CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-475-raw-cel-680982449

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
219.9 100.0 200.6 At1g69260 843257 AFP1 (ABI FIVE BINDING PROTEIN) F:unknown;P:abscisic acid mediated signaling;C:nucleus;POMF O.I. C.G. H.G.
162.6 99.9 274.7 At5g13170 831156 SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29) F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOB O.I. C.G. H.G.
138.5 99.9 50.6 At2g29380 817487 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBV O.I. C.G. H.G.
137.8 99.9 60.9 At4g33905 829534 peroxisomal membrane protein 22 kDa, putative F:unknown;P:biological_process unknown;C:integral to membrane, peroxisomal membrane;MFPOV O.I. C.G. H.G.
116.1 99.9 344.2 At5g52300 835306 LTI65 (LOW-TEMPERATURE-INDUCED 65) encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi. O.I. C.G. H.G.
103.7 99.9 98.5 At4g40010 830162 SNRK2.7 (SNF1-RELATED PROTEIN KINASE 2.7) encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. O.I. C.G. H.G.
94.8 99.9 328.9 At2g47770 819389 benzodiazepine receptor-related F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BMOPAF O.I. C.G. H.G.
92.4 99.9 197.2 At5g11110 830979 ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F) Encodes a protein with putative sucrose-phosphate synthase activity.Involved in pollen exine formation. O.I. C.G. H.G.
83.9 99.9 237.7 At2g41190 818718 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPOFBAV O.I. C.G. H.G.
74.3 99.9 66.6 At1g05100 839324 MAPKKK18 member of MEKK subfamily O.I. C.G. H.G.
65.0 99.8 53.3 At1g49450 841369 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MFOBPA O.I. C.G. H.G.
64.4 99.8 75.7 At4g39210 830076 APL3 Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots. O.I. C.G. H.G.
62.9 99.8 123.9 At1g04220 839578 KCS2 (3-KETOACYL-COA SYNTHASE 2) Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
57.3 99.8 59.8 At1g09530 837479 PIF3 (PHYTOCHROME INTERACTING FACTOR 3) Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes. O.I. C.G. H.G.
57.2 99.8 241.5 At1g62570 842554 FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates O.I. C.G. H.G.
56.1 99.8 24.4 At4g28110 828927 AtMYB41 (myb domain protein 41) Member of the R2R3 factor gene family. Expression is induced in response to dessication, ABA and salt treatment. Overexpression of Myb41 results in abnormal cuticle development and decreased cell expansion. O.I. C.G. H.G.
55.9 99.8 101.7 At1g73390 843674 - F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PFM O.I. C.G. H.G.
55.2 99.8 46.8 At3g13672 820573 seven in absentia (SINA) family protein F:molecular_function unknown;P:multicellular organismal development, ubiquitin-dependent protein catabolic process;C:nucleus;MPO O.I. C.G. H.G.
55.1 99.8 108.9 At2g37770 818354 aldo/keto reductase family protein F:oxidoreductase activity;P:oxidation reduction;C:unknown;BOMFPA O.I. C.G. H.G.
51.4 99.8 44.7 At3g14440 820667 NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. O.I. C.G. H.G.
50.8 99.8 158.8 At5g59220 836040 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBV O.I. C.G. H.G.
50.7 99.8 292.9 At3g23920 821975 BAM1 (BETA-AMYLASE 1) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3. O.I. C.G. H.G.
47.0 99.8 57.1 At4g19230 827663 CYP707A1 Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy. O.I. C.G. H.G.
46.7 99.8 21.5 At5g24080 832473 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
44.8 99.8 136.2 At2g46680 819280 ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response. O.I. C.G. H.G.
43.3 99.8 47.8 At1g24600 839074 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
42.3 99.8 119.5 At3g29575 822619 AFP3 (ABI FIVE BINDING PROTEIN 3) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
39.8 99.8 24.9 At3g55090 824675 ATPase, coupled to transmembrane movement of substances F:ATPase activity, coupled to transmembrane movement of substances;P:response to cyclopentenone;C:membrane;BOMAFPV O.I. C.G. H.G.
38.3 99.8 156.4 At1g72770 843609 HAB1 (HOMOLOGY TO ABI1) mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C O.I. C.G. H.G.
37.6 99.7 186.1 At5g06760 830565 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy, embryonic development;C:cellular_component unknown;PMBOFV O.I. C.G. H.G.
37.6 99.7 109.3 At5g65990 836729 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPOFBAV O.I. C.G. H.G.
37.6 99.7 47.2 At5g50360 835103 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
37.4 99.7 55.0 At5g57050 835809 ABI2 (ABA INSENSITIVE 2) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo. O.I. C.G. H.G.
