Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-739-raw-cel-1099467375
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
210.1100.090.0At2g38340818414AP2 domain-containing transcription factor, putative (DRE2B)encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.O.I.C.G.H.G.
190.6100.044.5At5g39820833978anac094 (Arabidopsis NAC domain containing protein 94)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POMO.I.C.G.H.G.
156.499.940.0At1g49150841338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
133.099.9270.9At3g53230824489cell division cycle protein 48, putative / CDC48, putativeF:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAVO.I.C.G.H.G.
132.699.9140.6At5g20910832215zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:nucleus;PMOFVO.I.C.G.H.G.
104.199.950.4At1g31280840016AGO2 (argonaute 2)An Argonaute geneO.I.C.G.H.G.
92.799.990.4At5g05190830401unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVO.I.C.G.H.G.
86.699.995.6At2g41040818703methyltransferase-relatedF:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFMO.I.C.G.H.G.
79.499.9196.2At3g13330820533bindingF:binding;P:unknown;C:cellular_component unknown;FMOPO.I.C.G.H.G.
78.699.955.8At1g05880837098nucleic acid binding / protein binding / structural molecule/ zinc ion bindingF:protein binding, structural molecule activity, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:tight junction;MOPFO.I.C.G.H.G.
77.999.9164.4At3g28210822447PMZEncodes a putative zinc finger protein (PMZ).O.I.C.G.H.G.
76.699.9132.1At1g32940840188SBT3.5F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFMO.I.C.G.H.G.
76.599.994.6At1g71000843439heat shock protein bindingF:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
76.399.944.9At5g01550831700LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1)Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.O.I.C.G.H.G.
75.999.9117.5At1g09100837431RPT5B (26S proteasome AAA-ATPase subunit RPT5B)Encodes RPT5b (Regulatory Particle 5b), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.O.I.C.G.H.G.
63.699.8225.1At5g66140836746PAD2 (PROTEASOME ALPHA SUBUNIT D 2)Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.O.I.C.G.H.G.
63.699.8104.2At3g17611821028ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14)F:zinc ion binding;P:biological_process unknown;C:integral to membrane, intracellular;BOPMFAVO.I.C.G.H.G.
61.999.8143.3At1g47250841128PAF2Encodes 20S proteasome subunit PAF2 (PAF2).O.I.C.G.H.G.
57.399.895.9At5g15870831444glycosyl hydrolase family 81 proteinF:hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity;P:response to cyclopentenone;C:unknown;FPOMVBO.I.C.G.H.G.
55.499.8156.8At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMO.I.C.G.H.G.
54.699.879.0At2g03430814872ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cell wall;MOFBPVAO.I.C.G.H.G.
52.199.844.1At3g03060821146ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:cell wall, plant-type cell wall;OMBFPAVO.I.C.G.H.G.
51.999.8185.7At5g40580834056PBB2Encodes 20S proteasome beta subunit PBB2 (PBB2).O.I.C.G.H.G.
51.299.8186.3At1g7921084426220S proteasome alpha subunit B, putativeF:endopeptidase activity, threonine-type endopeptidase activity;P:defense response to bacterium, ubiquitin-dependent protein catabolic process;C:proteasome core complex;MFOPABO.I.C.G.H.G.
49.499.883.7At1g66090842923disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PBOMFO.I.C.G.H.G.
49.199.897.4At3g11270820298MEE34 (maternal effect embryo arrest 34)F:molecular_function unknown;P:embryonic development ending in seed dormancy, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPOO.I.C.G.H.G.
46.999.819.3At1g32950840189subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFMO.I.C.G.H.G.
45.999.8431.1At4g14690827119ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)Encodes an early light-induced protein. ELIPs are thought not to be directly involved in the synthesis and assembly of specific photosynthetic complexes, but rather affect the biogenesis of all chlorophyll-binding complexes. A study (PMID 17553115) has shown that the chlorophyll synthesis pathway was downregulated as a result of constitutive ELIP2 expression, leading to decreased chlorophyll availability for the assembly of pigment-binding proteins for photosynthesis.O.I.C.G.H.G.
45.599.8111.3At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.O.I.C.G.H.G.
44.699.840.7At1g20350838623ATTIM17-1mitochondrial inner membrane translocaseO.I.C.G.H.G.
