Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-739-raw-cel-1099467393
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
303.5100.055.7At1g49150841338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
251.9100.051.2At5g39820833978anac094 (Arabidopsis NAC domain containing protein 94)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POMO.I.C.G.H.G.
248.9100.097.9At2g38340818414AP2 domain-containing transcription factor, putative (DRE2B)encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.O.I.C.G.H.G.
176.2100.0162.0At5g20910832215zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:nucleus;PMOFVO.I.C.G.H.G.
142.199.9111.9At5g05190830401unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVO.I.C.G.H.G.
135.799.9273.7At3g53230824489cell division cycle protein 48, putative / CDC48, putativeF:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAVO.I.C.G.H.G.
134.899.9175.2At1g32940840188SBT3.5F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFMO.I.C.G.H.G.
109.999.9141.5At1g09100837431RPT5B (26S proteasome AAA-ATPase subunit RPT5B)Encodes RPT5b (Regulatory Particle 5b), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.O.I.C.G.H.G.
109.599.965.9At1g05880837098nucleic acid binding / protein binding / structural molecule/ zinc ion bindingF:protein binding, structural molecule activity, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:tight junction;MOPFO.I.C.G.H.G.
109.499.951.7At1g31280840016AGO2 (argonaute 2)An Argonaute geneO.I.C.G.H.G.
102.399.935.2At5g46080834649protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
100.999.9187.0At3g28210822447PMZEncodes a putative zinc finger protein (PMZ).O.I.C.G.H.G.
99.999.9220.0At3g13330820533bindingF:binding;P:unknown;C:cellular_component unknown;FMOPO.I.C.G.H.G.
91.499.927.0At1g32950840189subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFMO.I.C.G.H.G.
89.399.9266.7At5g66140836746PAD2 (PROTEASOME ALPHA SUBUNIT D 2)Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.O.I.C.G.H.G.
85.599.9128.6At3g11270820298MEE34 (maternal effect embryo arrest 34)F:molecular_function unknown;P:embryonic development ending in seed dormancy, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPOO.I.C.G.H.G.
84.099.9236.3At5g40580834056PBB2Encodes 20S proteasome beta subunit PBB2 (PBB2).O.I.C.G.H.G.
83.099.9165.8At1g47250841128PAF2Encodes 20S proteasome subunit PAF2 (PAF2).O.I.C.G.H.G.
79.699.996.4At1g71000843439heat shock protein bindingF:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
71.899.943.5At5g01550831700LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1)Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.O.I.C.G.H.G.
68.699.9108.2At3g17611821028ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14)F:zinc ion binding;P:biological_process unknown;C:integral to membrane, intracellular;BOPMFAVO.I.C.G.H.G.
68.399.950.4At1g20350838623ATTIM17-1mitochondrial inner membrane translocaseO.I.C.G.H.G.
67.799.9214.2At1g7921084426220S proteasome alpha subunit B, putativeF:endopeptidase activity, threonine-type endopeptidase activity;P:defense response to bacterium, ubiquitin-dependent protein catabolic process;C:proteasome core complex;MFOPABO.I.C.G.H.G.
65.699.825.1At5g44390834465FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFOPMAO.I.C.G.H.G.
63.099.894.6At1g66090842923disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PBOMFO.I.C.G.H.G.
62.799.884.6At2g03430814872ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cell wall;MOFBPVAO.I.C.G.H.G.
60.699.860.4At4g37290829883unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
60.499.869.8At3g21280821682UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7)Encodes a ubiquitin-specific protease.O.I.C.G.H.G.
57.499.877.8At2g41040818703methyltransferase-relatedF:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFMO.I.C.G.H.G.
57.499.818.1At1g61610842457S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
56.999.883.6At5g41740834177disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAO.I.C.G.H.G.
56.799.832.5At1g24090839020RNase H domain-containing proteinF:ribonuclease H activity, nucleic acid binding;P:biological_process unknown;C:unknown;PBOAMO.I.C.G.H.G.
56.199.8123.4At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.O.I.C.G.H.G.
55.699.8130.9At1g74710843810isochorismate synthase 1 (ICS1) / isochorismate mutaseEncodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).O.I.C.G.H.G.
55.599.840.0At3g13100820498ATMRP7member of MRP subfamilyO.I.C.G.H.G.
55.499.8123.4At2g23270816859unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
54.399.8236.5At1g77440844080PBC2Encodes beta subunit of 20s proteosome complex which is involved in protein degradation.O.I.C.G.H.G.
