CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-728-raw-cel-1062074653

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
83.4 99.9 29.2 At3g59270 825096 syntaxin-related family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
59.3 99.8 403.3 At4g22490 828344 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
47.4 99.8 29.2 At5g50010 835065 transcription factor/ transcription regulator F:transcription factor activity, transcription regulator activity;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
44.0 99.8 10.7 At1g05370 837038 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FPMO O.I. C.G. H.G.
40.7 99.8 19.1 At5g42230 834228 scpl41 (serine carboxypeptidase-like 41) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
39.8 99.8 329.8 At1g62500 842547 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;MBPOFVA O.I. C.G. H.G.
39.2 99.8 117.4 At4g37750 829931 ANT (AINTEGUMENTA) ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia. O.I. C.G. H.G.
37.6 99.7 17.7 At1g11730 837717 galactosyltransferase family protein F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;MPO O.I. C.G. H.G.
37.4 99.7 40.9 At5g64110 836532 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:membrane;PFOB O.I. C.G. H.G.
36.0 99.7 86.5 At3g23290 821908 - - O.I. C.G. H.G.
35.7 99.7 65.0 At1g02800 839385 ATCEL2 Encodes a protein with similarity to endo-1,4-b-glucanases and is a member of Glycoside Hydrolase Family 9. CEL2 is induced by nemotodes and is expressed in syncitia induced by Heterodera schachtii.May be involved in the development and function of syncitia. O.I. C.G. H.G.
33.2 99.7 212.0 At4g03060 828102 AOP2 (ALKENYL HYDROXALKYL PRODUCING 2) Encodes a truncated and null function protein, due to a 5-bp deletion in cDNA. The functional allele in ecotype Cvi, AOP2, encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of alkenyl glucosinolate among different ecotypes of Arabidopsis. O.I. C.G. H.G.
32.4 99.7 14.3 At5g03790 831723 HB51 Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation. O.I. C.G. H.G.
32.3 99.7 226.8 At5g08000 830694 E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose. O.I. C.G. H.G.
32.1 99.7 23.7 At1g68640 843194 PAN (PERIANTHIA) Encodes bZIP-transcription factor. Mutant plants have extra floral organs. O.I. C.G. H.G.
31.9 99.7 62.0 At3g55510 824716 RBL (REBELOTE) F:unknown;P:floral meristem determinacy;C:nucleus;MFOP O.I. C.G. H.G.
31.8 99.7 44.6 At5g03440 831839 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
29.7 99.7 15.4 At1g13400 837900 NUB (NUBBIN) Along with JAG, it is involved in stamen and carpel development. Expression is limited to the adaxial side of lateral organs. Activated by AGAMOUS in a cal-1, ap1-1 background. O.I. C.G. H.G.
29.1 99.7 84.8 At2g45190 819127 AFO (ABNORMAL FLORAL ORGANS) Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS). O.I. C.G. H.G.
28.9 99.7 45.7 At4g32980 829435 ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1) Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM. O.I. C.G. H.G.
27.3 99.7 67.7 At1g27570 839648 phosphatidylinositol 3- and 4-kinase family protein F:inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
26.0 99.7 18.7 At1g55200 841963 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
25.3 99.6 246.8 At1g27540 839645 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
25.0 99.6 157.0 At1g13710 837932 CYP78A5 member of CYP78A O.I. C.G. H.G.
25.0 99.6 102.0 At5g28640 832968 AN3 (ANGUSTIFOLIA 3) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors. O.I. C.G. H.G.
24.8 99.6 13.4 At4g35900 829744 FD bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia. O.I. C.G. H.G.
24.6 99.6 17.2 At3g18630 821394 uracil DNA glycosylase family protein F:uracil DNA N-glycosylase activity;P:DNA repair, base-excision repair;C:chloroplast;BOVMFP O.I. C.G. H.G.
23.9 99.6 108.7 At1g44760 841040 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;PMO O.I. C.G. H.G.
23.8 99.6 110.8 At2g29570 817506 PCNA2 (PROLIFERATING CELL NUCLEAR ANTIGEN 2) Functionally interacts with POLH to repair DNA damaged by UVB damage. O.I. C.G. H.G.
