CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-739-raw-cel-1099467339

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
234.8 100.0 96.5 At1g05880 837098 nucleic acid binding / protein binding / structural molecule/ zinc ion binding F:protein binding, structural molecule activity, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:tight junction;MOPF O.I. C.G. H.G.
208.0 100.0 46.1 At1g49150 841338 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
149.2 99.9 49.4 At1g21240 838719 WAK3 (wall associated kinase 3) encodes a wall-associated kinase O.I. C.G. H.G.
126.5 99.9 69.8 At2g38340 818414 AP2 domain-containing transcription factor, putative (DRE2B) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. O.I. C.G. H.G.
122.5 99.9 167.0 At1g32940 840188 SBT3.5 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFM O.I. C.G. H.G.
113.6 99.9 91.2 At1g26390 839181 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM O.I. C.G. H.G.
103.7 99.9 44.0 At1g24090 839020 RNase H domain-containing protein F:ribonuclease H activity, nucleic acid binding;P:biological_process unknown;C:unknown;PBOAM O.I. C.G. H.G.
102.1 99.9 82.2 At1g78410 844177 VQ motif-containing protein F:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P O.I. C.G. H.G.
78.0 99.9 107.8 At5g20910 832215 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:nucleus;PMOFV O.I. C.G. H.G.
74.3 99.9 66.9 At4g37290 829883 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
70.5 99.9 152.8 At1g47250 841128 PAF2 Encodes 20S proteasome subunit PAF2 (PAF2). O.I. C.G. H.G.
70.1 99.9 155.9 At3g28210 822447 PMZ Encodes a putative zinc finger protein (PMZ). O.I. C.G. H.G.
70.0 99.9 47.9 At2g04430 814983 atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5) F:hydrolase activity;P:unknown;C:cytosol;BOMPAFV O.I. C.G. H.G.
69.6 99.9 22.4 At5g09470 830806 mitochondrial substrate carrier family protein F:oxidative phosphorylation uncoupler activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOV O.I. C.G. H.G.
68.6 99.9 122.6 At1g35230 840412 AGP5 (ARABINOGALACTAN-PROTEIN 5) Encodes arabinogalactan-protein (AGP5). O.I. C.G. H.G.
68.3 99.9 25.6 At5g44390 834465 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFOPMA O.I. C.G. H.G.
63.8 99.8 192.5 At4g23140 828413 CRK6 (CYSTEINE-RICH RLK 6) Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) O.I. C.G. H.G.
60.4 99.8 201.7 At1g43910 840990 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
57.7 99.8 39.0 At5g01550 831700 LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1) Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. O.I. C.G. H.G.
56.8 99.8 51.9 At1g51920 841620 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
55.9 99.8 45.6 At1g20350 838623 ATTIM17-1 mitochondrial inner membrane translocase O.I. C.G. H.G.
54.9 99.8 13.0 At4g30230 829146 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
53.8 99.8 172.4 At3g53230 824489 cell division cycle protein 48, putative / CDC48, putative F:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAV O.I. C.G. H.G.
50.1 99.8 75.6 At2g03430 814872 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cell wall;MOFBPVA O.I. C.G. H.G.
48.7 99.8 129.0 At1g32350 840127 AOX1D (alternative oxidase 1D) F:alternative oxidase activity;P:oxidation reduction, response to cyclopentenone;C:mitochondrial envelope, mitochondrion;OPFBM O.I. C.G. H.G.
48.6 99.8 74.4 At4g23150 828414 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
46.9 99.8 193.2 At5g66140 836746 PAD2 (PROTEASOME ALPHA SUBUNIT D 2) Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. O.I. C.G. H.G.
45.7 99.8 12.8 At2g23830 816915 vesicle-associated membrane protein, putative / VAMP, putative F:structural molecule activity;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
44.1 99.8 171.2 At5g40580 834056 PBB2 Encodes 20S proteasome beta subunit PBB2 (PBB2). O.I. C.G. H.G.
