CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-715-raw-cel-1121836274

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
41.0 99.8 271.6 At1g28660 839766 lipase, putative F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
17.5 99.5 65.9 At5g04530 830332 KCS19 (3-KETOACYL-COA SYNTHASE 19) Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
14.9 99.4 562.6 At3g16370 820884 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:apoplast;PBFOM O.I. C.G. H.G.
14.9 99.4 207.5 At2g39310 818516 JAL22 (JACALIN-RELATED LECTIN 22) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
14.6 99.4 179.1 At2g21140 816649 ATPRP2 (PROLINE-RICH PROTEIN 2) Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques. O.I. C.G. H.G.
14.2 99.4 83.6 At5g64620 836583 C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. O.I. C.G. H.G.
13.8 99.4 71.4 At1g52100 841640 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:membrane;PFO O.I. C.G. H.G.
13.6 99.4 9.1 At3g53250 824492 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO O.I. C.G. H.G.
13.5 99.4 584.6 At2g06850 815247 EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE) endoxyloglucan transferase (EXGT-A1) gene O.I. C.G. H.G.
13.3 99.4 188.3 At5g65390 836664 AGP7 F:unknown;P:unknown;C:anchored to membrane;BMOPFVA O.I. C.G. H.G.
12.9 99.3 29.4 At1g78260 844161 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBA O.I. C.G. H.G.
12.6 99.3 515.0 At5g20250 832147 DIN10 (DARK INDUCIBLE 10) encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. O.I. C.G. H.G.
12.0 99.3 98.1 At1g30750 839955 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPV O.I. C.G. H.G.
11.6 99.3 132.5 At1g25230 839105 purple acid phosphatase family protein F:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:endomembrane system;MOBPF O.I. C.G. H.G.
11.5 99.3 271.4 At2g37130 818289 peroxidase 21 (PER21) (P21) (PRXR5) F:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus;C:endomembrane system;PFO O.I. C.G. H.G.
11.4 99.3 10.1 At3g59340 825103 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPA O.I. C.G. H.G.
11.1 99.2 79.3 At1g29090 839784 peptidase C1A papain family protein F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
10.5 99.2 141.5 At2g16280 816124 KCS9 (3-KETOACYL-COA SYNTHASE 9) Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
9.7 99.1 125.8 At2g43050 818907 ATPMEPCRD F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
9.6 99.1 238.3 At1g67730 843098 YBR159 Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene. O.I. C.G. H.G.
9.6 99.1 62.7 At2g01890 814720 PAP8 (PURPLE ACID PHOSPHATASE 8) Encodes a purple acid phosphatase (PAP) belonging to the low molecular weight plant PAP group. O.I. C.G. H.G.
9.1 99.1 58.3 At4g25830 828688 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
9.0 99.1 105.2 At1g17840 838363 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. O.I. C.G. H.G.
9.0 99.1 31.6 At1g71020 843442 armadillo/beta-catenin repeat family protein / U-box domain-containing protein F:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBV O.I. C.G. H.G.
9.0 99.1 23.9 At2g41850 818785 PGAZAT (POLYGALACTURONASE ABSCISSION ZONE A. THALIANA) ADPG2. O.I. C.G. H.G.
8.9 99.0 182.8 At1g62660 842563 beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:vacuole;BPFOMA O.I. C.G. H.G.
8.7 99.0 96.3 At3g02110 821207 scpl25 (serine carboxypeptidase-like 25) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
41.0	99.8	271.6	At1g28660	839766	lipase, putative	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
17.5	99.5	65.9	At5g04530	830332	KCS19 (3-KETOACYL-COA SYNTHASE 19)	Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
14.9	99.4	562.6	At3g16370	820884	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:apoplast;PBFOM	O.I.	C.G.	H.G.
14.9	99.4	207.5	At2g39310	818516	JAL22 (JACALIN-RELATED LECTIN 22)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
14.6	99.4	179.1	At2g21140	816649	ATPRP2 (PROLINE-RICH PROTEIN 2)	Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques.	O.I.	C.G.	H.G.
14.2	99.4	83.6	At5g64620	836583	C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2)	Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.	O.I.	C.G.	H.G.
13.8	99.4	71.4	At1g52100	841640	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:membrane;PFO	O.I.	C.G.	H.G.
13.6	99.4	9.1	At3g53250	824492	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
13.5	99.4	584.6	At2g06850	815247	EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE)	endoxyloglucan transferase (EXGT-A1) gene	O.I.	C.G.	H.G.
13.3	99.4	188.3	At5g65390	836664	AGP7	F:unknown;P:unknown;C:anchored to membrane;BMOPFVA	O.I.	C.G.	H.G.
12.9	99.3	29.4	At1g78260	844161	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBA	O.I.	C.G.	H.G.
12.6	99.3	515.0	At5g20250	832147	DIN10 (DARK INDUCIBLE 10)	encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.	O.I.	C.G.	H.G.
12.0	99.3	98.1	At1g30750	839955	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPV	O.I.	C.G.	H.G.
11.6	99.3	132.5	At1g25230	839105	purple acid phosphatase family protein	F:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:endomembrane system;MOBPF	O.I.	C.G.	H.G.
11.5	99.3	271.4	At2g37130	818289	peroxidase 21 (PER21) (P21) (PRXR5)	F:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus;C:endomembrane system;PFO	O.I.	C.G.	H.G.
11.4	99.3	10.1	At3g59340	825103	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPA	O.I.	C.G.	H.G.
11.1	99.2	79.3	At1g29090	839784	peptidase C1A papain family protein	F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
10.5	99.2	141.5	At2g16280	816124	KCS9 (3-KETOACYL-COA SYNTHASE 9)	Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
9.7	99.1	125.8	At2g43050	818907	ATPMEPCRD	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
9.6	99.1	238.3	At1g67730	843098	YBR159	Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.	O.I.	C.G.	H.G.
9.6	99.1	62.7	At2g01890	814720	PAP8 (PURPLE ACID PHOSPHATASE 8)	Encodes a purple acid phosphatase (PAP) belonging to the low molecular weight plant PAP group.	O.I.	C.G.	H.G.
9.1	99.1	58.3	At4g25830	828688	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
9.0	99.1	105.2	At1g17840	838363	WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)	Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.	O.I.	C.G.	H.G.
9.0	99.1	31.6	At1g71020	843442	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	F:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBV	O.I.	C.G.	H.G.
9.0	99.1	23.9	At2g41850	818785	PGAZAT (POLYGALACTURONASE ABSCISSION ZONE A. THALIANA)	ADPG2.	O.I.	C.G.	H.G.
8.9	99.0	182.8	At1g62660	842563	beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:vacuole;BPFOMA	O.I.	C.G.	H.G.
8.7	99.0	96.3	At3g02110	821207	scpl25 (serine carboxypeptidase-like 25)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-715-raw-cel-1121836274
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-715-raw-cel-1121836274 GSE experiment -

GSM ID -

Assay name E-MEXP-715-raw-cel-1121836274

GSE experiment -