23.6 99.6 50.2 At2g22840 816815 AtGRF1 (GROWTH-REGULATING FACTOR 1) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower O.I. C.G. H.G.
23.4 99.6 173.9 At2g26330 817173 ER (ERECTA) Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. O.I. C.G. H.G.
23.4 99.6 32.9 At1g29270 839801 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
23.3 99.6 55.5 At4g34400 829590 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:endomembrane system;MOBFPVA O.I. C.G. H.G.
23.2 99.6 26.7 At1g74890 843828 ARR15 (RESPONSE REGULATOR 15) Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment. O.I. C.G. H.G.
23.0 99.6 135.4 At2g42610 818861 LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
23.0 99.6 33.9 At3g23295 - - O.I. C.G. H.G.
22.9 99.6 348.1 At4g29030 829024 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA O.I. C.G. H.G.
22.4 99.6 36.5 At5g48820 834940 ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE) Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. O.I. C.G. H.G.
22.3 99.6 23.3 At5g66940 836828 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO O.I. C.G. H.G.
22.0 99.6 39.3 At3g61830 825356 ARF18 (AUXIN RESPONSE FACTOR 18) F:transcription factor activity;P:response to hormone stimulus, regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PMBAFO O.I. C.G. H.G.
22.0 99.6 21.5 At3g63300 825505 phosphoinositide binding F:phosphoinositide binding;P:signal transduction;C:unknown;OMPBF O.I. C.G. H.G.
22.0 99.6 19.5 At1g22490 838855 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
21.8 99.6 29.6 At3g22790 821850 kinase interacting family protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAV O.I. C.G. H.G.
21.7 99.6 40.6 At3g06220 819796 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
21.5 99.6 84.5 At5g24670 832539 catalytic/ hydrolase/ zinc ion binding F:hydrolase activity, catalytic activity, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;BOFMP O.I. C.G. H.G.
20.5 99.6 53.0 At5g46280 834670 DNA replication licensing factor, putative F:nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication initiation, DNA replication;C:nucleus;MOFPABV O.I. C.G. H.G.
20.1 99.6 16.0 At2g01210 814649 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall;PMOBFVA O.I. C.G. H.G.
19.8 99.6 21.6 At4g27240 828832 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PFO O.I. C.G. H.G.
19.6 99.6 116.8 At1g07370 837249 PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation. O.I. C.G. H.G.
19.1 99.6 47.0 At3g17680 821035 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF O.I. C.G. H.G.
19.0 99.5 43.0 At3g02210 821245 COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR) F:unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
18.9 99.5 76.3 At2g43800 818984 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MPFOBVA O.I. C.G. H.G.
18.9 99.5 25.2 At5g07180 830609 ERL2 (ERECTA-LIKE 2) Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments. O.I. C.G. H.G.
18.8 99.5 131.1 At5g10390 830903 histone H3 F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPO O.I. C.G. H.G.
18.6 99.5 25.4 At3g12170 820394 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
18.5 99.5 61.2 At5g65410 836666 HB25 (HOMEOBOX PROTEIN 25) Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family. O.I. C.G. H.G.
18.5 99.5 20.1 At3g63440 825519 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. O.I. C.G. H.G.
18.4 99.5 50.3 At5g48360 834889 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MPOFVBA O.I. C.G. H.G.
18.4 99.5 34.2 At3g13960 820609 AtGRF5 (GROWTH-REGULATING FACTOR 5) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. O.I. C.G. H.G.
18.3 99.5 20.8 At5g23690 832434 polynucleotide adenylyltransferase family protein F:RNA binding, nucleotidyltransferase activity;P:RNA processing;C:unknown;BOFMPVA O.I. C.G. H.G.
18.2 99.5 39.1 At2g33860 817956 ETT (ETTIN) ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF. O.I. C.G. H.G.
18.2 99.5 29.6 At3g13175 820507 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
17.8 99.5 34.8 At5g19100 832030 extracellular dermal glycoprotein-related / EDGP-related F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;P O.I. C.G. H.G.