43.8 99.8 62.1 At5g05190 830401 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPV O.I. C.G. H.G.
43.8 99.8 21.3 At5g39820 833978 anac094 (Arabidopsis NAC domain containing protein 94) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POM O.I. C.G. H.G.
43.2 99.8 183.3 At5g45010 834532 ATDSS1(V) (Arabidopsis dss1 homolog on chromosome V) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
41.2 99.8 34.9 At1g72240 843556 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
40.3 99.8 220.7 At2g18660 816381 EXLB3 (EXPANSIN-LIKE B3 PRECURSOR) Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. O.I. C.G. H.G.
39.6 99.8 84.9 At1g09100 837431 RPT5B (26S proteasome AAA-ATPase subunit RPT5B) Encodes RPT5b (Regulatory Particle 5b), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype. O.I. C.G. H.G.
39.5 99.8 66.8 At1g33960 840293 AIG1 (AVRRPT2-INDUCED GENE 1) Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 O.I. C.G. H.G.
39.0 99.8 68.9 At1g74590 843799 GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
38.5 99.8 199.2 At1g77440 844080 PBC2 Encodes beta subunit of 20s proteosome complex which is involved in protein degradation. O.I. C.G. H.G.
38.5 99.8 133.4 At1g57630 842139 disease resistance protein (TIR class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P O.I. C.G. H.G.
38.5 99.8 76.4 At1g67970 843125 AT-HSFA8 member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
37.3 99.7 355.9 At1g67250 843045 proteasome maturation factor UMP1 family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
36.4 99.7 157.2 At1g79210 844262 20S proteasome alpha subunit B, putative F:endopeptidase activity, threonine-type endopeptidase activity;P:defense response to bacterium, ubiquitin-dependent protein catabolic process;C:proteasome core complex;MFOPAB O.I. C.G. H.G.
36.4 99.7 47.1 At5g64000 836521 SAL2 3'(2'),5'-bisphosphate nucleotidase O.I. C.G. H.G.
35.5 99.7 114.2 At2g30770 817628 CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13) putative cytochrome P450 O.I. C.G. H.G.
35.4 99.7 41.9 At3g53150 824481 UGT73D1 (UDP-glucosyl transferase 73D1) F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF O.I. C.G. H.G.
35.1 99.7 130.5 At3g13330 820533 binding F:binding;P:unknown;C:cellular_component unknown;FMOP O.I. C.G. H.G.
35.0 99.7 54.9 At4g03450 827913 ankyrin repeat family protein F:protein binding;P:unknown;C:unknown;MOPFBVA O.I. C.G. H.G.
34.9 99.7 83.9 At5g38900 833882 DSBA oxidoreductase family protein F:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMA O.I. C.G. H.G.
34.9 99.7 30.9 At1g62840 842584 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
34.8 99.7 143.6 At3g47540 823908 chitinase, putative F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
34.7 99.7 16.2 At5g40990 834101 GLIP1 (GDSL LIPASE1) Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. O.I. C.G. H.G.
34.5 99.7 228.2 At1g16470 838217 PAB1 (PROTEASOME SUBUNIT PAB1) Encodes 20S proteasome subunit PAB1 (PAB1). O.I. C.G. H.G.
33.4 99.7 80.4 At3g11270 820298 MEE34 (maternal effect embryo arrest 34) F:molecular_function unknown;P:embryonic development ending in seed dormancy, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPO O.I. C.G. H.G.
33.2 99.7 95.1 At2g21640 816702 - Encodes a protein of unknown function that is a marker for oxidative stress response. O.I. C.G. H.G.
32.3 99.7 110.2 At4g10500 826642 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM O.I. C.G. H.G.
32.1 99.7 96.7 At3g13235 820522 ubiquitin family protein F:aspartic-type endopeptidase activity;P:response to cadmium ion;C:cytosol, nucleus;MPOFVB O.I. C.G. H.G.
32.0 99.7 87.0 At5g52810 835358 ornithine cyclodeaminase/mu-crystallin family protein F:structural constituent of eye lens, binding, catalytic activity;P:arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process;C:chloroplast;BOMAFP O.I. C.G. H.G.