41.499.8211.1At5g19990832121RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)26S proteasome AAA-ATPase subunitO.I.C.G.H.G.
41.399.8206.3At1g77440844080PBC2Encodes beta subunit of 20s proteosome complex which is involved in protein degradation.O.I.C.G.H.G.
41.199.857.6At3g21280821682UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7)Encodes a ubiquitin-specific protease.O.I.C.G.H.G.
39.799.8101.1At1g07510837265ftsh10 (FtsH protease 10)encodes an FtsH protease that is localized to the mitochondrionO.I.C.G.H.G.
38.899.814.9At1g61610842457S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
38.799.826.9At1g24090839020RNase H domain-containing proteinF:ribonuclease H activity, nucleic acid binding;P:biological_process unknown;C:unknown;PBOAMO.I.C.G.H.G.
37.799.7132.0At1g57630842139disease resistance protein (TIR class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
37.699.714.6At4g05370825885-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
37.199.747.3At4g37290829883unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
37.199.721.6At5g61320836253CYP89A3member of CYP89AO.I.C.G.H.G.
36.099.773.9At1g67970843125AT-HSFA8member of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
35.999.799.3At2g23270816859unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
35.699.720.8At5g46080834649protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
35.599.789.7At1g06830837195glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFOBO.I.C.G.H.G.
35.299.7101.4At3g13235820522ubiquitin family proteinF:aspartic-type endopeptidase activity;P:response to cadmium ion;C:cytosol, nucleus;MPOFVBO.I.C.G.H.G.
34.799.7153.0At1g43910840990AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
34.599.723.4At5g12930831133unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABFO.I.C.G.H.G.
33.999.7251.5At5g56350835735pyruvate kinase, putativeF:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:cellular_component unknown;BOMPFAO.I.C.G.H.G.
33.399.7286.9At5g42790834290PAF1encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome)O.I.C.G.H.G.
33.099.7129.5At1g56060842057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
32.999.7222.9At1g16470838217PAB1 (PROTEASOME SUBUNIT PAB1)Encodes 20S proteasome subunit PAB1 (PAB1).O.I.C.G.H.G.
32.999.783.9At4g15420827213PRLI-interacting factor KF:peptidase activity, zinc ion binding;P:proteolysis, ubiquitin-dependent protein catabolic process;C:intracellular;MOFPBO.I.C.G.H.G.
32.899.7166.0At2g20580816580RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A)encoding the RPN subunits of the 26S proteasomeO.I.C.G.H.G.
32.199.716.6At1g20180838607unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
32.099.7107.8At4g27585828868band 7 family proteinF:unknown;P:biological_process unknown;C:mitochondrion, plastid, membrane;BOMPAFVO.I.C.G.H.G.
31.399.785.2At4g03320827972tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV)F:unknown;P:unknown;C:unknown;PBO.I.C.G.H.G.
30.899.7105.0At1g0481083940926S proteasome regulatory subunit, putativeF:enzyme regulator activity, binding;P:protein catabolic process, ubiquitin-dependent protein catabolic process;C:proteasome regulatory particle, base subcomplex, nucleus, plasma membrane;MFOPBAO.I.C.G.H.G.
30.199.754.7At1g24140839026matrixin family proteinF:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAFO.I.C.G.H.G.
30.199.721.9At5g16930831556AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;OMBFPAVO.I.C.G.H.G.
29.299.7245.8At4g29040829025RPT2a (regulatory particle AAA-ATPase 2a)26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,O.I.C.G.H.G.
29.299.7241.7At4g14800827135PBD2 (20S PROTEASOME BETA SUBUNIT 2)Encodes 20S proteasome beta subunit PBD2 (PBD2).O.I.C.G.H.G.
29.299.7150.5At5g45010834532ATDSS1(V) (Arabidopsis dss1 homolog on chromosome V)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
28.699.7182.0At3g57090824876BIGYINEncodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.O.I.C.G.H.G.
28.599.734.4At1g03440839504leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAO.I.C.G.H.G.
28.199.718.3At5g64060836527anac103 (Arabidopsis NAC domain containing protein 103)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
27.799.716.3At5g44390834465FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFOPMAO.I.C.G.H.G.
27.399.791.8At1g74710843810isochorismate synthase 1 (ICS1) / isochorismate mutaseEncodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).O.I.C.G.H.G.