17.5 99.5 24.7 At4g24540 828556 AGL24 (AGAMOUS-LIKE 24) Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain. O.I. C.G. H.G.
17.2 99.5 331.4 At2g28790 817428 osmotin-like protein, putative F:molecular_function unknown;P:response to other organism;C:plant-type cell wall;PFMBO O.I. C.G. H.G.
17.1 99.5 63.4 At4g02060 828153 PRL (PROLIFERA) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. O.I. C.G. H.G.
17.1 99.5 45.5 At5g11160 830985 APT5 (Adenine phosphoribosyltransferase 5) F:adenine phosphoribosyltransferase activity;P:nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process;C:cellular_component unknown;BOAMFP O.I. C.G. H.G.
17.0 99.5 95.8 At3g61310 825303 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
16.9 99.5 124.3 At5g67260 836861 CYCD3 Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. O.I. C.G. H.G.
16.8 99.5 25.6 At2g29890 817539 VLN1 (VILLIN-LIKE 1) Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization. O.I. C.G. H.G.
16.8 99.5 10.3 At1g60630 842357 leucine-rich repeat family protein F:protein kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
16.7 99.5 23.7 At1g67040 843024 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF O.I. C.G. H.G.
16.6 99.5 35.0 At1g63160 842620 replication factor C 40 kDa, putative F:in 6 functions;P:DNA replication;C:DNA replication factor C complex;BOMFAPV O.I. C.G. H.G.
16.5 99.5 14.9 At2g45080 819115 cycp3 F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:cellular_component unknown;FOMPB O.I. C.G. H.G.
16.3 99.5 28.7 At1g67630 843086 POLA2 (DNA POLYMERASE ALPHA 2) F:DNA binding, DNA-directed DNA polymerase activity;P:DNA replication;C:mitochondrion;MFOP O.I. C.G. H.G.
16.3 99.5 28.3 At5g62710 836392 leucine-rich repeat family protein / protein kinase family protein F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
16.3 99.5 21.1 At5g11550 831027 binding F:binding;P:biological_process unknown;C:chloroplast;PMFOBV O.I. C.G. H.G.
16.2 99.5 77.8 At1g28110 839704 SCPL45 (SERINE CARBOXYPEPTIDASE-LIKE 45 PRECURSOR) F:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFOB O.I. C.G. H.G.
16.2 99.5 40.6 At2g16780 816179 MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2) Encodes a WD-40 repeat protein similar to yeast MSI1. O.I. C.G. H.G.
16.2 99.5 13.1 At4g21270 827876 ATK1 (ARABIDOPSIS THALIANA KINESIN 1) Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis. O.I. C.G. H.G.
16.1 99.5 32.1 At1g14440 838006 AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31) F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PMOBF O.I. C.G. H.G.
16.0 99.5 123.6 At3g53190 824485 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFO O.I. C.G. H.G.
15.8 99.5 19.0 At5g61120 836233 - F:unknown;P:biological_process unknown;C:unknown;PMO O.I. C.G. H.G.
15.8 99.5 18.1 At5g55340 835627 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF O.I. C.G. H.G.
15.7 99.5 87.1 At3g54820 824647 PIP2 F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV O.I. C.G. H.G.
15.6 99.5 46.1 At5g61000 836221 replication protein, putative F:DNA binding, nucleic acid binding;P:DNA replication;C:nucleus;PMOFA O.I. C.G. H.G.
15.6 99.5 23.9 At3g13000 820486 transcription factor F:transcription factor activity;P:regulation of transcription;C:vacuole;PBOMF O.I. C.G. H.G.
15.6 99.5 19.2 At1g63250 842631 DEAD box RNA helicase, putative F:helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
15.5 99.5 31.1 At2g07690 815415 minichromosome maintenance family protein / MCM family protein Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. O.I. C.G. H.G.
15.4 99.5 64.2 At3g50070 824169 CYCD3 Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. O.I. C.G. H.G.
15.3 99.4 28.2 At4g28950 829016 ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) A member of ROP GTPase gene family. O.I. C.G. H.G.