34.4 99.7 118.1 At2g33590 817925 cinnamoyl-CoA reductase family F:coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:response to cadmium ion, lignin biosynthetic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
34.4 99.7 81.6 At4g17280 827442 - F:unknown;P:multicellular organismal development;C:membrane;P O.I. C.G. H.G.
33.1 99.7 145.8 At4g30470 829170 cinnamoyl-CoA reductase-related F:coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, cellular metabolic process, metabolic process;C:cellular_component unknown;POBFMA O.I. C.G. H.G.
31.6 99.7 95.6 At1g07720 837286 KCS3 (3-KETOACYL-COA SYNTHASE 3) Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
31.5 99.7 33.3 At2g25620 817102 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVA O.I. C.G. H.G.
30.9 99.7 58.0 At3g08630 820010 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPBOFV O.I. C.G. H.G.
30.3 99.7 47.7 At1g19970 838586 ER lumen protein retaining receptor family protein F:ER retention sequence binding, receptor activity;P:protein retention in ER lumen, protein transport;C:integral to membrane;MOPF O.I. C.G. H.G.
30.0 99.7 111.9 At5g53970 835480 aminotransferase, putative encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment O.I. C.G. H.G.
29.4 99.7 296.1 At3g49220 824083 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
29.2 99.7 30.2 At1g15960 838166 NRAMP6 member of Nramp2 family O.I. C.G. H.G.
29.1 99.7 68.7 At4g17550 827470 transporter-related F:sugar:hydrogen symporter activity;P:carbohydrate transport;C:plasma membrane;BMFOPA O.I. C.G. H.G.
28.7 99.7 220.1 At1g61800 842477 GPT2 glucose6-Phosphate/phosphate transporter 2 O.I. C.G. H.G.
28.7 99.7 33.7 At5g62470 836367 MYB96 (myb domain protein 96) Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. O.I. C.G. H.G.
28.1 99.7 56.0 At4g02280 828081 SUS3 (sucrose synthase 3) Encodes a protein with sucrose synthase activity (SUS3). O.I. C.G. H.G.
27.7 99.7 138.2 At1g77450 844081 anac032 (Arabidopsis NAC domain containing protein 32) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
27.0 99.7 32.8 At3g62590 825433 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POFMB O.I. C.G. H.G.
26.5 99.7 73.9 At4g34000 829547 ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3) Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid. O.I. C.G. H.G.
26.3 99.7 35.4 At4g05100 825855 AtMYB74 (myb domain protein 74) Member of the R2R3 factor gene family. O.I. C.G. H.G.
26.1 99.7 292.1 At1g62510 842548 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFA O.I. C.G. H.G.
25.9 99.7 62.5 At1g07430 837255 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBV O.I. C.G. H.G.
25.7 99.7 35.2 At1g78610 844197 MSL6 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 6) F:unknown;P:unknown;C:plasma membrane, membrane;BOFAP O.I. C.G. H.G.
25.6 99.7 105.3 At3g61890 825362 ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems. O.I. C.G. H.G.
25.0 99.6 65.0 At4g23050 828404 protein kinase, putative F:protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent;C:unknown;MPOFBVA O.I. C.G. H.G.
23.8 99.6 95.3 At1g60190 842314 armadillo/beta-catenin repeat family protein / U-box domain-containing protein F:ubiquitin-protein ligase activity, protein binding, binding, zinc ion binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVA O.I. C.G. H.G.
23.5 99.6 161.2 At5g45950 834635 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
23.0 99.6 322.4 At1g52690 841701 late embryogenesis abundant protein, putative / LEA protein, putative F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PBMOFVA O.I. C.G. H.G.
22.7 99.6 116.5 At5g39050 833897 transferase/ transferase, transferring acyl groups other than amino-acyl groups F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
22.6 99.6 63.5 At2g25625 817103 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
22.2 99.6 22.7 At2g36770 818249 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMVBOF O.I. C.G. H.G.
22.2 99.6 13.1 At3g63060 825481 EDL3 (EID1-like 3) F:unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
22.0 99.6 27.2 At1g69480 843280 EXS family protein / ERD1/XPR1/SYG1 family protein F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOB O.I. C.G. H.G.
21.9 99.6 177.5 At4g26080 828714 ABI1 (ABA INSENSITIVE 1) Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure. O.I. C.G. H.G.
21.7 99.6 105.4 At2g37870 818363 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
21.6 99.6 18.4 At1g79900 844329 BAC2 encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol O.I. C.G. H.G.