31.9 99.7 30.3 At3g13100 820498 ATMRP7 member of MRP subfamily O.I. C.G. H.G.
31.8 99.7 282.0 At2g43570 818959 chitinase, putative F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMV O.I. C.G. H.G.
30.7 99.7 158.6 At2g30550 817604 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;PFOBMV O.I. C.G. H.G.
30.7 99.7 125.0 At1g56060 842057 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
30.0 99.7 19.1 At5g46080 834649 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
30.0 99.7 9.8 At1g33950 840292 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:unknown;MOPBFV O.I. C.G. H.G.
28.5 99.7 41.4 At1g77810 844443 galactosyltransferase family protein F:transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity;P:protein amino acid glycosylation;C:Golgi apparatus;MPOB O.I. C.G. H.G.
28.4 99.7 30.0 At1g33720 840263 CYP76C6 member of CYP76C O.I. C.G. H.G.
28.3 99.7 64.5 At5g51740 835248 peptidase M48 family protein F:metalloendopeptidase activity;P:proteolysis;C:membrane;BOFMPA O.I. C.G. H.G.
28.1 99.7 93.0 At1g74710 843810 isochorismate synthase 1 (ICS1) / isochorismate mutase Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870). O.I. C.G. H.G.
27.2 99.7 237.1 At4g29040 829025 RPT2a (regulatory particle AAA-ATPase 2a) 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA, O.I. C.G. H.G.
26.9 99.7 258.0 At5g42790 834290 PAF1 encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome) O.I. C.G. H.G.
26.7 99.7 223.3 At5g56350 835735 pyruvate kinase, putative F:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:cellular_component unknown;BOMPFA O.I. C.G. H.G.
26.4 99.7 230.0 At4g14800 827135 PBD2 (20S PROTEASOME BETA SUBUNIT 2) Encodes 20S proteasome beta subunit PBD2 (PBD2). O.I. C.G. H.G.
26.4 99.7 48.5 At3g48650 3769688 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
26.4 99.7 38.6 At4g04500 825780 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
25.5 99.7 45.4 At3g21280 821682 UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7) Encodes a ubiquitin-specific protease. O.I. C.G. H.G.
25.4 99.6 165.3 At5g19990 832121 RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) 26S proteasome AAA-ATPase subunit O.I. C.G. H.G.
25.3 99.6 83.4 At2g23270 816859 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
25.0 99.6 159.5 At3g26830 822298 PAD3 (PHYTOALEXIN DEFICIENT 3) Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin. O.I. C.G. H.G.
24.7 99.6 21.9 At1g69790 843315 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA O.I. C.G. H.G.
24.6 99.6 75.6 At4g03320 827972 tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV) F:unknown;P:unknown;C:unknown;PB O.I. C.G. H.G.
24.2 99.6 70.1 At4g11890 826796 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
24.2 99.6 52.4 At5g25250 832596 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV O.I. C.G. H.G.
24.1 99.6 48.9 At1g24140 839026 matrixin family protein F:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAF O.I. C.G. H.G.
23.9 99.6 236.5 At5g23540 832420 26S proteasome regulatory subunit, putative F:unknown;P:response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPO O.I. C.G. H.G.
23.9 99.6 32.3 At4g04490 825779 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
23.8 99.6 69.8 At2g18680 816383 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO O.I. C.G. H.G.
23.8 99.6 53.3 At3g53970 824564 proteasome inhibitor-related F:molecular_function unknown;P:unknown;C:unknown;MFOBPVA O.I. C.G. H.G.
23.3 99.6 29.5 At3g03060 821146 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:cell wall, plant-type cell wall;OMBFPAV O.I. C.G. H.G.
23.0 99.6 87.7 At5g13800 831225 hydrolase, alpha/beta fold family protein F:hydrolase activity, pheophytinase activity;P:chlorophyll catabolic process;C:chloroplast;BOPMAF O.I. C.G. H.G.
