Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-711-raw-cel-1563002803
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
188.4100.094.4At4g13420826973HAK5 (HIGH AFFINITY K+ TRANSPORTER 5)Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.O.I.C.G.H.G.
177.7100.0131.7At1g764708439803-beta-hydroxy-delta5-steroid dehydrogenase/ binding / catalytic/ cinnamoyl-CoA reductaseF:3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, steroid biosynthetic process, metabolic process;C:endomembrane system;OBPFMAVO.I.C.G.H.G.
169.5100.0113.1At1g64160842720disease resistance-responsive family protein / dirigent family proteinF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;PO.I.C.G.H.G.
153.999.933.4At2g43580818960chitinase, putativeF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBFOMVO.I.C.G.H.G.
107.099.9257.2At3g49620824124DIN11 (DARK INDUCIBLE 11)encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.O.I.C.G.H.G.
105.899.9110.2At4g08780826448peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFMO.I.C.G.H.G.
68.699.9115.5At3g28930822529AIG2 (AVRRPT2-INDUCED GENE 2)avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2O.I.C.G.H.G.
67.799.966.4At1g69920843328ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
66.899.844.8At3g16330820880unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
54.999.8122.9At4g21680828255proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOFO.I.C.G.H.G.
54.399.8286.6At2g39030818489GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPAO.I.C.G.H.G.
53.199.822.4At2g35730818143heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:endomembrane system;PO.I.C.G.H.G.
50.999.8147.4At1g23730838983BCA3 (BETA CARBONIC ANHYDRASE 4)F:carbonate dehydratase activity, zinc ion binding;P:carbon utilization;C:cytosol, plasma membrane, membrane;BOPFMAO.I.C.G.H.G.
50.999.835.1At3g60120825182BGLU27 (BETA GLUCOSIDASE 27)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BOPMFAO.I.C.G.H.G.
50.199.8160.9At5g61160836237AACT1 (anthocyanin 5-aromatic acyltransferase 1)F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
49.999.898.9At4g24350828538phosphorylase family proteinF:catalytic activity, nutrient reservoir activity;P:response to wounding;C:plant-type cell wall;BPOAFO.I.C.G.H.G.
47.499.8219.3At3g26830822298PAD3 (PHYTOALEXIN DEFICIENT 3)Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.O.I.C.G.H.G.
42.399.832.1At4g34210829569ASK11 (ARABIDOPSIS SKP1-LIKE 11)one of 20 SKP1 homologs in Arabidopsis. Protein is most similar to ASK12 and RNAi lines show defects in stamen development.O.I.C.G.H.G.
41.099.8165.4At4g08770826447peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFO.I.C.G.H.G.
39.099.895.6At1g49570841381peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBO.I.C.G.H.G.
39.099.881.6At3g50770824241calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:chloroplast;MFPOBO.I.C.G.H.G.
38.699.866.0At1g33960840293AIG1 (AVRRPT2-INDUCED GENE 1)Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2O.I.C.G.H.G.
38.199.823.5At2g31230817680ATERF15 (Ethylene-responsive element binding factor 15)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.O.I.C.G.H.G.
35.699.754.4At3g04000819555short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAVO.I.C.G.H.G.
34.199.725.1At1g07260837237UGT71C3 (UDP-GLUCOSYL TRANSFERASE 71C3)F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
33.599.7102.3At1g10585837600transcription factorF:transcription factor activity;P:regulation of transcription;C:nucleus;PO.I.C.G.H.G.
33.199.7110.2At2g30770817628CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13)putative cytochrome P450O.I.C.G.H.G.
31.399.7173.6At5g39580833954peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus, N-terminal protein myristoylation;C:endomembrane system;PFOO.I.C.G.H.G.
29.899.7156.4At1g55020841944LOX1lipoxygenase, a defense gene conferring resistance Xanthomonas campestrisO.I.C.G.H.G.
29.699.725.6At1g66370842955MYB113 (myb domain protein 113)Encodes a member of the MYB family of transcription factors. Involved in regulation of anthocyanin biosynthesis. Affects the expression of enzymes involved in later steps of anthocyanin biosynthesis.O.I.C.G.H.G.
29.599.7213.7At4g39950830154CYP79B2Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.O.I.C.G.H.G.
