Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-550-raw-cel-871342508
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
47.499.811.4At1g53080841742legume lectin family proteinF:carbohydrate binding, sugar binding;P:biological_process unknown;C:plant-type cell wall;PBOO.I.C.G.H.G.
41.499.826.2At5g03720831749AT-HSFA3Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.O.I.C.G.H.G.
38.799.842.4At3g11020820273DREB2B (DRE/CRT-BINDING PROTEIN 2B)encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2B). The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A.O.I.C.G.H.G.
33.999.741.8At1g34180840317anac016 (Arabidopsis NAC domain containing protein 16)F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;PO.I.C.G.H.G.
33.099.787.6At4g03320827972tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV)F:unknown;P:unknown;C:unknown;PBO.I.C.G.H.G.
32.999.750.2At1g32870840181ANAC13 (Arabidopsis thaliana NAC domain protein 13)F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMFO.I.C.G.H.G.
30.199.778.6At2g18680816383unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
29.999.788.9At3g63380825513calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVO.I.C.G.H.G.
29.199.728.5At3g05360819700AtRLP30 (Receptor Like Protein 30)F:protein binding, kinase activity;P:defense response signaling pathway, resistance gene-independent, response to cyclopentenone, signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
25.999.755.1At1g71000843439heat shock protein bindingF:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
25.999.742.6At3g18610821392ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1)F:nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MOFBPVAO.I.C.G.H.G.
25.199.619.9At5g12930831133unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABFO.I.C.G.H.G.
24.199.693.7At4g27585828868band 7 family proteinF:unknown;P:biological_process unknown;C:mitochondrion, plastid, membrane;BOMPAFVO.I.C.G.H.G.
23.399.6144.1At2g03760814903STEncodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.O.I.C.G.H.G.
23.299.629.3At1g33030840198O-methyltransferase family 2 proteinF:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOMO.I.C.G.H.G.
22.399.620.4At1g24090839020RNase H domain-containing proteinF:ribonuclease H activity, nucleic acid binding;P:biological_process unknown;C:unknown;PBOAMO.I.C.G.H.G.
21.099.617.8At4g36580829810AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:chloroplast;OBMFPAVO.I.C.G.H.G.
20.699.674.8At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.O.I.C.G.H.G.
20.299.6155.0At5g03030831703DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding;P:protein folding;C:unknown;OMFBPVO.I.C.G.H.G.
19.699.642.2At1g03660839033-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
19.599.6170.0At1g17170838288ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
18.799.541.3At4g27940828907mitochondrial substrate carrier family proteinF:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOO.I.C.G.H.G.
18.699.556.4At3g50770824241calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:chloroplast;MFPOBO.I.C.G.H.G.
18.199.526.2At1g61370842431S-locus lectin protein kinase family proteinF:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
17.899.556.1At1g71330843474ATNAP5member of NAP subfamilyO.I.C.G.H.G.
17.799.553.8At3g60980825270pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:response to oxidative stress;C:unknown;POO.I.C.G.H.G.
17.599.516.2At3g57700824939protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
16.899.557.1At3g48850824046mitochondrial phosphate transporter, putativeF:binding;P:transport;C:mitochondrial inner membrane, chloroplast, membrane;MFPOO.I.C.G.H.G.
16.499.581.1At3g27280822347ATPHB4 (PROHIBITIN 4)Part of protein complexes that are necessary for proficient mitochondrial function or biogenesis, thereby supporting cell division and differentiation in apical tissuesO.I.C.G.H.G.
16.499.558.9At2g21180816653unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.499.549.4At5g20910832215zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:nucleus;PMOFVO.I.C.G.H.G.
16.099.575.3At5g50960835169NBP35 (NUCLEOTIDE BINDING PROTEIN 35)Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.O.I.C.G.H.G.