22.9 99.6 251.9 At4g14365 827080 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA O.I. C.G. H.G.
22.8 99.6 55.1 At1g51890 841616 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
22.7 99.6 45.4 At1g03660 839033 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
22.6 99.6 208.1 At1g53850 841822 PAE1 Encodes alpha5 subunit of 20s proteosome involved in protein degradation. O.I. C.G. H.G.
22.5 99.6 89.8 At1g04810 839409 26S proteasome regulatory subunit, putative F:enzyme regulator activity, binding;P:protein catabolic process, ubiquitin-dependent protein catabolic process;C:proteasome regulatory particle, base subcomplex, nucleus, plasma membrane;MFOPBA O.I. C.G. H.G.
22.5 99.6 31.6 At4g13900 3770199 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
22.2 99.6 76.6 At2g35980 818171 YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast. O.I. C.G. H.G.
22.1 99.6 18.7 At5g12930 831133 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABF O.I. C.G. H.G.
22.0 99.6 74.9 At1g21525 3766777 - pseudogene of unknown protein O.I. C.G. H.G.
22.0 99.6 9.8 At1g47890 841206 AtRLP7 (Receptor Like Protein 7) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAV O.I. C.G. H.G.
21.8 99.6 34.5 At3g25010 822092 AtRLP41 (Receptor Like Protein 41) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
21.6 99.6 69.8 At4g26270 828733 PFK3 (PHOSPHOFRUCTOKINASE 3) F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex;BOMFPAV O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
234.8	100.0	96.5	At1g05880	837098	nucleic acid binding / protein binding / structural molecule/ zinc ion binding	F:protein binding, structural molecule activity, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:tight junction;MOPF	O.I.	C.G.	H.G.
208.0	100.0	46.1	At1g49150	841338	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
149.2	99.9	49.4	At1g21240	838719	WAK3 (wall associated kinase 3)	encodes a wall-associated kinase	O.I.	C.G.	H.G.
126.5	99.9	69.8	At2g38340	818414	AP2 domain-containing transcription factor, putative (DRE2B)	encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.	O.I.	C.G.	H.G.
122.5	99.9	167.0	At1g32940	840188	SBT3.5	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFM	O.I.	C.G.	H.G.
113.6	99.9	91.2	At1g26390	839181	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM	O.I.	C.G.	H.G.
103.7	99.9	44.0	At1g24090	839020	RNase H domain-containing protein	F:ribonuclease H activity, nucleic acid binding;P:biological_process unknown;C:unknown;PBOAM	O.I.	C.G.	H.G.
102.1	99.9	82.2	At1g78410	844177	VQ motif-containing protein	F:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P	O.I.	C.G.	H.G.
78.0	99.9	107.8	At5g20910	832215	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:nucleus;PMOFV	O.I.	C.G.	H.G.
74.3	99.9	66.9	At4g37290	829883	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
70.5	99.9	152.8	At1g47250	841128	PAF2	Encodes 20S proteasome subunit PAF2 (PAF2).	O.I.	C.G.	H.G.
70.1	99.9	155.9	At3g28210	822447	PMZ	Encodes a putative zinc finger protein (PMZ).	O.I.	C.G.	H.G.
70.0	99.9	47.9	At2g04430	814983	atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5)	F:hydrolase activity;P:unknown;C:cytosol;BOMPAFV	O.I.	C.G.	H.G.
69.6	99.9	22.4	At5g09470	830806	mitochondrial substrate carrier family protein	F:oxidative phosphorylation uncoupler activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOV	O.I.	C.G.	H.G.
68.6	99.9	122.6	At1g35230	840412	AGP5 (ARABINOGALACTAN-PROTEIN 5)	Encodes arabinogalactan-protein (AGP5).	O.I.	C.G.	H.G.
68.3	99.9	25.6	At5g44390	834465	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFOPMA	O.I.	C.G.	H.G.
