Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-547-raw-cel-863346403
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
143.299.957.1At4g19730827717glycosyl hydrolase family 18 proteinF:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPAO.I.C.G.H.G.
88.199.9150.3At5g64905836614PROPEP3 (Elicitor peptide 3 precursor)F:molecular_function unknown;P:defense response, response to salicylic acid stimulus;C:cellular_component unknown;PMO.I.C.G.H.G.
62.999.822.1At4g18540827586unknown proteinF:unknown;P:biological_process unknown;C:unknown;FPBMO.I.C.G.H.G.
61.599.828.0At3g12910820475transcription factorF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
60.599.840.0At1g07160837227protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:chloroplast, protein serine/threonine phosphatase complex;MPOFBVAO.I.C.G.H.G.
56.599.827.7At4g15975827281protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:response to chitin;C:endomembrane system;MPFOVO.I.C.G.H.G.
54.799.883.0At2g36690818241oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biosynthetic process;C:cellular_component unknown;POBFMO.I.C.G.H.G.
51.499.8144.7At2g24600816996ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAO.I.C.G.H.G.
49.199.857.0At1g78410844177VQ motif-containing proteinF:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;PO.I.C.G.H.G.
45.599.864.5At1g58420842211-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
45.399.880.1At4g01250827896WRKY22member of WRKY Transcription Factor; Group II-eO.I.C.G.H.G.
44.599.8140.1At5g57220835828CYP81F2member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi.O.I.C.G.H.G.
43.199.8127.2At2g22880816819VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
42.299.842.4At4g14455827091ATBET12Encodes a Bet1/Sft1-like SNARE protein, which can only partially suppresses the temperature-sensitive growth defect in sft1-1 yeast cells; however, it cannot support the deletion of the yeast BET1 gene (bet1Δ). In yeast, Bet1p is the v-SNARE (soluble N-ethylmaleimide-sensitive factor adaptor protein receptor, V-type) involved in trafficking between the ER and Golgi.O.I.C.G.H.G.
42.099.826.8At4g31950829325CYP82C3member of CYP82CO.I.C.G.H.G.
35.499.779.4At5g14700831322cinnamoyl-CoA reductase-relatedF:binding, 3-beta-hydroxy-delta5-steroid dehydrogenase activity, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, steroid biosynthetic process, metabolic process;C:cellular_component unknown;POBFMVAO.I.C.G.H.G.
34.399.728.4At3g21070821659NADK1 (NAD KINASE 1)Encodes a protein with NAD(H) kinase activity.O.I.C.G.H.G.
33.099.776.2At5g05300830412unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
33.099.713.4At1g43000840898zinc-binding family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
31.199.7123.6At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
30.799.7107.7At2g01180814646ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.O.I.C.G.H.G.
29.999.778.1At2g32030817763GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOFPAVMO.I.C.G.H.G.
29.499.743.1At4g39830830142L-ascorbate oxidase, putativeF:oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding;P:oxidation reduction;C:endomembrane system, extracellular region;BFPMOAO.I.C.G.H.G.
27.899.7108.1At3g02840821225immediate-early fungal elicitor family proteinF:binding;P:response to other organism, response to ozone;C:unknown;POO.I.C.G.H.G.
27.199.7117.7At1g65500842862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
26.899.784.0At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
26.199.7122.3At1g72520843584lipoxygenase, putativeF:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth, jasmonic acid biosynthetic process, response to wounding, defense response;C:chloroplast;PMBFOO.I.C.G.H.G.
25.699.765.4At3g54150824582embryo-abundant protein-relatedF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOAO.I.C.G.H.G.
25.499.631.1At1g51620841587protein kinase family proteinF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
25.399.6207.2At4g24570828559mitochondrial substrate carrier family proteinF:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOO.I.C.G.H.G.
24.799.693.5At4g02200827516drought-responsive family proteinF:unknown;P:response to water deprivation;C:unknown;PMO.I.C.G.H.G.
24.699.6191.3At3g55980824764SZF1 (SALT-INDUCIBLE ZINC FINGER 1)F:transcription factor activity;P:response to chitin, regulation of transcription;C:cellular_component unknown;MOPBFAVO.I.C.G.H.G.
23.899.628.2At1g20310838619unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
23.799.666.8At5g01540831722LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1)Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.O.I.C.G.H.G.
23.599.661.4At5g15870831444glycosyl hydrolase family 81 proteinF:hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity;P:response to cyclopentenone;C:unknown;FPOMVBO.I.C.G.H.G.
23.499.625.7At4g11300826732unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOO.I.C.G.H.G.
23.399.677.7At2g44370819044DC1 domain-containing proteinF:unknown;P:unknown;C:unknown;POMFO.I.C.G.H.G.
23.399.666.6At1g01560839523ATMPK11member of MAP KinaseO.I.C.G.H.G.
23.299.632.7At5g46330834676FLS2 (FLAGELLIN-SENSITIVE 2)Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.O.I.C.G.H.G.
22.799.697.0At3g54420824608ATEP3encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.O.I.C.G.H.G.
22.799.627.6At3g46110823754unknown proteinF:unknown;P:unknown;C:plasma membrane;PO.I.C.G.H.G.
22.299.690.9At4g31550829282WRKY11member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.O.I.C.G.H.G.
21.599.677.1At5g62150836335peptidoglycan-binding LysM domain-containing proteinF:molecular_function unknown;P:cell wall macromolecule catabolic process;C:endomembrane system;PO.I.C.G.H.G.
21.499.684.3At2g18210816336unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
21.199.613.4At2g23770816909protein kinase family protein / peptidoglycan-binding LysM domain-containing proteinF:kinase activity;P:protein amino acid phosphorylation, cell wall macromolecule catabolic process;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
20.999.695.1At3g57530824920CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitroO.I.C.G.H.G.