15.3 99.4 24.8 At2g31160 817672 LSH3 (LIGHT SENSITIVE HYPOCOTYLS 3) F:molecular_function unknown;P:biological_process unknown;C:unknown;PM O.I. C.G. H.G.
15.1 99.4 44.2 At3g22740 821845 HMT3 homocysteine S-methyltransferase (HMT3) O.I. C.G. H.G.
15.1 99.4 15.7 At1g31760 840063 SWIB complex BAF60b domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOFMV O.I. C.G. H.G.
14.9 99.4 73.5 At4g25880 828694 APUM6 (Arabidopsis Pumilio 6) F:RNA binding, binding;P:unknown;C:chloroplast;MFOPB O.I. C.G. H.G.
14.8 99.4 20.0 At1g71990 843530 FUT13 (FUCOSYLTRANSFERASE 13) This gene encodes a Lewis-type alpha 1,4-fucosyltransferase O.I. C.G. H.G.
14.7 99.4 52.5 At1g53070 841741 legume lectin family protein F:carbohydrate binding, sugar binding;P:biological_process unknown;C:cell wall, plant-type cell wall;PBO O.I. C.G. H.G.
14.6 99.4 44.0 At2g42200 818820 SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b. O.I. C.G. H.G.
14.6 99.4 11.8 At3g25905 822187 CLE27 (CLAVATA3/ESR-RELATED 27) Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. O.I. C.G. H.G.
14.5 99.4 22.1 At3g18524 821383 MSH2 (MUTS HOMOLOG 2) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
83.4	99.9	29.2	At3g59270	825096	syntaxin-related family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
59.3	99.8	403.3	At4g22490	828344	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
47.4	99.8	29.2	At5g50010	835065	transcription factor/ transcription regulator	F:transcription factor activity, transcription regulator activity;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
44.0	99.8	10.7	At1g05370	837038	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FPMO	O.I.	C.G.	H.G.
40.7	99.8	19.1	At5g42230	834228	scpl41 (serine carboxypeptidase-like 41)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
39.8	99.8	329.8	At1g62500	842547	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;MBPOFVA	O.I.	C.G.	H.G.
39.2	99.8	117.4	At4g37750	829931	ANT (AINTEGUMENTA)	ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.	O.I.	C.G.	H.G.
37.6	99.7	17.7	At1g11730	837717	galactosyltransferase family protein	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;MPO	O.I.	C.G.	H.G.
37.4	99.7	40.9	At5g64110	836532	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:membrane;PFOB	O.I.	C.G.	H.G.
36.0	99.7	86.5	At3g23290	821908	-	-	O.I.	C.G.	H.G.
35.7	99.7	65.0	At1g02800	839385	ATCEL2	Encodes a protein with similarity to endo-1,4-b-glucanases and is a member of Glycoside Hydrolase Family 9. CEL2 is induced by nemotodes and is expressed in syncitia induced by Heterodera schachtii.May be involved in the development and function of syncitia.	O.I.	C.G.	H.G.
33.2	99.7	212.0	At4g03060	828102	AOP2 (ALKENYL HYDROXALKYL PRODUCING 2)	Encodes a truncated and null function protein, due to a 5-bp deletion in cDNA. The functional allele in ecotype Cvi, AOP2, encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of alkenyl glucosinolate among different ecotypes of Arabidopsis.	O.I.	C.G.	H.G.
32.4	99.7	14.3	At5g03790	831723	HB51	Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.	O.I.	C.G.	H.G.
32.3	99.7	226.8	At5g08000	830694	E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)	Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.	O.I.	C.G.	H.G.
32.1	99.7	23.7	At1g68640	843194	PAN (PERIANTHIA)	Encodes bZIP-transcription factor. Mutant plants have extra floral organs.	O.I.	C.G.	H.G.
31.9	99.7	62.0	At3g55510	824716	RBL (REBELOTE)	F:unknown;P:floral meristem determinacy;C:nucleus;MFOP	O.I.	C.G.	H.G.