63.8	99.8	192.5	At4g23140	828413	CRK6 (CYSTEINE-RICH RLK 6)	Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)	O.I.	C.G.	H.G.
60.4	99.8	201.7	At1g43910	840990	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
57.7	99.8	39.0	At5g01550	831700	LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1)	Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.	O.I.	C.G.	H.G.
56.8	99.8	51.9	At1g51920	841620	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
55.9	99.8	45.6	At1g20350	838623	ATTIM17-1	mitochondrial inner membrane translocase	O.I.	C.G.	H.G.
54.9	99.8	13.0	At4g30230	829146	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
53.8	99.8	172.4	At3g53230	824489	cell division cycle protein 48, putative / CDC48, putative	F:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAV	O.I.	C.G.	H.G.
50.1	99.8	75.6	At2g03430	814872	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cell wall;MOFBPVA	O.I.	C.G.	H.G.
48.7	99.8	129.0	At1g32350	840127	AOX1D (alternative oxidase 1D)	F:alternative oxidase activity;P:oxidation reduction, response to cyclopentenone;C:mitochondrial envelope, mitochondrion;OPFBM	O.I.	C.G.	H.G.
48.6	99.8	74.4	At4g23150	828414	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
46.9	99.8	193.2	At5g66140	836746	PAD2 (PROTEASOME ALPHA SUBUNIT D 2)	Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.	O.I.	C.G.	H.G.
45.7	99.8	12.8	At2g23830	816915	vesicle-associated membrane protein, putative / VAMP, putative	F:structural molecule activity;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
44.1	99.8	171.2	At5g40580	834056	PBB2	Encodes 20S proteasome beta subunit PBB2 (PBB2).	O.I.	C.G.	H.G.
43.8	99.8	62.1	At5g05190	830401	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPV	O.I.	C.G.	H.G.
43.8	99.8	21.3	At5g39820	833978	anac094 (Arabidopsis NAC domain containing protein 94)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
43.2	99.8	183.3	At5g45010	834532	ATDSS1(V) (Arabidopsis dss1 homolog on chromosome V)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
41.2	99.8	34.9	At1g72240	843556	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
40.3	99.8	220.7	At2g18660	816381	EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)	Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.	O.I.	C.G.	H.G.
39.6	99.8	84.9	At1g09100	837431	RPT5B (26S proteasome AAA-ATPase subunit RPT5B)	Encodes RPT5b (Regulatory Particle 5b), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.	O.I.	C.G.	H.G.
39.5	99.8	66.8	At1g33960	840293	AIG1 (AVRRPT2-INDUCED GENE 1)	Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2	O.I.	C.G.	H.G.
39.0	99.8	68.9	At1g74590	843799	GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
38.5	99.8	199.2	At1g77440	844080	PBC2	Encodes beta subunit of 20s proteosome complex which is involved in protein degradation.	O.I.	C.G.	H.G.
38.5	99.8	133.4	At1g57630	842139	disease resistance protein (TIR class), putative	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P	O.I.	C.G.	H.G.
38.5	99.8	76.4	At1g67970	843125	AT-HSFA8	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
37.3	99.7	355.9	At1g67250	843045	proteasome maturation factor UMP1 family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
36.4	99.7	157.2	At1g79210	844262	20S proteasome alpha subunit B, putative	F:endopeptidase activity, threonine-type endopeptidase activity;P:defense response to bacterium, ubiquitin-dependent protein catabolic process;C:proteasome core complex;MFOPAB	O.I.	C.G.	H.G.
36.4	99.7	47.1	At5g64000	836521	SAL2	3'(2'),5'-bisphosphate nucleotidase	O.I.	C.G.	H.G.
35.5	99.7	114.2	At2g30770	817628	CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13)	putative cytochrome P450	O.I.	C.G.	H.G.
35.4	99.7	41.9	At3g53150	824481	UGT73D1 (UDP-glucosyl transferase 73D1)	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF	O.I.	C.G.	H.G.
35.1	99.7	130.5	At3g13330	820533	binding	F:binding;P:unknown;C:cellular_component unknown;FMOP	O.I.	C.G.	H.G.