15.999.5103.4At1g43910840990AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
15.499.584.8At1g78600844196LZF1 (LIGHT-REGULATED ZINC FINGER PROTEIN 1)F:transcription factor activity, zinc ion binding;P:chlorophyll biosynthetic process, chloroplast organization, anthocyanin biosynthetic process, regulation of photomorphogenesis, regulation of transcription;C:nuclear speck;POMO.I.C.G.H.G.
15.399.4169.3At2g41730818772unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
15.199.421.8At5g66850836819MAPKKK5member of MEKK subfamilyO.I.C.G.H.G.
14.899.453.8At4g03430827925EMB2770 (EMBRYO DEFECTIVE 2770)Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.O.I.C.G.H.G.
14.799.4165.5At5g56350835735pyruvate kinase, putativeF:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:cellular_component unknown;BOMPFAO.I.C.G.H.G.
14.599.432.1At5g67630836899DNA helicase, putativeF:DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:unknown;C:nucleolus, chloroplast;BMOFPAO.I.C.G.H.G.
14.299.470.5At2g15690816062pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVAO.I.C.G.H.G.
14.099.437.6At2g20330816552transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFBOPAVO.I.C.G.H.G.
13.999.476.9At4g17260827440L-lactate dehydrogenase, putativeF:in 6 functions;P:response to salt stress, response to abscisic acid stimulus;C:plasma membrane;BOMFPAO.I.C.G.H.G.
13.899.440.7At4g15490827221UGT84A3Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.O.I.C.G.H.G.
13.799.433.6At1g05000839348tyrosine specific protein phosphatase family proteinF:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FPOBMO.I.C.G.H.G.
13.599.492.2At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseO.I.C.G.H.G.
13.599.410.4At2g36750818247UGT73C1 (UDP-GLUCOSYL TRANSFERASE 73C1)F:cis-zeatin O-beta-D-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups, trans-zeatin O-beta-D-glucosyltransferase activity;P:response to UV-B;C:unknown;PMVBOFO.I.C.G.H.G.
13.299.436.6At5g19400832060SMG7F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
13.099.441.0At5g61010836222ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
12.999.347.4At1g18660838447zinc finger (C3HC4-type RING finger) family proteinF:protein binding, ATP-dependent peptidase activity, binding, zinc ion binding;P:ATP-dependent proteolysis;C:unknown;MOPFBVAO.I.C.G.H.G.
12.899.326.7At1g71140843454MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:plasma membrane, membrane;BOPFMAO.I.C.G.H.G.
12.799.345.5At4g27680828882MSP1 protein, putative / intramitochondrial sorting protein, putativeF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;OBMFPAVO.I.C.G.H.G.
12.699.322.8At3g01800821076ribosome recycling factor family protein / ribosome releasing factor family proteinF:unknown;P:translation;C:mitochondrion;BOMPFO.I.C.G.H.G.
12.599.319.3At5g09420830801ATTOC64-V (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V)F:amidase activity, binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor;P:protein targeting to mitochondrion;C:mitochondrion;BOMFPAO.I.C.G.H.G.
12.599.317.6At2g35480818113unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
12.499.331.9At1g08050837321zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:plasma membrane;BMOPFAVO.I.C.G.H.G.
12.399.323.7At3g54130824580josephin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFO.I.C.G.H.G.
12.299.351.5At1g66880843006serine/threonine protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
12.199.381.7At3g53230824489cell division cycle protein 48, putative / CDC48, putativeF:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAVO.I.C.G.H.G.
12.199.366.9At5g18400831958unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MFOPO.I.C.G.H.G.
12.199.353.2At3g15430820782regulator of chromosome condensation (RCC1) family proteinF:Ran GTPase binding;P:biological_process unknown;C:cellular_component unknown;MOPBFAVO.I.C.G.H.G.
11.999.393.9At2g26440817184pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
11.999.326.2At1g23550838965SRO2 (SIMILAR TO RCD ONE 2)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.H.G.
11.899.322.8At5g58575835971-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
11.799.336.1At1g02090839241FUS5 (FUSCA 5)encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.O.I.C.G.H.G.