31.8	99.7	44.6	At5g03440	831839	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
29.7	99.7	15.4	At1g13400	837900	NUB (NUBBIN)	Along with JAG, it is involved in stamen and carpel development. Expression is limited to the adaxial side of lateral organs. Activated by AGAMOUS in a cal-1, ap1-1 background.	O.I.	C.G.	H.G.
29.1	99.7	84.8	At2g45190	819127	AFO (ABNORMAL FLORAL ORGANS)	Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).	O.I.	C.G.	H.G.
28.9	99.7	45.7	At4g32980	829435	ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1)	Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.	O.I.	C.G.	H.G.
27.3	99.7	67.7	At1g27570	839648	phosphatidylinositol 3- and 4-kinase family protein	F:inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
26.0	99.7	18.7	At1g55200	841963	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
25.3	99.6	246.8	At1g27540	839645	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
25.0	99.6	157.0	At1g13710	837932	CYP78A5	member of CYP78A	O.I.	C.G.	H.G.
25.0	99.6	102.0	At5g28640	832968	AN3 (ANGUSTIFOLIA 3)	Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.	O.I.	C.G.	H.G.
24.8	99.6	13.4	At4g35900	829744	FD	bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia.	O.I.	C.G.	H.G.
24.6	99.6	17.2	At3g18630	821394	uracil DNA glycosylase family protein	F:uracil DNA N-glycosylase activity;P:DNA repair, base-excision repair;C:chloroplast;BOVMFP	O.I.	C.G.	H.G.
23.9	99.6	108.7	At1g44760	841040	universal stress protein (USP) family protein	F:molecular_function unknown;P:response to stress;C:unknown;PMO	O.I.	C.G.	H.G.
23.8	99.6	110.8	At2g29570	817506	PCNA2 (PROLIFERATING CELL NUCLEAR ANTIGEN 2)	Functionally interacts with POLH to repair DNA damaged by UVB damage.	O.I.	C.G.	H.G.
23.6	99.6	50.2	At2g22840	816815	AtGRF1 (GROWTH-REGULATING FACTOR 1)	Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower	O.I.	C.G.	H.G.
23.4	99.6	173.9	At2g26330	817173	ER (ERECTA)	Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.	O.I.	C.G.	H.G.
23.4	99.6	32.9	At1g29270	839801	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
23.3	99.6	55.5	At4g34400	829590	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:endomembrane system;MOBFPVA	O.I.	C.G.	H.G.
23.2	99.6	26.7	At1g74890	843828	ARR15 (RESPONSE REGULATOR 15)	Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment.	O.I.	C.G.	H.G.
23.0	99.6	135.4	At2g42610	818861	LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
23.0	99.6	33.9	At3g23295		-	-	O.I.	C.G.	H.G.
22.9	99.6	348.1	At4g29030	829024	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA	O.I.	C.G.	H.G.
22.4	99.6	36.5	At5g48820	834940	ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)	Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.	O.I.	C.G.	H.G.
22.3	99.6	23.3	At5g66940	836828	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO	O.I.	C.G.	H.G.
22.0	99.6	39.3	At3g61830	825356	ARF18 (AUXIN RESPONSE FACTOR 18)	F:transcription factor activity;P:response to hormone stimulus, regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PMBAFO	O.I.	C.G.	H.G.
22.0	99.6	21.5	At3g63300	825505	phosphoinositide binding	F:phosphoinositide binding;P:signal transduction;C:unknown;OMPBF	O.I.	C.G.	H.G.
22.0	99.6	19.5	At1g22490	838855	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
21.8	99.6	29.6	At3g22790	821850	kinase interacting family protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAV	O.I.	C.G.	H.G.
21.7	99.6	40.6	At3g06220	819796	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
21.5	99.6	84.5	At5g24670	832539	catalytic/ hydrolase/ zinc ion binding	F:hydrolase activity, catalytic activity, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;BOFMP	O.I.	C.G.	H.G.
20.5	99.6	53.0	At5g46280	834670	DNA replication licensing factor, putative	F:nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication initiation, DNA replication;C:nucleus;MOFPABV	O.I.	C.G.	H.G.
20.1	99.6	16.0	At2g01210	814649	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall;PMOBFVA	O.I.	C.G.	H.G.