35.0	99.7	54.9	At4g03450	827913	ankyrin repeat family protein	F:protein binding;P:unknown;C:unknown;MOPFBVA	O.I.	C.G.	H.G.
34.9	99.7	83.9	At5g38900	833882	DSBA oxidoreductase family protein	F:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMA	O.I.	C.G.	H.G.
34.9	99.7	30.9	At1g62840	842584	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
34.8	99.7	143.6	At3g47540	823908	chitinase, putative	F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
34.7	99.7	16.2	At5g40990	834101	GLIP1 (GDSL LIPASE1)	Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.	O.I.	C.G.	H.G.
34.5	99.7	228.2	At1g16470	838217	PAB1 (PROTEASOME SUBUNIT PAB1)	Encodes 20S proteasome subunit PAB1 (PAB1).	O.I.	C.G.	H.G.
33.4	99.7	80.4	At3g11270	820298	MEE34 (maternal effect embryo arrest 34)	F:molecular_function unknown;P:embryonic development ending in seed dormancy, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPO	O.I.	C.G.	H.G.
33.2	99.7	95.1	At2g21640	816702	-	Encodes a protein of unknown function that is a marker for oxidative stress response.	O.I.	C.G.	H.G.
32.3	99.7	110.2	At4g10500	826642	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM	O.I.	C.G.	H.G.
32.1	99.7	96.7	At3g13235	820522	ubiquitin family protein	F:aspartic-type endopeptidase activity;P:response to cadmium ion;C:cytosol, nucleus;MPOFVB	O.I.	C.G.	H.G.
32.0	99.7	87.0	At5g52810	835358	ornithine cyclodeaminase/mu-crystallin family protein	F:structural constituent of eye lens, binding, catalytic activity;P:arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process;C:chloroplast;BOMAFP	O.I.	C.G.	H.G.
31.9	99.7	30.3	At3g13100	820498	ATMRP7	member of MRP subfamily	O.I.	C.G.	H.G.
31.8	99.7	282.0	At2g43570	818959	chitinase, putative	F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMV	O.I.	C.G.	H.G.
30.7	99.7	158.6	At2g30550	817604	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;PFOBMV	O.I.	C.G.	H.G.
30.7	99.7	125.0	At1g56060	842057	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
30.0	99.7	19.1	At5g46080	834649	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
30.0	99.7	9.8	At1g33950	840292	avirulence-responsive family protein / avirulence induced gene (AIG1) family protein	F:GTP binding;P:response to bacterium;C:unknown;MOPBFV	O.I.	C.G.	H.G.
28.5	99.7	41.4	At1g77810	844443	galactosyltransferase family protein	F:transferase activity, transferring glycosyl groups, beta-1,3-galactosyltransferase activity;P:protein amino acid glycosylation;C:Golgi apparatus;MPOB	O.I.	C.G.	H.G.
28.4	99.7	30.0	At1g33720	840263	CYP76C6	member of CYP76C	O.I.	C.G.	H.G.
28.3	99.7	64.5	At5g51740	835248	peptidase M48 family protein	F:metalloendopeptidase activity;P:proteolysis;C:membrane;BOFMPA	O.I.	C.G.	H.G.
28.1	99.7	93.0	At1g74710	843810	isochorismate synthase 1 (ICS1) / isochorismate mutase	Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).	O.I.	C.G.	H.G.
27.2	99.7	237.1	At4g29040	829025	RPT2a (regulatory particle AAA-ATPase 2a)	26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,	O.I.	C.G.	H.G.
26.9	99.7	258.0	At5g42790	834290	PAF1	encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome)	O.I.	C.G.	H.G.
26.7	99.7	223.3	At5g56350	835735	pyruvate kinase, putative	F:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:cellular_component unknown;BOMPFA	O.I.	C.G.	H.G.
26.4	99.7	230.0	At4g14800	827135	PBD2 (20S PROTEASOME BETA SUBUNIT 2)	Encodes 20S proteasome beta subunit PBD2 (PBD2).	O.I.	C.G.	H.G.