29.599.726.6At3g26820822297esterase/lipase/thioesterase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:biological_process unknown;C:unknown;BPOMFO.I.C.G.H.G.
29.099.7251.2At3g54640824629TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).O.I.C.G.H.G.
28.799.7130.4At3g47540823908chitinase, putativeF:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOFO.I.C.G.H.G.
27.899.7107.0At1g15520838122PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots.O.I.C.G.H.G.
27.799.764.1At4g18360827563(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeF:glycolate oxidase activity, electron carrier activity, oxidoreductase activity, FMN binding, catalytic activity;P:metabolic process;C:peroxisome;OBFMPAO.I.C.G.H.G.
27.499.7115.3At3g44720823601ADT4 (arogenate dehydratase 4)Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].O.I.C.G.H.G.
27.499.747.0At1g60730842367aldo/keto reductase family proteinF:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:unknown;BOFMPAO.I.C.G.H.G.
27.199.7157.5At4g37520829907peroxidase 50 (PER50) (P50) (PRXR2)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cytoplasm;PFOMO.I.C.G.H.G.
26.899.7141.6At3g23550821934MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMO.I.C.G.H.G.
26.199.766.0At3g54150824582embryo-abundant protein-relatedF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOAO.I.C.G.H.G.
25.499.6293.3At4g16260827320catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:cell wall, plasma membrane;POO.I.C.G.H.G.
25.499.6157.1At1g24807839085anthranilate synthase beta subunit, putativeF:catalytic activity, anthranilate synthase activity;P:glutamine metabolic process, biosynthetic process, metabolic process;C:chloroplast;BOFAMPO.I.C.G.H.G.
24.799.6133.4At3g48890824050ATMP2putative progesterone-binding protein homolog (Atmp2) mRNA,O.I.C.G.H.G.
24.299.665.9At5g01500831861mitochondrial substrate carrier family proteinencodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnoverO.I.C.G.H.G.
24.199.619.5At5g12930831133unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABFO.I.C.G.H.G.
23.999.629.8At1g33030840198O-methyltransferase family 2 proteinF:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOMO.I.C.G.H.G.
23.899.6173.9At2g02990814828RNS1 (RIBONUCLEASE 1)member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.O.I.C.G.H.G.
23.799.688.6At4g39030830058EDS5 (ENHANCED DISEASE SUSCEPTIBILITY 5)Encodes an orphan multidrug and toxin extrusion transporter. Essential component of salicylic acid-dependent signaling for disease resistance. Member of the MATE-transporter family. Expression induced by salicylic acid. Mutants are salicylic acid-deficient.O.I.C.G.H.G.
23.499.633.4At2g42360818837zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
23.199.641.3At5g40590834057DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;POFO.I.C.G.H.G.
22.799.677.5At2g35980818171YLS9 (YELLOW-LEAF-SPECIFIC GENE 9)Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.O.I.C.G.H.G.
22.699.658.8At1g10700837613ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3)F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:chloroplast;BOMFAPVO.I.C.G.H.G.
22.699.658.1At2g29470817496ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
22.599.6127.9At5g03610831778GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
22.399.659.2At2g22250816758aminotransferase class I and II family proteinF:L-aspartate:2-oxoglutarate aminotransferase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, catalytic activity;P:embryonic development ending in seed dormancy;C:chloroplast;BOPAMFO.I.C.G.H.G.
22.299.6113.4At5g07010830592ST2A (SULFOTRANSFERASE 2A)Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).O.I.C.G.H.G.
22.199.618.3At5g46590834702anac096 (Arabidopsis NAC domain containing protein 96)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
21.999.645.2At3g09410820100pectinacetylesterase family proteinF:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOBO.I.C.G.H.G.
21.899.6124.8At3g09940820155MDHAR (MONODEHYDROASCORBATE REDUCTASE)Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.O.I.C.G.H.G.
21.799.6156.0At2g24180816952CYP71B6 (CYTOCHROME P450 71B6)cytochrome P450 monooxygenaseO.I.C.G.H.G.
21.799.684.2At4g02330828064ATPMEPCRBF:pectinesterase activity;P:response to salt stress;C:endomembrane system, cell wall;PBFAOMO.I.C.G.H.G.
21.799.654.5At5g36220833619CYP81D1 (CYTOCHROME P450 81D1)member of CYP81DO.I.C.G.H.G.