19.8	99.6	21.6	At4g27240	828832	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PFO	O.I.	C.G.	H.G.
19.6	99.6	116.8	At1g07370	837249	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN)	Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.	O.I.	C.G.	H.G.
19.1	99.6	47.0	At3g17680	821035	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF	O.I.	C.G.	H.G.
19.0	99.5	43.0	At3g02210	821245	COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)	F:unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
18.9	99.5	76.3	At2g43800	818984	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MPFOBVA	O.I.	C.G.	H.G.
18.9	99.5	25.2	At5g07180	830609	ERL2 (ERECTA-LIKE 2)	Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments.	O.I.	C.G.	H.G.
18.8	99.5	131.1	At5g10390	830903	histone H3	F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPO	O.I.	C.G.	H.G.
18.6	99.5	25.4	At3g12170	820394	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
18.5	99.5	61.2	At5g65410	836666	HB25 (HOMEOBOX PROTEIN 25)	Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.	O.I.	C.G.	H.G.
18.5	99.5	20.1	At3g63440	825519	CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6)	This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.	O.I.	C.G.	H.G.
18.4	99.5	50.3	At5g48360	834889	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MPOFVBA	O.I.	C.G.	H.G.
18.4	99.5	34.2	At3g13960	820609	AtGRF5 (GROWTH-REGULATING FACTOR 5)	Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.	O.I.	C.G.	H.G.
18.3	99.5	20.8	At5g23690	832434	polynucleotide adenylyltransferase family protein	F:RNA binding, nucleotidyltransferase activity;P:RNA processing;C:unknown;BOFMPVA	O.I.	C.G.	H.G.
18.2	99.5	39.1	At2g33860	817956	ETT (ETTIN)	ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF.	O.I.	C.G.	H.G.
18.2	99.5	29.6	At3g13175	820507	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
17.8	99.5	34.8	At5g19100	832030	extracellular dermal glycoprotein-related / EDGP-related	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;P	O.I.	C.G.	H.G.
17.5	99.5	24.7	At4g24540	828556	AGL24 (AGAMOUS-LIKE 24)	Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain.	O.I.	C.G.	H.G.
17.2	99.5	331.4	At2g28790	817428	osmotin-like protein, putative	F:molecular_function unknown;P:response to other organism;C:plant-type cell wall;PFMBO	O.I.	C.G.	H.G.
17.1	99.5	63.4	At4g02060	828153	PRL (PROLIFERA)	Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.	O.I.	C.G.	H.G.
17.1	99.5	45.5	At5g11160	830985	APT5 (Adenine phosphoribosyltransferase 5)	F:adenine phosphoribosyltransferase activity;P:nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process;C:cellular_component unknown;BOAMFP	O.I.	C.G.	H.G.
17.0	99.5	95.8	At3g61310	825303	DNA-binding family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
16.9	99.5	124.3	At5g67260	836861	CYCD3	Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.	O.I.	C.G.	H.G.
16.8	99.5	25.6	At2g29890	817539	VLN1 (VILLIN-LIKE 1)	Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization.	O.I.	C.G.	H.G.
16.8	99.5	10.3	At1g60630	842357	leucine-rich repeat family protein	F:protein kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
16.7	99.5	23.7	At1g67040	843024	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF	O.I.	C.G.	H.G.
16.6	99.5	35.0	At1g63160	842620	replication factor C 40 kDa, putative	F:in 6 functions;P:DNA replication;C:DNA replication factor C complex;BOMFAPV	O.I.	C.G.	H.G.
16.5	99.5	14.9	At2g45080	819115	cycp3	F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:cellular_component unknown;FOMPB	O.I.	C.G.	H.G.
16.3	99.5	28.7	At1g67630	843086	POLA2 (DNA POLYMERASE ALPHA 2)	F:DNA binding, DNA-directed DNA polymerase activity;P:DNA replication;C:mitochondrion;MFOP	O.I.	C.G.	H.G.