21.3 99.6 292.3 At5g66400 836772 RAB18 (RESPONSIVE TO ABA 18) Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells. O.I. C.G. H.G.
20.8 99.6 103.2 At2g04350 814974 long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8) F:long-chain-fatty-acid-CoA ligase activity, catalytic activity;P:fatty acid biosynthetic process, metabolic process;C:endoplasmic reticulum;BOMFPAV O.I. C.G. H.G.
20.3 99.6 6.7 At1g72760 843608 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
20.2 99.6 201.5 At3g11410 820314 PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA) Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA. O.I. C.G. H.G.
20.1 99.6 78.1 At3g28007 822424 nodulin MtN3 family protein F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOB O.I. C.G. H.G.
20.1 99.6 70.1 At1g57590 842135 carboxylesterase F:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOB O.I. C.G. H.G.
20.0 99.6 96.1 At3g57010 824868 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;PMBOA O.I. C.G. H.G.
19.7 99.6 56.6 At1g51140 841537 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POFM O.I. C.G. H.G.
19.7 99.6 15.1 At4g09500 826534 glycosyltransferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMOBF O.I. C.G. H.G.
19.5 99.6 279.2 At3g02480 821185 ABA-responsive protein-related F:molecular_function unknown;P:response to water deprivation;C:cellular_component unknown;PMF O.I. C.G. H.G.
19.4 99.6 32.8 At1g27200 839609 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BPOFM O.I. C.G. H.G.
19.2 99.6 58.6 At1g66760 842994 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA O.I. C.G. H.G.
19.2 99.6 58.4 At5g39610 833957 ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6) Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510. O.I. C.G. H.G.
18.9 99.5 205.1 At3g22620 821833 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:chloroplast envelope;POBMFV O.I. C.G. H.G.
18.8 99.5 48.9 At3g10910 820261 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
18.7 99.5 72.4 At5g01520 831747 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPVF O.I. C.G. H.G.
18.4 99.5 288.1 At4g01870 828228 tolB protein-related F:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;OBPFAM O.I. C.G. H.G.
18.4 99.5 177.8 At1g10370 837576 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) F:glutathione transferase activity;P:response to water deprivation, toxin catabolic process;C:chloroplast, cytoplasm;BPOMF O.I. C.G. H.G.
18.4 99.5 85.8 At3g17000 820956 UBC32 (ubiquitin-conjugating enzyme 32) F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MFOPV O.I. C.G. H.G.
17.8 99.5 32.3 At2g45570 819165 CYP76C2 member of CYP76C O.I. C.G. H.G.
17.7 99.5 94.2 At3g10420 820206 sporulation protein-related F:nucleoside-triphosphatase activity, nucleotide binding;P:unknown;C:chloroplast;BOPAMF O.I. C.G. H.G.
17.2 99.5 104.9 At1g68570 843186 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF O.I. C.G. H.G.
17.2 99.5 45.2 At1g73885 843726 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;P O.I. C.G. H.G.
17.0 99.5 363.7 At4g34710 829623 ADC2 (ARGININE DECARBOXYLASE 2) encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1. O.I. C.G. H.G.
17.0 99.5 217.3 At2g39800 818566 P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. P5CS1 appears to be involved in salt stress responses related to proline accumulation, including protection from reactive oxidative species. P5CS1 appears to be present in different cells and/or different subcellular locations from P5CS2 in a tissue-dependent manner. O.I. C.G. H.G.
16.4 99.5 264.8 At4g27520 828861 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:in 6 components;MOFBPVA O.I. C.G. H.G.
16.4 99.5 94.0 At4g02940 828132 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:biological_process unknown;C:unknown;POMFB O.I. C.G. H.G.
16.3 99.5 51.5 At3g52340 824399 SPP2 (SUCROSE-6F-PHOSPHATE PHOSPHOHYDROLASE 2) sucrose-phosphatase (SPP2) O.I. C.G. H.G.
16.2 99.5 184.7 At4g27410 828849 RD26 (RESPONSIVE TO DESICCATION 26) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response. O.I. C.G. H.G.
16.2 99.5 87.1 At1g69295 843261 PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4) Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose. O.I. C.G. H.G.
16.0 99.5 102.4 At5g13750 831220 ZIFL1 (ZINC INDUCED FACILITATOR-like 1) F:tetracycline:hydrogen antiporter activity;P:response to antibiotic, tetracycline transport;C:integral to membrane;BFOMAP O.I. C.G. H.G.
16.0 99.5 45.0 At1g75170 843854 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein F:transporter activity;P:transport;C:unknown;MFPO O.I. C.G. H.G.
