Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-546-raw-cel-863289246
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
64.299.897.9At5g47330834780palmitoyl protein thioesterase family proteinF:palmitoyl-(protein) hydrolase activity;P:response to salt stress;C:endomembrane system;MPFOO.I.C.G.H.G.
43.999.843.8At2g36590818232ProT3 (PROLINE TRANSPORTER 3)Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed in leaves, flowers and siliques but to a much lesser extent in roots.O.I.C.G.H.G.
39.499.879.3At4g31870829316ATGPX7 (glutathione peroxidase 7)Encodes glutathione peroxidase.O.I.C.G.H.G.
27.899.742.6At4g15680827245glutaredoxin family proteinF:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;MPFOBO.I.C.G.H.G.
27.699.746.8At4g28140828929AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.O.I.C.G.H.G.
25.999.7116.4At3g48460824005GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:glycerol biosynthetic process, lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
25.599.720.8At3g14395820661unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
25.099.631.7At5g55570835651unknown proteinF:unknown;P:unknown;C:chloroplast;PMO.I.C.G.H.G.
24.699.6205.7At1g10370837576ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)F:glutathione transferase activity;P:response to water deprivation, toxin catabolic process;C:chloroplast, cytoplasm;BPOMFO.I.C.G.H.G.
22.099.6137.6At1g02820839304late embryogenesis abundant 3 family protein / LEA3 family proteinF:molecular_function unknown;P:embryonic development, response to stress;C:unknown;PO.I.C.G.H.G.
20.999.677.1At1g51090841532heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMVFO.I.C.G.H.G.
18.999.528.6At2g20880816622AP2 domain-containing transcription factor, putativeF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, cytoplasm;POMBFVO.I.C.G.H.G.
17.399.585.4At4g18280827554glycine-rich cell wall protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownO.I.C.G.H.G.
16.899.596.3At1g47400841144unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.499.5240.3At5g42650834273AOS (ALLENE OXIDE SYNTHASE)Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.O.I.C.G.H.G.
14.999.421.1At3g25570822144adenosylmethionine decarboxylase family proteinF:adenosylmethionine decarboxylase activity;P:spermidine biosynthetic process, spermine biosynthetic process;C:cellular_component unknown;PMFOBO.I.C.G.H.G.
14.999.411.2At4g22620828358auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
14.599.414.9At5g41900834195hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
14.199.4178.1At1g19450838529integral membrane protein, putative / sugar transporter family proteinF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, vacuole, membrane;BMFPOAVO.I.C.G.H.G.
13.699.421.6At1g602703767579-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
13.499.436.0At1g76130843945AMY2 (ALPHA-AMYLASE-LIKE 2)alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.O.I.C.G.H.G.
12.799.386.1At5g55050835596GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
12.299.3300.7At5g52310835307LTI78 (LOW-TEMPERATURE-INDUCED 78)cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expressionO.I.C.G.H.G.
11.699.327.1At3g09540820111pectate lyase family proteinF:lyase activity, pectate lyase activity;P:N-terminal protein myristoylation;C:unknown;BPFOO.I.C.G.H.G.
11.599.397.7At5g67370836872unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OBPO.I.C.G.H.G.
11.599.323.3At2g23130816845AGP17 (ARABINOGALACTAN PROTEIN 17)AGP17 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP18 and AGP19, other lysine-rich AGPs. 84% of its proline residues are hydroxylated to hydroproline and its heavy glycosylation accounts for appr. 69% of the molecular weight. The main glycosyl residues are arabinose (30.1%) and galactose (55.1%). Glycosyl linkages are consistent with type II arabinogalactans. AGP17 is predicted to have a glycosylphosphatidylinositol (GPI)anchor and is localized to the plasma membrane and Hechtian strands. It is expressed in young/old leaves, shoots, suspension cultures and flowers.O.I.C.G.H.G.
11.299.272.3At1g01610839297GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4)Encodes a protein with glycerol-3-phosphate acyltransferase activity. Involved in cutin assembly. Is functional redundant of GPAT8.O.I.C.G.H.G.
11.199.2495.9At3g23810821964SAHH2 (S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2)F:adenosylhomocysteinase activity, binding, catalytic activity;P:one-carbon compound metabolic process, metabolic process;C:plasma membrane, vacuole, membrane;OBMPAFO.I.C.G.H.G.
11.199.214.9At5g17450831611heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:unknown;PFBMO.I.C.G.H.G.
11.099.286.4At4g16370827332ATOPT3 (OLIGOPEPTIDE TRANSPORTER)Encodes an oligopeptide transporter involved in metal homeostasis.O.I.C.G.H.G.
10.999.292.9At1g06430837154FTSH8encodes a FtsH protease that is localized to the chloroplastO.I.C.G.H.G.
10.899.245.1At4g16590827360ATCSLA01encodes a gene similar to cellulose synthaseO.I.C.G.H.G.
10.699.246.6At2g34930818058disease resistance family proteinF:protein binding;P:signal transduction, defense response to fungus, defense response;C:cell wall;PMOBFAVO.I.C.G.H.G.
10.299.224.5At3g46670823820UGT76E11 (UDP-GLUCOSYL TRANSFERASE 76E11)F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
10.199.2113.8At5g53450835426ORG1 (OBP3-responsive gene 1)F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;PMOFBO.I.C.G.H.G.
9.899.121.4At5g44050834428MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
9.799.128.8At5g59130836031subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
9.699.1232.9At4g17090827419CT-BMY (CHLOROPLAST BETA-AMYLASE)Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).O.I.C.G.H.G.
9.699.1124.2At2g32240817784-F:molecular_function unknown;P:response to cadmium ion;C:plasma membrane;MOBFPAVO.I.C.G.H.G.
9.699.112.8At2g29090817457CYP707A2Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition.O.I.C.G.H.G.
9.599.1201.9At4g27520828861plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:in 6 components;MOFBPVAO.I.C.G.H.G.
9.599.139.9At5g59080836025unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:chloroplast;PO.I.C.G.H.G.
9.599.139.4At3g60980825270pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:response to oxidative stress;C:unknown;POO.I.C.G.H.G.
9.399.132.2At1g71710843501inositol polyphosphate 5-phosphatase, putativeF:inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MFPOVO.I.C.G.H.G.
9.199.133.2At4g15490827221UGT84A3Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.O.I.C.G.H.G.
8.999.029.3At3g48720824033transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
8.899.0175.4At1g50250841447FTSH1 (FtsH protease 1)encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.O.I.C.G.H.G.
8.799.045.9At1g20070838596unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
8.799.020.3At2g30540817603glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBOO.I.C.G.H.G.
8.799.012.9At5g40380834036protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
8.699.0207.4At4g34950829647nodulin family proteinF:unknown;P:unknown;C:unknown;OBPFAMO.I.C.G.H.G.



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