52.399.828.9At5g16930831556AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;OMBFPAVO.I.C.G.H.G.
51.099.8150.5At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMO.I.C.G.H.G.
49.199.8181.8At1g43910840990AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
48.699.820.4At1g20180838607unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
47.799.8117.9At3g13235820522ubiquitin family proteinF:aspartic-type endopeptidase activity;P:response to cadmium ion;C:cytosol, nucleus;MPOFVBO.I.C.G.H.G.
47.699.827.4At5g12930831133unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABFO.I.C.G.H.G.
47.399.8267.3At1g16470838217PAB1 (PROTEASOME SUBUNIT PAB1)Encodes 20S proteasome subunit PAB1 (PAB1).O.I.C.G.H.G.
46.499.827.5At1g21240838719WAK3 (wall associated kinase 3)encodes a wall-associated kinaseO.I.C.G.H.G.
45.099.8220.2At5g19990832121RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)26S proteasome AAA-ATPase subunitO.I.C.G.H.G.
44.499.884.4At5g15870831444glycosyl hydrolase family 81 proteinF:hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity;P:response to cyclopentenone;C:unknown;FPOMVBO.I.C.G.H.G.
43.199.840.1At3g03060821146ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:cell wall, plant-type cell wall;OMBFPAVO.I.C.G.H.G.
40.799.8120.8At1g0481083940926S proteasome regulatory subunit, putativeF:enzyme regulator activity, binding;P:protein catabolic process, ubiquitin-dependent protein catabolic process;C:proteasome regulatory particle, base subcomplex, nucleus, plasma membrane;MFOPBAO.I.C.G.H.G.
40.599.8143.6At1g56060842057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
40.299.829.6At1g16420838212MC8 (METACASPASE 8)Encodes a metacaspase (cysteine-type endopeptidase) that is involved in promoting programmed cell death in response to hydrogen peroxide (H2O2), UV light, and methyl viologen (MV). Transcript levels rise in response to UV-C, H2O2, and MV. In vitro assays demonstrate that this enzyme has a preference for cleaving after an arginine residue, and it has a pH optimum of 8.0.O.I.C.G.H.G.
40.199.821.9At5g64060836527anac103 (Arabidopsis NAC domain containing protein 103)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
39.799.8401.2At4g14690827119ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)Encodes an early light-induced protein. ELIPs are thought not to be directly involved in the synthesis and assembly of specific photosynthetic complexes, but rather affect the biogenesis of all chlorophyll-binding complexes. A study (PMID 17553115) has shown that the chlorophyll synthesis pathway was downregulated as a result of constitutive ELIP2 expression, leading to decreased chlorophyll availability for the assembly of pigment-binding proteins for photosynthesis.O.I.C.G.H.G.
39.099.8248.3At3g14290820649PAE2Encodes 20S proteasome subunit PAE2 (PAE2).O.I.C.G.H.G.
38.099.8275.7At4g14800827135PBD2 (20S PROTEASOME BETA SUBUNIT 2)Encodes 20S proteasome beta subunit PBD2 (PBD2).O.I.C.G.H.G.
37.199.7176.6At2g20580816580RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A)encoding the RPN subunits of the 26S proteasomeO.I.C.G.H.G.
36.999.7262.6At5g56350835735pyruvate kinase, putativeF:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:cellular_component unknown;BOMPFAO.I.C.G.H.G.
36.999.797.4At1g07510837265ftsh10 (FtsH protease 10)encodes an FtsH protease that is localized to the mitochondrionO.I.C.G.H.G.
34.899.7250.5At3g51260824289PAD1 (20s proteasome alpha subunit pad1)20S proteosomal alpha subunits. Interacts with SnRK, SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase.O.I.C.G.H.G.
34.799.7164.2At5g45010834532ATDSS1(V) (Arabidopsis dss1 homolog on chromosome V)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
34.599.785.8At4g15420827213PRLI-interacting factor KF:peptidase activity, zinc ion binding;P:proteolysis, ubiquitin-dependent protein catabolic process;C:intracellular;MOFPBO.I.C.G.H.G.
34.399.7266.3At4g29040829025RPT2a (regulatory particle AAA-ATPase 2a)26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,O.I.C.G.H.G.