20.899.688.3At2g26190817159calmodulin-binding family proteinF:calmodulin binding;P:N-terminal protein myristoylation;C:unknown;PFOBO.I.C.G.H.G.
20.799.642.9At3g486503769688-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
20.499.6103.5At5g52750835352heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMO.I.C.G.H.G.
20.499.629.2At4g23190828418CRK11 (CYSTEINE-RICH RLK11)Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)O.I.C.G.H.G.
20.299.618.8At3g05370819701AtRLP31 (Receptor Like Protein 31)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
19.899.622.7At1g67520843073lectin protein kinase family proteinF:in 7 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
19.799.6112.1At1g33600840254leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:cell wall, membrane, plant-type cell wall;PMBOFAVO.I.C.G.H.G.
19.799.680.5At4g20780827826calcium-binding protein, putativeF:calcium ion binding;P:unknown;C:cellular_component unknown;MPFOBVO.I.C.G.H.G.
19.699.6264.7At4g12490826861protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:defense response to fungus, lipid transport;C:unknown;PBOMVFAO.I.C.G.H.G.
19.699.694.3At2g20960816630pEARLI4F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOBPVAO.I.C.G.H.G.
19.699.630.6At2g42360818837zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
19.599.629.1At1g57650842141-F:unknown;P:defense response;C:cellular_component unknown;PMBOFAVO.I.C.G.H.G.
19.499.626.4At4g23610828461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
19.399.654.7At1g59910842285formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MBOFPVAO.I.C.G.H.G.
19.299.648.5At5g41740834177disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAO.I.C.G.H.G.
19.199.676.7At1g72900843621disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOO.I.C.G.H.G.
18.899.578.4At4g02330828064ATPMEPCRBF:pectinesterase activity;P:response to salt stress;C:endomembrane system, cell wall;PBFAOMO.I.C.G.H.G.
18.899.569.8At1g51700841595ADOF1Encodes dof zinc finger protein (adof1).O.I.C.G.H.G.
18.799.510.6At5g46295834672unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
18.699.537.4At1g56510842104WRR4 (WHITE RUST RESISTANCE 4)TIR-NB-LRR protein that confers resistance to four races of Albugo candida.O.I.C.G.H.G.
18.499.542.7At1g24140839026matrixin family proteinF:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAFO.I.C.G.H.G.
18.199.5244.1At4g12480826860pEARLI 1a putative lipid transfer protein, vernalization-responsive and cold-inducedO.I.C.G.H.G.
17.999.582.4At4g23810828481WRKY53member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
17.899.510.6At4g04480825778-F:unknown;P:unknown;C:chloroplast;PO.I.C.G.H.G.
17.799.594.5At1g69930843329ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
17.599.5161.0At1g05575837061unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
17.599.540.4At1g21010838695unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.C.G.H.G.
17.399.546.9At1g29690839846CAD1 (constitutively activated cell death 1)Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.O.I.C.G.H.G.
17.199.5113.9At2g25735817115unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
17.199.590.7At3g01830820033calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBO.I.C.G.H.G.
17.199.538.9At3g59080825077aspartyl protease family proteinF:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFOO.I.C.G.H.G.
16.899.5131.3At4g23180828417CRK10 (CYSTEINE-RICH RLK10)Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)O.I.C.G.H.G.
16.899.563.9At5g66210836753CPK28member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
16.899.527.3At4g01090827898extra-large G-protein-relatedF:unknown;P:unknown;C:unknown;MPFOBVO.I.C.G.H.G.
16.699.548.0At3g11840820357PUB24 (PLANT U-BOX 24)Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.O.I.C.G.H.G.
16.399.544.0At3g26980822315MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;PFO.I.C.G.H.G.
16.399.531.3At5g64890836612PROPEP2 (Elicitor peptide 2 precursor)F:molecular_function unknown;P:response to jasmonic acid stimulus, defense response, incompatible interaction, response to salicylic acid stimulus;C:cellular_component unknown;PO.I.C.G.H.G.
16.299.5124.3At3g04640819622glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVAO.I.C.G.H.G.
16.199.597.4At2g35930818166PUB23 (PLANT U-BOX 23)Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.O.I.C.G.H.G.
16.099.542.3At2g27660817312DC1 domain-containing proteinF:zinc ion binding;P:unknown;C:chloroplast;BPMOFVAO.I.C.G.H.G.
16.099.529.4At1g79680844307wall-associated kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVAO.I.C.G.H.G.
15.999.575.5At1g26380839180FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMO.I.C.G.H.G.
15.999.563.4At3g09830820141protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
15.899.5166.2At5g44070834430CAD1 (CADMIUM SENSITIVE 1)Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+.O.I.C.G.H.G.
15.899.537.4At5g05190830401unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVO.I.C.G.H.G.
15.799.582.6At1g65390842851ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBO.I.C.G.H.G.
15.799.570.8At1g02400839508GA2OX6 (GIBBERELLIN 2-OXIDASE 6)Encodes a gibberellin 2-oxidase.O.I.C.G.H.G.
15.699.5193.4At1g19380838521unknown proteinF:unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
15.599.5176.5At2g38470818429WRKY33Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.O.I.C.G.H.G.
15.499.5108.3At2g37940818371-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPO.I.C.G.H.G.
15.499.524.2At2g35710818140glycogenin glucosyltransferase (glycogenin)-relatedF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process, biosynthetic process;C:endomembrane system;PMFOBVO.I.C.G.H.G.
15.399.427.4At1g49000841322unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
14.899.472.2At4g18880827622AT-HSFA4Amember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
14.799.487.0At4g39640830118GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1)The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.O.I.C.G.H.G.



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