827442	-	F:unknown;P:multicellular organismal development;C:membrane;P	O.I.	C.G.	H.G.
48.8	99.8	44.2	At1g54540	841896	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
48.1	99.8	52.7	At4g08620	826426	SULTR1	High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.	O.I.	C.G.	H.G.
47.5	99.8	191.3	At4g14630	827113	GLP9 (GERMIN-LIKE PROTEIN 9)	germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.	O.I.	C.G.	H.G.
46.9	99.8	24.7	At1g03700	839428	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
46.0	99.8	55.9	At4g31875	829317	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
45.4	99.8	30.3	At2g28270	817373	DC1 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
44.4	99.8	290.5	At1g26250	839166	proline-rich extensin, putative	F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVA	O.I.	C.G.	H.G.
44.4	99.8	18.7	At1g52800	841713	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity;P:unknown;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
43.6	99.8	97.8	At5g12420	831117	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAF	O.I.	C.G.	H.G.
42.9	99.8	13.7	At4g26560	828763	CBL7 (CALCINEURIN B-LIKE 7)	Encodes calcineurin B-like protein 7 (CBL7).	O.I.	C.G.	H.G.
42.2	99.8	20.9	At3g32040	822957	geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative	F:unknown;P:isoprenoid biosynthetic process;C:unknown;OBPFMAV	O.I.	C.G.	H.G.
39.7	99.8	19.4	At1g67710	843096	ARR11 (RESPONSE REGULATOR 11)	Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.	O.I.	C.G.	H.G.
39.2	99.8	37.8	At1g65510	842863	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:endomembrane system;P	O.I.	C.G.	H.G.
38.1	99.8	31.3	At2g22590	816790	transferase, transferring glycosyl groups	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFOV	O.I.	C.G.	H.G.
37.8	99.8	16.8	At3g45330	823671	lectin protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
37.4	99.7	48.9	At1g60470	842342	AtGolS4 (Arabidopsis thaliana galactinol synthase 4)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO	O.I.	C.G.	H.G.
36.3	99.7	19.8	At3g51540	824317	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBVPA	O.I.	C.G.	H.G.
35.6	99.7	9.0	At5g58910	836008	LAC16 (laccase 16)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
34.3	99.7	29.6	At5g19410	832061	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:chloroplast, membrane;BOMFAPV	O.I.	C.G.	H.G.
34.0	99.7	29.2	At3g51350	824298	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOBAV	O.I.	C.G.	H.G.
33.9	99.7	37.3	At5g23190	832383	CYP86B1	cytochrome P450 CYP86B1, nuclear gene for chloroplast product	O.I.	C.G.	H.G.
32.2	99.7	57.7	At3g53510	824519	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
31.1	99.7	344.5	At3g53980	824565	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
31.1	99.7	41.0	At3g50400	824204	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
30.9	99.7	66.7	At1g11540	837697	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAP	O.I.	C.G.	H.G.
30.7	99.7	191.6	At4g30670	829190	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
30.7	99.7	41.6	At1g26240	839165	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVA	O.I.	C.G.	H.G.
29.6	99.7	454.8	At3g22600	821832	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;POM	O.I.	C.G.	H.G.
29.3	99.7	201.9	At3g02910	821189	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOA	O.I.	C.G.	H.G.
29.2	99.7	18.6	At4g32860	829422	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
29.1	99.7	10.1	At2g19200	816437	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.9	99.7	82.4	At5g45070	834538	AtPP2-A8 (Phloem protein 2-A8)	F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P	O.I.	C.G.	H.G.
28.7	99.7	32.4	At3g27150	822334	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA	O.I.	C.G.	H.G.
28.5	99.7	8.0	At5g52350	835311	ATEXO70A3 (exocyst subunit EXO70 family protein A3)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
28.3	99.7	34.6	At2g16760	816177	-	F:molecular_function unknown;P:unknown;C:endoplasmic reticulum;PBO	O.I.	C.G.	H.G.
28.1	99.7	27.8	At3g22800	821851	leucine-rich repeat family protein / extensin family protein	F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVA	O.I.	C.G.	H.G.
27.7	99.7	14.1	At5g07390	830630	ATRBOHA (respiratory burst oxidase homolog A)	F:calcium ion binding;P:defense response;C:intrinsic to plasma membrane;MFPOBA	O.I.	C.G.	H.G.
27.3	99.7	13.7	At4g10510	826643	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOAFM	O.I.	C.G.	H.G.
26.7	99.7	80.6	At1g49310	841354	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
26.2	99.7	34.9	At1g70170	843353	MMP (MATRIX METALLOPROTEINASE)	mutant has Late flowering; Early senescence; Matrix Metalloproteinase	O.I.	C.G.	H.G.
26.0	99.7	73.8	At4g17670	827487	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
25.9	99.7	63.5	At1g59740	842267	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOF	O.I.	C.G.	H.G.
25.8	99.7	81.6	At5g25890	832658	IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)	encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene.	O.I.	C.G.	H.G.
25.4	99.6	364.8	At2g01530	814682	MLP329 (MLP-LIKE PROTEIN 329)	F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
25.3	99.6	64.2	At2g29750	817525	UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1)	F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF	O.I.	C.G.	H.G.
25.1	99.6	250.9	At1g28400	839738	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFBPVA	O.I.	C.G.	H.G.
24.8	99.6	27.7	At2g40160	818607	-	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
24.8	99.6	25.8	At5g01490	831754	CAX4 (CATION EXCHANGER 4)	Encodes a cation/proton antiporter, a member of Low affinity calcium antiporter CAX2 family.	O.I.	C.G.	H.G.
24.3	99.6	24.5	At1g34670	840371	AtMYB93 (myb domain protein 93)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
23.8	99.6	31.5	At5g15130	831365	WRKY72	member of WRKY Transcription Factor; Group II-b	O.I.	C.G.	H.G.
23.6	99.6	292.5	At3g54040	824571	photoassimilate-responsive protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
23.1	99.6	33.7	At1g49000	841322	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
22.9	99.6	165.4	At4g30450	829168	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFVA	O.I.	C.G.	H.G.
22.9	99.6	19.8	At2g23700	816901	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBF	O.I.	C.G.	H.G.
22.6	99.6	192.6	At3g21770	821731	peroxidase 30 (PER30) (P30) (PRXR9)	F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBM	O.I.	C.G.	H.G.
21.9	99.6	30.0	At4g10310	826623	HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1)	encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.	O.I.	C.G.	H.G.
21.7	99.6	47.8	At2g39380	818523	ATEXO70H2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H2)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
21.5	99.6	30.3	At3g22930	821865	calmodulin, putative	F:calcium ion binding;P:biological_process unknown;C:unknown;MOFPBV	O.I.	C.G.	H.G.
21.3	99.6	69.7	At3g26470	822252	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
20.9	99.6	72.0	At3g24290	822017	AMT1	F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPA	O.I.	C.G.	H.G.
20.7	99.6	33.6	At2g28570	817405	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
20.4	99.6	91.7	At5g50760	835148	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
20.4	99.6	20.6	At5g10280	830892	ATMYB92 (MYB DOMAIN PROTEIN 92)	Encodes a putative transcription factor (MYB92).	O.I.	C.G.	H.G.
20.3	99.6	16.7	At1g78990	844239	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB	O.I.	C.G.	H.G.
20.2	99.6	107.5	At2g29995	817550	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-828-raw-cel-1156922659
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-828-raw-cel-1156922659 GSE experiment -

GSM ID -

Assay name E-MEXP-828-raw-cel-1156922659

GSE experiment -