16.3	99.5	28.3	At5g62710	836392	leucine-rich repeat family protein / protein kinase family protein	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
16.3	99.5	21.1	At5g11550	831027	binding	F:binding;P:biological_process unknown;C:chloroplast;PMFOBV	O.I.	C.G.	H.G.
16.2	99.5	77.8	At1g28110	839704	SCPL45 (SERINE CARBOXYPEPTIDASE-LIKE 45 PRECURSOR)	F:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFOB	O.I.	C.G.	H.G.
16.2	99.5	40.6	At2g16780	816179	MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2)	Encodes a WD-40 repeat protein similar to yeast MSI1.	O.I.	C.G.	H.G.
16.2	99.5	13.1	At4g21270	827876	ATK1 (ARABIDOPSIS THALIANA KINESIN 1)	Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis.	O.I.	C.G.	H.G.
16.1	99.5	32.1	At1g14440	838006	AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31)	F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PMOBF	O.I.	C.G.	H.G.
16.0	99.5	123.6	At3g53190	824485	pectate lyase family protein	F:lyase activity, pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFO	O.I.	C.G.	H.G.
15.8	99.5	19.0	At5g61120	836233	-	F:unknown;P:biological_process unknown;C:unknown;PMO	O.I.	C.G.	H.G.
15.8	99.5	18.1	At5g55340	835627	long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein	F:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOF	O.I.	C.G.	H.G.
15.7	99.5	87.1	At3g54820	824647	PIP2	F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV	O.I.	C.G.	H.G.
15.6	99.5	46.1	At5g61000	836221	replication protein, putative	F:DNA binding, nucleic acid binding;P:DNA replication;C:nucleus;PMOFA	O.I.	C.G.	H.G.
15.6	99.5	23.9	At3g13000	820486	transcription factor	F:transcription factor activity;P:regulation of transcription;C:vacuole;PBOMF	O.I.	C.G.	H.G.
15.6	99.5	19.2	At1g63250	842631	DEAD box RNA helicase, putative	F:helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
15.5	99.5	31.1	At2g07690	815415	minichromosome maintenance family protein / MCM family protein	Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.	O.I.	C.G.	H.G.
15.4	99.5	64.2	At3g50070	824169	CYCD3	Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.	O.I.	C.G.	H.G.
15.3	99.4	28.2	At4g28950	829016	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)	A member of ROP GTPase gene family.	O.I.	C.G.	H.G.
15.3	99.4	24.8	At2g31160	817672	LSH3 (LIGHT SENSITIVE HYPOCOTYLS 3)	F:molecular_function unknown;P:biological_process unknown;C:unknown;PM	O.I.	C.G.	H.G.
15.1	99.4	44.2	At3g22740	821845	HMT3	homocysteine S-methyltransferase (HMT3)	O.I.	C.G.	H.G.
15.1	99.4	15.7	At1g31760	840063	SWIB complex BAF60b domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOFMV	O.I.	C.G.	H.G.
14.9	99.4	73.5	At4g25880	828694	APUM6 (Arabidopsis Pumilio 6)	F:RNA binding, binding;P:unknown;C:chloroplast;MFOPB	O.I.	C.G.	H.G.
14.8	99.4	20.0	At1g71990	843530	FUT13 (FUCOSYLTRANSFERASE 13)	This gene encodes a Lewis-type alpha 1,4-fucosyltransferase	O.I.	C.G.	H.G.
14.7	99.4	52.5	At1g53070	841741	legume lectin family protein	F:carbohydrate binding, sugar binding;P:biological_process unknown;C:cell wall, plant-type cell wall;PBO	O.I.	C.G.	H.G.
14.6	99.4	44.0	At2g42200	818820	SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9)	Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b.	O.I.	C.G.	H.G.
14.6	99.4	11.8	At3g25905	822187	CLE27 (CLAVATA3/ESR-RELATED 27)	Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.	O.I.	C.G.	H.G.
14.5	99.4	22.1	At3g18524	821383	MSH2 (MUTS HOMOLOG 2)	Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-728-raw-cel-1062074653
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-728-raw-cel-1062074653 GSE experiment -

GSM ID -

Assay name E-MEXP-728-raw-cel-1062074653

GSE experiment -