Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-547-raw-cel-863346448
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
143.099.957.0At4g19730827717glycosyl hydrolase family 18 proteinF:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPAO.I.C.G.H.G.
51.699.8162.5At1g65500842862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
47.499.882.0At4g01250827896WRKY22member of WRKY Transcription Factor; Group II-eO.I.C.G.H.G.
31.999.720.8At4g15975827281protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:response to chitin;C:endomembrane system;MPFOVO.I.C.G.H.G.
31.899.790.3At5g64905836614PROPEP3 (Elicitor peptide 3 precursor)F:molecular_function unknown;P:defense response, response to salicylic acid stimulus;C:cellular_component unknown;PMO.I.C.G.H.G.
30.699.744.0At4g39830830142L-ascorbate oxidase, putativeF:oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding;P:oxidation reduction;C:endomembrane system, extracellular region;BFPMOAO.I.C.G.H.G.
25.799.733.1At4g14455827091ATBET12Encodes a Bet1/Sft1-like SNARE protein, which can only partially suppresses the temperature-sensitive growth defect in sft1-1 yeast cells; however, it cannot support the deletion of the yeast BET1 gene (bet1Δ). In yeast, Bet1p is the v-SNARE (soluble N-ethylmaleimide-sensitive factor adaptor protein receptor, V-type) involved in trafficking between the ER and Golgi.O.I.C.G.H.G.
25.399.656.4At2g36690818241oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biosynthetic process;C:cellular_component unknown;POBFMO.I.C.G.H.G.
23.699.694.6At4g23810828481WRKY53member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
23.099.6114.9At1g72520843584lipoxygenase, putativeF:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth, jasmonic acid biosynthetic process, response to wounding, defense response;C:chloroplast;PMBFOO.I.C.G.H.G.
22.899.692.8At2g01180814646ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.O.I.C.G.H.G.
21.399.619.3At3g05370819701AtRLP31 (Receptor Like Protein 31)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
21.199.626.6At1g20310838619unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
21.099.627.4At4g23610828461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
19.499.642.1At1g58420842211-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
18.899.5178.6At4g24570828559mitochondrial substrate carrier family proteinF:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOO.I.C.G.H.G.
18.899.543.2At1g24140839026matrixin family proteinF:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAFO.I.C.G.H.G.
18.899.541.9At2g33580817923protein kinase family protein / peptidoglycan-binding LysM domain-containing proteinF:kinase activity;P:protein amino acid phosphorylation, cell wall macromolecule catabolic process;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
18.699.583.7At2g26190817159calmodulin-binding family proteinF:calmodulin binding;P:N-terminal protein myristoylation;C:unknown;PFOBO.I.C.G.H.G.
18.599.522.2At1g07160837227protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:chloroplast, protein serine/threonine phosphatase complex;MPOFBVAO.I.C.G.H.G.
18.299.586.0At2g24600816996ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAO.I.C.G.H.G.
17.699.559.2At4g26200828726ACS7Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.O.I.C.G.H.G.
17.399.539.6At5g18840832002sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOAO.I.C.G.H.G.
16.599.5233.1At4g12480826860pEARLI 1a putative lipid transfer protein, vernalization-responsive and cold-inducedO.I.C.G.H.G.
16.599.538.3At3g486503769688-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
16.499.5242.1At4g12490826861protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:defense response to fungus, lipid transport;C:unknown;PBOMVFAO.I.C.G.H.G.
16.499.583.0At3g02840821225immediate-early fungal elicitor family proteinF:binding;P:response to other organism, response to ozone;C:unknown;POO.I.C.G.H.G.
16.199.5165.0At1g61800842477GPT2glucose6-Phosphate/phosphate transporter 2O.I.C.G.H.G.
16.199.5128.2At4g23180828417CRK10 (CYSTEINE-RICH RLK10)Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)O.I.C.G.H.G.
16.199.577.9At2g22880816819VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
15.499.543.5At5g41740834177disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAO.I.C.G.H.G.
15.299.420.0At5g22690832332disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOAFO.I.C.G.H.G.
14.699.481.4At2g20960816630pEARLI4F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOBPVAO.I.C.G.H.G.
14.299.415.5At4g31950829325CYP82C3member of CYP82CO.I.C.G.H.G.
14.299.410.2At1g72950843626disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMO.I.C.G.H.G.
14.199.4143.6At5g47910834842RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.O.I.C.G.H.G.
14.199.451.9At1g01560839523ATMPK11member of MAP KinaseO.I.C.G.H.G.
13.699.428.6At5g64890836612PROPEP2 (Elicitor peptide 2 precursor)F:molecular_function unknown;P:response to jasmonic acid stimulus, defense response, incompatible interaction, response to salicylic acid stimulus;C:cellular_component unknown;PO.I.C.G.H.G.