11.799.313.6At5g16930831556AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;OMBFPAVO.I.C.G.H.G.
11.799.38.9At5g15700831424DNA-directed RNA polymerase (RPOT2)F:DNA-directed RNA polymerase activity, DNA binding;P:transcription;C:unknown;OFPMVBO.I.C.G.H.G.
11.699.355.0At5g26760832734unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FPMOBO.I.C.G.H.G.
11.699.351.3At3g03950819550protein bindingPhysically interacts with CIPK1. Located in the nucleus.O.I.C.G.H.G.
11.599.399.1At2g24500816986FZFEncodes a C2H2 zinc finger protein FZF.O.I.C.G.H.G.
11.599.310.8At1g49150841338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.499.377.1At1g64140842718-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPBFVO.I.C.G.H.G.
11.499.319.7At1g18380--O.I.C.G.H.G.
11.299.225.6At2g38465818428unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
11.199.2107.1At5g59540836073oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
11.199.213.1At1g50400841462porin family proteinF:voltage-gated anion channel activity;P:anion transport;C:mitochondrial outer membrane;MFOPO.I.C.G.H.G.
11.099.248.9At4g35800829734NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.O.I.C.G.H.G.
11.099.226.9At5g18270831945ANAC087F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
10.899.227.6At1g32860840180glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;POFO.I.C.G.H.G.
10.799.240.5At4g34740829626ATASE2 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2)Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage.O.I.C.G.H.G.
10.799.222.5At1g51920841620unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
10.799.222.0At5g26860832744LON1 (LON PROTEASE 1)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.O.I.C.G.H.G.
10.799.220.0At1g20350838623ATTIM17-1mitochondrial inner membrane translocaseO.I.C.G.H.G.
10.699.268.3At2g38360818416PRA1.B4 (PRENYLATED RAB ACCEPTOR 1.B4)F:molecular_function unknown;P:vesicle-mediated transport;C:endoplasmic reticulum;PMFOO.I.C.G.H.G.
10.699.239.0At3g46640823817PCL1 (PHYTOCLOCK 1)Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.O.I.C.G.H.G.
10.699.219.9At3g03060821146ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:cell wall, plant-type cell wall;OMBFPAVO.I.C.G.H.G.
10.599.221.7At1g67470843068protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAO.I.C.G.H.G.
10.599.219.2At2g40340818627AP2 domain-containing transcription factor, putative (DRE2B)encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.O.I.C.G.H.G.
10.599.217.8At3g46930823846protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
10.499.2198.2At3g55620824728emb1624 (embryo defective 1624)F:ribosome binding, translation initiation factor activity;P:embryonic development ending in seed dormancy, translational initiation;C:nucleolus;AOMFPO.I.C.G.H.G.
10.499.2186.5At3g22370821806AOX1A (ALTERNATIVE OXIDASE 1A)Encodes an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited.O.I.C.G.H.G.
10.499.246.2At1g23780838989F-box family proteinF:unknown;P:unknown;C:unknown;MPOO.I.C.G.H.G.
10.399.256.6At1g21380838737VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBO.I.C.G.H.G.
10.299.2128.1At2g32240817784-F:molecular_function unknown;P:response to cadmium ion;C:plasma membrane;MOBFPAVO.I.C.G.H.G.
10.299.234.5At4g39270830083leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
10.199.259.6At1g07360837248zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBVAO.I.C.G.H.G.
10.199.234.1At3g48090823964EDS1 (enhanced disease susceptibility 1)Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.O.I.C.G.H.G.
10.099.282.6At4g25200828623ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrialO.I.C.G.H.G.
9.999.130.4At3g09410820100pectinacetylesterase family proteinF:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOBO.I.C.G.H.G.
9.899.148.5At5g62480836368ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
9.899.147.3At1g32940840188SBT3.5F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFMO.I.C.G.H.G.



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