34.099.713.9At4g05370825885-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
32.399.739.1At1g51920841620unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
32.299.786.5At4g03320827972tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV)F:unknown;P:unknown;C:unknown;PBO.I.C.G.H.G.
32.299.737.5At4g04490825779protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
32.199.779.2At1g01940839309peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinF:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:cellular_component unknown;OBMFPAO.I.C.G.H.G.
32.199.753.7At4g20400827788transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family proteinF:transcription factor activity;P:regulation of transcription;C:nucleus;MFPOO.I.C.G.H.G.
32.099.750.3At3g10480820212no apical meristem (NAM) family proteinF:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;POMFBO.I.C.G.H.G.
31.699.742.8At1g23550838965SRO2 (SIMILAR TO RCD ONE 2)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.H.G.
31.299.7106.5At4g27585828868band 7 family proteinF:unknown;P:biological_process unknown;C:mitochondrion, plastid, membrane;BOMPAFVO.I.C.G.H.G.
31.299.761.0At3g53970824564proteasome inhibitor-relatedF:molecular_function unknown;P:unknown;C:unknown;MFOBPVAO.I.C.G.H.G.
30.999.7189.7At4g39670830121glycolipid binding / glycolipid transporterF:glycolipid transporter activity, glycolipid binding;P:glycolipid transport;C:cytoplasm;MPOFO.I.C.G.H.G.
30.999.792.8At3g22910821863calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVO.I.C.G.H.G.
30.699.7188.3At3g57090824876BIGYINEncodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.O.I.C.G.H.G.
30.099.7319.3At1g67250843045proteasome maturation factor UMP1 family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
30.099.7157.5At2g47000819314ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4)Multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above.O.I.C.G.H.G.
29.899.754.4At1g24140839026matrixin family proteinF:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAFO.I.C.G.H.G.
29.699.7263.0At5g2354083242026S proteasome regulatory subunit, putativeF:unknown;P:response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPOO.I.C.G.H.G.
28.799.757.0At5g25250832596-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAVO.I.C.G.H.G.
28.799.734.6At1g03440839504leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAO.I.C.G.H.G.
28.699.7115.0At1g57630842139disease resistance protein (TIR class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
28.199.7232.2At1g53850841822PAE1Encodes alpha5 subunit of 20s proteosome involved in protein degradation.O.I.C.G.H.G.
28.099.742.8At5g18270831945ANAC087F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
27.999.7284.3At1g21720838776PBC1 (PROTEASOME BETA SUBUNIT C1)20S proteasome beta subunit PBC1 truncated protein (PBC1)O.I.C.G.H.G.
27.799.7261.8At5g42790834290PAF1encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome)O.I.C.G.H.G.
27.099.796.0At1g32350840127AOX1D (alternative oxidase 1D)F:alternative oxidase activity;P:oxidation reduction, response to cyclopentenone;C:mitochondrial envelope, mitochondrion;OPFBMO.I.C.G.H.G.
26.899.7147.9At3g09350820091armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
26.899.771.4At2g26780817219bindingF:binding;P:biological_process unknown;C:membrane;MFPOO.I.C.G.H.G.
26.699.783.9At2g35980818171YLS9 (YELLOW-LEAF-SPECIFIC GENE 9)Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.O.I.C.G.H.G.
26.599.7235.2At5g02490831856heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2)F:ATP binding;P:protein folding, response to cadmium ion, response to heat, response to bacterium;C:cytosol, cell wall, plasma membrane;OBMFPVAO.I.C.G.H.G.
26.599.763.4At1g67970843125AT-HSFA8member of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
25.999.713.3At3g05790819748LON4 (LON PROTEASE 4)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.O.I.C.G.H.G.
25.799.742.2At3g25545822141unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
25.499.684.7At3g03890821082FMN bindingF:FMN binding;P:unknown;C:chloroplast;BOPMO.I.C.G.H.G.
25.399.641.1At3g15180820749proteasome-relatedF:binding;P:biological_process unknown;C:plasma membrane;MPOBO.I.C.G.H.G.
25.199.618.4At4g11170826718disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:response to ozone, defense response;C:mitochondrion;PMBOFAO.I.C.G.H.G.
24.699.620.4At5g43860834408ATCLH2Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.O.I.C.G.H.G.
24.499.617.5At5g61320836253CYP89A3member of CYP89AO.I.C.G.H.G.
24.399.679.6At5g26760832734unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FPMOBO.I.C.G.H.G.



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