15.9 99.5 107.8 At2g22240 816757 MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2) ** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
219.9	100.0	200.6	At1g69260	843257	AFP1 (ABI FIVE BINDING PROTEIN)	F:unknown;P:abscisic acid mediated signaling;C:nucleus;POMF	O.I.	C.G.	H.G.
162.6	99.9	274.7	At5g13170	831156	SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29)	F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOB	O.I.	C.G.	H.G.
138.5	99.9	50.6	At2g29380	817487	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBV	O.I.	C.G.	H.G.
137.8	99.9	60.9	At4g33905	829534	peroxisomal membrane protein 22 kDa, putative	F:unknown;P:biological_process unknown;C:integral to membrane, peroxisomal membrane;MFPOV	O.I.	C.G.	H.G.
116.1	99.9	344.2	At5g52300	835306	LTI65 (LOW-TEMPERATURE-INDUCED 65)	encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.	O.I.	C.G.	H.G.
103.7	99.9	98.5	At4g40010	830162	SNRK2.7 (SNF1-RELATED PROTEIN KINASE 2.7)	encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.	O.I.	C.G.	H.G.
94.8	99.9	328.9	At2g47770	819389	benzodiazepine receptor-related	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BMOPAF	O.I.	C.G.	H.G.
92.4	99.9	197.2	At5g11110	830979	ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F)	Encodes a protein with putative sucrose-phosphate synthase activity.Involved in pollen exine formation.	O.I.	C.G.	H.G.
83.9	99.9	237.7	At2g41190	818718	amino acid transporter family protein	F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPOFBAV	O.I.	C.G.	H.G.
74.3	99.9	66.6	At1g05100	839324	MAPKKK18	member of MEKK subfamily	O.I.	C.G.	H.G.
65.0	99.8	53.3	At1g49450	841369	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MFOBPA	O.I.	C.G.	H.G.
64.4	99.8	75.7	At4g39210	830076	APL3	Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.	O.I.	C.G.	H.G.
62.9	99.8	123.9	At1g04220	839578	KCS2 (3-KETOACYL-COA SYNTHASE 2)	Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
57.3	99.8	59.8	At1g09530	837479	PIF3 (PHYTOCHROME INTERACTING FACTOR 3)	Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.	O.I.	C.G.	H.G.
57.2	99.8	241.5	At1g62570	842554	FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4)	belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates	O.I.	C.G.	H.G.
56.1	99.8	24.4	At4g28110	828927	AtMYB41 (myb domain protein 41)	Member of the R2R3 factor gene family. Expression is induced in response to dessication, ABA and salt treatment. Overexpression of Myb41 results in abnormal cuticle development and decreased cell expansion.	O.I.	C.G.	H.G.
55.9	99.8	101.7	At1g73390	843674	-	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PFM	O.I.	C.G.	H.G.
55.2	99.8	46.8	At3g13672	820573	seven in absentia (SINA) family protein	F:molecular_function unknown;P:multicellular organismal development, ubiquitin-dependent protein catabolic process;C:nucleus;MPO	O.I.	C.G.	H.G.
55.1	99.8	108.9	At2g37770	818354	aldo/keto reductase family protein	F:oxidoreductase activity;P:oxidation reduction;C:unknown;BOMFPA	O.I.	C.G.	H.G.
51.4	99.8	44.7	At3g14440	820667	NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3)	Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane.	O.I.	C.G.	H.G.
50.8	99.8	158.8	At5g59220	836040	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBV	O.I.	C.G.	H.G.
50.7	99.8	292.9	At3g23920	821975	BAM1 (BETA-AMYLASE 1)	Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.	O.I.	C.G.	H.G.
47.0	99.8	57.1	At4g19230	827663	CYP707A1	Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.	O.I.	C.G.	H.G.
46.7	99.8	21.5	At5g24080	832473	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
44.8	99.8	136.2	At2g46680	819280	ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)	encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.	O.I.	C.G.	H.G.
43.3	99.8	47.8	At1g24600	839074	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
42.3	99.8	119.5	At3g29575	822619	AFP3 (ABI FIVE BINDING PROTEIN 3)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
39.8	99.8	24.9	At3g55090	824675	ATPase, coupled to transmembrane movement of substances	F:ATPase activity, coupled to transmembrane movement of substances;P:response to cyclopentenone;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
38.3	99.8	156.4	At1g72770	843609	HAB1 (HOMOLOGY TO ABI1)	mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C	O.I.	C.G.	H.G.
37.6	99.7	186.1	At5g06760	830565	late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy, embryonic development;C:cellular_component unknown;PMBOFV	O.I.	C.G.	H.G.