21.699.6251.1At2g24850817022TAT3 (TYROSINE AMINOTRANSFERASE 3)Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid.O.I.C.G.H.G.
21.699.681.3At5g49280834988hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPFOBVAO.I.C.G.H.G.
21.599.6185.2At5g05730830457ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.O.I.C.G.H.G.
21.599.6164.2At4g04610825793APR1 (APS REDUCTASE 1)Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.O.I.C.G.H.G.
21.599.658.7At2g30750817626CYP71A12 (cytochrome P450, family 71, subfamily A, polypeptide 12)putative cytochrome P450O.I.C.G.H.G.
21.399.680.2At2g41230818722unknown proteinF:unknown;P:biological_process unknown;C:unknown;PMO.I.C.G.H.G.
20.999.625.0At5g18290831947SIP1Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ERO.I.C.G.H.G.
20.899.665.4At2g34930818058disease resistance family proteinF:protein binding;P:signal transduction, defense response to fungus, defense response;C:cell wall;PMOBFAVO.I.C.G.H.G.
20.599.685.5At4g14680827118APS3ATP sulfurylaseO.I.C.G.H.G.
20.299.663.9At3g60540825225sec61beta family proteinF:protein transporter activity;P:protein transport;C:unknown;MFPOO.I.C.G.H.G.
20.099.663.2At5g05340830416peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:apoplast, cell wall;PFOBMO.I.C.G.H.G.
19.799.6196.2At2g04400814980indole-3-glycerol phosphate synthase (IGPS)F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFPO.I.C.G.H.G.
19.699.6111.0At3g56200824786amino acid transporter family proteinEncodes a putative amino acid transporter.O.I.C.G.H.G.
19.299.630.9At1g06160837125ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.O.I.C.G.H.G.
19.099.576.5At1g72900843621disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOO.I.C.G.H.G.
18.999.5141.2At3g08640820011alphavirus core protein familyF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, chloroplast, plastid, chloroplast envelope;MBPOFVAO.I.C.G.H.G.
18.999.572.6At5g22300832290NIT4 (NITRILASE 4)encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.O.I.C.G.H.G.
18.899.5313.5At4g27070828815TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2)Tryptophan synthase beta. Expressed at low levels in all tissues.O.I.C.G.H.G.
18.599.581.3At1g26380839180FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMO.I.C.G.H.G.
17.999.5178.5At5g17380831604pyruvate decarboxylase family proteinF:pyruvate decarboxylase activity, magnesium ion binding, thiamin pyrophosphate binding, transferase activity, catalytic activity;P:unknown;C:cellular_component unknown;OBFPAMVO.I.C.G.H.G.
17.799.5152.0At5g27380832797GSH2 (GLUTATHIONE SYNTHETASE 2)Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.O.I.C.G.H.G.
17.599.5108.0At1g51760841602IAR3 (IAA-ALANINE RESISTANT 3)encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.O.I.C.G.H.G.
17.599.554.1At5g13080831147WRKY75WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation.O.I.C.G.H.G.
17.499.5171.3At1g61800842477GPT2glucose6-Phosphate/phosphate transporter 2O.I.C.G.H.G.
17.399.559.0At2g29490817498ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
17.399.531.0At1g71140843454MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:plasma membrane, membrane;BOPFMAO.I.C.G.H.G.
17.199.5172.3At5g17990831666TRP1 (tryptophan biosynthesis 1)Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.O.I.C.G.H.G.
17.199.543.1At3g01970821270WRKY45member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
16.499.5118.8At5g06870830578PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2)Encodes a polygalacturonase inhibiting protein involved in plant defense response. PGIPs inhibit the activity of pectin degrading enzymes such as those produced by fungal pathogens. PGIP2 is induced by fungal infection and methyl jasmonate.O.I.C.G.H.G.
16.399.518.5At5g44820834512unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POO.I.C.G.H.G.
16.299.5214.7At4g33720829514pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.C.G.H.G.
16.199.5152.9At2g38860818470YLS5Encodes protease I (pfpI)-like protein YLS5.O.I.C.G.H.G.
16.199.594.5At3g55970824763oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
16.199.593.0At1g66690842987S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFO.I.C.G.H.G.
16.199.531.1At4g37290829883unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
16.099.590.4At4g22610828357protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
15.799.534.9At5g57060835810unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.



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