27.399.772.0At2g26780817219bindingF:binding;P:biological_process unknown;C:membrane;MFPOO.I.C.G.H.G.
27.299.772.9At1g01940839309peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinF:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:cellular_component unknown;OBMFPAO.I.C.G.H.G.
27.199.7251.8At5g2354083242026S proteasome regulatory subunit, putativeF:unknown;P:response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPOO.I.C.G.H.G.
27.199.7207.0At3g14290820649PAE2Encodes 20S proteasome subunit PAE2 (PAE2).O.I.C.G.H.G.
26.899.720.9At1g21240838719WAK3 (wall associated kinase 3)encodes a wall-associated kinaseO.I.C.G.H.G.
26.799.7226.1At1g53850841822PAE1Encodes alpha5 subunit of 20s proteosome involved in protein degradation.O.I.C.G.H.G.
26.799.746.0At3g10480820212no apical meristem (NAM) family proteinF:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;POMFBO.I.C.G.H.G.
26.799.730.6At2g40340818627AP2 domain-containing transcription factor, putative (DRE2B)encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.O.I.C.G.H.G.
26.399.7234.4At5g02490831856heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2)F:ATP binding;P:protein folding, response to cadmium ion, response to heat, response to bacterium;C:cytosol, cell wall, plasma membrane;OBMFPVAO.I.C.G.H.G.
26.299.719.9At4g36580829810AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:chloroplast;OBMFPAVO.I.C.G.H.G.
26.199.7217.0At3g51260824289PAD1 (20s proteasome alpha subunit pad1)20S proteosomal alpha subunits. Interacts with SnRK, SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase.O.I.C.G.H.G.
25.699.7262.5At5g52640835341ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.O.I.C.G.H.G.
25.599.7144.3At3g09350820091armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
25.399.6293.6At2g36460818220fructose-bisphosphate aldolase, putativeF:fructose-bisphosphate aldolase activity, catalytic activity;P:response to cadmium ion, response to salt stress, pentose-phosphate shunt;C:mitochondrion, plasma membrane, membrane;OMBPFO.I.C.G.H.G.
25.299.638.3At1g23550838965SRO2 (SIMILAR TO RCD ONE 2)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.H.G.
25.199.683.7At3g22910821863calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVO.I.C.G.H.G.
25.099.629.5At4g23040828403UBX domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol;MOFBPVAO.I.C.G.H.G.
24.999.6290.6At1g67250843045proteasome maturation factor UMP1 family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
23.899.654.1At5g41740834177disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAO.I.C.G.H.G.
23.799.653.3At3g53970824564proteasome inhibitor-relatedF:molecular_function unknown;P:unknown;C:unknown;MFOBPVAO.I.C.G.H.G.
23.499.645.8At4g20400827788transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family proteinF:transcription factor activity;P:regulation of transcription;C:nucleus;MFPOO.I.C.G.H.G.
23.099.626.9At5g58210835933hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMFBPVAO.I.C.G.H.G.
22.899.6307.6At2g27020817244PAG1Encodes 20S proteasome subunit PAG1 (PAG1).O.I.C.G.H.G.
22.899.639.7At3g25545822141unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
22.599.6136.3At2g47000819314ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4)Multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above.O.I.C.G.H.G.
22.399.666.2At4g03430827925EMB2770 (EMBRYO DEFECTIVE 2770)Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.O.I.C.G.H.G.
22.099.638.3At3g15180820749proteasome-relatedF:binding;P:biological_process unknown;C:plasma membrane;MPOBO.I.C.G.H.G.
21.599.661.3At1g18660838447zinc finger (C3HC4-type RING finger) family proteinF:protein binding, ATP-dependent peptidase activity, binding, zinc ion binding;P:ATP-dependent proteolysis;C:unknown;MOPFBVAO.I.C.G.H.G.
21.499.666.2At2g18680816383unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
21.299.6301.4At1g29150839789ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.O.I.C.G.H.G.
21.299.6247.8At1g21720838776PBC1 (PROTEASOME BETA SUBUNIT C1)20S proteasome beta subunit PBC1 truncated protein (PBC1)O.I.C.G.H.G.
21.199.673.3At1g215253766777-pseudogene of unknown proteinO.I.C.G.H.G.
21.199.630.4At4g04490825779protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.



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