13.599.452.9At5g12880831128proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
13.499.488.4At5g53550835437YSL3 (YELLOW STRIPE LIKE 3)F:oligopeptide transporter activity;P:oligopeptide transport, response to nematode;C:unknown;BPFOAVO.I.C.G.H.G.
13.199.433.9At3g10040820165transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVAO.I.C.G.H.G.
13.199.431.6At4g36550829807binding / ubiquitin-protein ligaseF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;POMFBVO.I.C.G.H.G.
12.799.321.8At1g70740843411protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
12.599.3122.9At2g18660816381EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.O.I.C.G.H.G.
12.299.343.4At1g59910842285formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MBOFPVAO.I.C.G.H.G.
12.099.317.1At1g63750842679ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein bindingF:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVAO.I.C.G.H.G.
11.999.379.2At5g52750835352heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMO.I.C.G.H.G.
11.999.329.9At1g56510842104WRR4 (WHITE RUST RESISTANCE 4)TIR-NB-LRR protein that confers resistance to four races of Albugo candida.O.I.C.G.H.G.
11.899.320.0At2g241603768109-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
11.699.371.0At3g57530824920CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitroO.I.C.G.H.G.
11.599.3150.7At5g13490831193AAC2 (ADP/ATP carrier 2)Encodes mitochondrial ADP/ATP carrierO.I.C.G.H.G.
11.499.327.2At3g18710821402PUB29 (PLANT U-BOX 29)Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.O.I.C.G.H.G.
11.399.335.8At5g47230834770ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.O.I.C.G.H.G.
11.199.237.5At1g29690839846CAD1 (constitutively activated cell death 1)Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.O.I.C.G.H.G.
10.999.290.0At2g26440817184pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
10.999.213.9At1g74650843804MYB31 (MYB DOMAIN PROTEIN 31)Member of the R2R3 factor gene family.O.I.C.G.H.G.
10.799.249.7At5g52050835280MATE efflux protein-relatedF:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;BOPFAMO.I.C.G.H.G.
10.799.222.0At5g37490833727U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBVO.I.C.G.H.G.
10.799.218.0At3g46930823846protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
10.599.260.8At4g18880827622AT-HSFA4Amember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
10.499.221.9At5g46330834676FLS2 (FLAGELLIN-SENSITIVE 2)Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.O.I.C.G.H.G.
10.399.2144.0At2g38470818429WRKY33Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.O.I.C.G.H.G.
10.299.253.1At1g13210837881ACA.l (autoinhibited Ca2+/ATPase II)F:calmodulin binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAO.I.C.G.H.G.
10.299.249.8At5g66210836753CPK28member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
10.199.255.8At1g72900843621disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOO.I.C.G.H.G.
10.199.243.6At5g01540831722LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1)Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.O.I.C.G.H.G.
10.099.2181.8At2g43620818964chitinase, putativeF:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVMO.I.C.G.H.G.
10.099.229.7At3g59080825077aspartyl protease family proteinF:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFOO.I.C.G.H.G.
9.899.150.4At1g51700841595ADOF1Encodes dof zinc finger protein (adof1).O.I.C.G.H.G.
9.699.132.1At4g24110828511unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
9.499.133.4At3g26980822315MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;PFO.I.C.G.H.G.
9.299.128.5At5g05190830401unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVO.I.C.G.H.G.
9.099.1111.7At3g02550821112LBD41 (LOB DOMAIN-CONTAINING PROTEIN 41)F:unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.099.172.7At2g35930818166PUB23 (PLANT U-BOX 23)Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.O.I.C.G.H.G.
9.099.110.1At5g11210830991ATGLR2.5member of Putative ligand-gated ion channel subunit familyO.I.C.G.H.G.
8.999.047.4At3g09830820141protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
8.999.040.9At1g18570838438MYB51 (MYB DOMAIN PROTEIN 51)Encodes a member of the R2R3-MYB transcription family. Involved in indole glucosinolate biosynthesis.O.I.C.G.H.G.
8.899.042.7At1g18390838420ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
8.899.010.6At3g12910820475transcription factorF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
8.799.019.7At4g01090827898extra-large G-protein-relatedF:unknown;P:unknown;C:unknown;MPFOBVO.I.C.G.H.G.
8.699.053.1At4g02330828064ATPMEPCRBF:pectinesterase activity;P:response to salt stress;C:endomembrane system, cell wall;PBFAOMO.I.C.G.H.G.
8.699.037.5At3g52340824399SPP2 (SUCROSE-6F-PHOSPHATE PHOSPHOHYDROLASE 2)sucrose-phosphatase (SPP2)O.I.C.G.H.G.



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