26.4	99.7	48.5	At3g48650	3769688	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
26.4	99.7	38.6	At4g04500	825780	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
25.5	99.7	45.4	At3g21280	821682	UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7)	Encodes a ubiquitin-specific protease.	O.I.	C.G.	H.G.
25.4	99.6	165.3	At5g19990	832121	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	26S proteasome AAA-ATPase subunit	O.I.	C.G.	H.G.
25.3	99.6	83.4	At2g23270	816859	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
25.0	99.6	159.5	At3g26830	822298	PAD3 (PHYTOALEXIN DEFICIENT 3)	Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.	O.I.	C.G.	H.G.
24.7	99.6	21.9	At1g69790	843315	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA	O.I.	C.G.	H.G.
24.6	99.6	75.6	At4g03320	827972	tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV)	F:unknown;P:unknown;C:unknown;PB	O.I.	C.G.	H.G.
24.2	99.6	70.1	At4g11890	826796	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
24.2	99.6	52.4	At5g25250	832596	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV	O.I.	C.G.	H.G.
24.1	99.6	48.9	At1g24140	839026	matrixin family protein	F:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAF	O.I.	C.G.	H.G.
23.9	99.6	236.5	At5g23540	832420	26S proteasome regulatory subunit, putative	F:unknown;P:response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPO	O.I.	C.G.	H.G.
23.9	99.6	32.3	At4g04490	825779	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
23.8	99.6	69.8	At2g18680	816383	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO	O.I.	C.G.	H.G.
23.8	99.6	53.3	At3g53970	824564	proteasome inhibitor-related	F:molecular_function unknown;P:unknown;C:unknown;MFOBPVA	O.I.	C.G.	H.G.
23.3	99.6	29.5	At3g03060	821146	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:cell wall, plant-type cell wall;OMBFPAV	O.I.	C.G.	H.G.
23.0	99.6	87.7	At5g13800	831225	hydrolase, alpha/beta fold family protein	F:hydrolase activity, pheophytinase activity;P:chlorophyll catabolic process;C:chloroplast;BOPMAF	O.I.	C.G.	H.G.
22.9	99.6	251.9	At4g14365	827080	zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
22.8	99.6	55.1	At1g51890	841616	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
22.7	99.6	45.4	At1g03660	839033	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
22.6	99.6	208.1	At1g53850	841822	PAE1	Encodes alpha5 subunit of 20s proteosome involved in protein degradation.	O.I.	C.G.	H.G.
22.5	99.6	89.8	At1g04810	839409	26S proteasome regulatory subunit, putative	F:enzyme regulator activity, binding;P:protein catabolic process, ubiquitin-dependent protein catabolic process;C:proteasome regulatory particle, base subcomplex, nucleus, plasma membrane;MFOPBA	O.I.	C.G.	H.G.
22.5	99.6	31.6	At4g13900	3770199	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
22.2	99.6	76.6	At2g35980	818171	YLS9 (YELLOW-LEAF-SPECIFIC GENE 9)	Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.	O.I.	C.G.	H.G.
22.1	99.6	18.7	At5g12930	831133	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABF	O.I.	C.G.	H.G.
22.0	99.6	74.9	At1g21525	3766777	-	pseudogene of unknown protein	O.I.	C.G.	H.G.
22.0	99.6	9.8	At1g47890	841206	AtRLP7 (Receptor Like Protein 7)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAV	O.I.	C.G.	H.G.
21.8	99.6	34.5	At3g25010	822092	AtRLP41 (Receptor Like Protein 41)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
21.6	99.6	69.8	At4g26270	828733	PFK3 (PHOSPHOFRUCTOKINASE 3)	F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex;BOMFPAV	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-739-raw-cel-1099467339
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-739-raw-cel-1099467339 GSE experiment -

GSM ID -

Assay name E-MEXP-739-raw-cel-1099467339

GSE experiment -