37.6	99.7	109.3	At5g65990	836729	amino acid transporter family protein	F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPOFBAV	O.I.	C.G.	H.G.
37.6	99.7	47.2	At5g50360	835103	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
37.4	99.7	55.0	At5g57050	835809	ABI2 (ABA INSENSITIVE 2)	Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.	O.I.	C.G.	H.G.
34.4	99.7	118.1	At2g33590	817925	cinnamoyl-CoA reductase family	F:coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:response to cadmium ion, lignin biosynthetic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
34.4	99.7	81.6	At4g17280	827442	-	F:unknown;P:multicellular organismal development;C:membrane;P	O.I.	C.G.	H.G.
33.1	99.7	145.8	At4g30470	829170	cinnamoyl-CoA reductase-related	F:coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, cellular metabolic process, metabolic process;C:cellular_component unknown;POBFMA	O.I.	C.G.	H.G.
31.6	99.7	95.6	At1g07720	837286	KCS3 (3-KETOACYL-COA SYNTHASE 3)	Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
31.5	99.7	33.3	At2g25620	817102	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVA	O.I.	C.G.	H.G.
30.9	99.7	58.0	At3g08630	820010	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPBOFV	O.I.	C.G.	H.G.
30.3	99.7	47.7	At1g19970	838586	ER lumen protein retaining receptor family protein	F:ER retention sequence binding, receptor activity;P:protein retention in ER lumen, protein transport;C:integral to membrane;MOPF	O.I.	C.G.	H.G.
30.0	99.7	111.9	At5g53970	835480	aminotransferase, putative	encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment	O.I.	C.G.	H.G.
29.4	99.7	296.1	At3g49220	824083	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
29.2	99.7	30.2	At1g15960	838166	NRAMP6	member of Nramp2 family	O.I.	C.G.	H.G.
29.1	99.7	68.7	At4g17550	827470	transporter-related	F:sugar:hydrogen symporter activity;P:carbohydrate transport;C:plasma membrane;BMFOPA	O.I.	C.G.	H.G.
28.7	99.7	220.1	At1g61800	842477	GPT2	glucose6-Phosphate/phosphate transporter 2	O.I.	C.G.	H.G.
28.7	99.7	33.7	At5g62470	836367	MYB96 (myb domain protein 96)	Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid.	O.I.	C.G.	H.G.
28.1	99.7	56.0	At4g02280	828081	SUS3 (sucrose synthase 3)	Encodes a protein with sucrose synthase activity (SUS3).	O.I.	C.G.	H.G.
27.7	99.7	138.2	At1g77450	844081	anac032 (Arabidopsis NAC domain containing protein 32)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
27.0	99.7	32.8	At3g62590	825433	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POFMB	O.I.	C.G.	H.G.
26.5	99.7	73.9	At4g34000	829547	ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3)	Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.	O.I.	C.G.	H.G.
26.3	99.7	35.4	At4g05100	825855	AtMYB74 (myb domain protein 74)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
26.1	99.7	292.1	At1g62510	842548	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFA	O.I.	C.G.	H.G.
25.9	99.7	62.5	At1g07430	837255	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBV	O.I.	C.G.	H.G.
25.7	99.7	35.2	At1g78610	844197	MSL6 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 6)	F:unknown;P:unknown;C:plasma membrane, membrane;BOFAP	O.I.	C.G.	H.G.
25.6	99.7	105.3	At3g61890	825362	ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.	O.I.	C.G.	H.G.
25.0	99.6	65.0	At4g23050	828404	protein kinase, putative	F:protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent;C:unknown;MPOFBVA	O.I.	C.G.	H.G.
23.8	99.6	95.3	At1g60190	842314	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	F:ubiquitin-protein ligase activity, protein binding, binding, zinc ion binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVA	O.I.	C.G.	H.G.
23.5	99.6	161.2	At5g45950	834635	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
23.0	99.6	322.4	At1g52690	841701	late embryogenesis abundant protein, putative / LEA protein, putative	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PBMOFVA	O.I.	C.G.	H.G.
22.7	99.6	116.5	At5g39050	833897	transferase/ transferase, transferring acyl groups other than amino-acyl groups	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
22.6	99.6	63.5	At2g25625	817103	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
22.2	99.6	22.7	At2g36770	818249	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMVBOF	O.I.	C.G.	H.G.
22.2	99.6	13.1	At3g63060	825481	EDL3 (EID1-like 3)	F:unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
22.0	99.6	27.2	At1g69480	843280	EXS family protein / ERD1/XPR1/SYG1 family protein	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOB	O.I.	C.G.	H.G.
21.9	99.6	177.5	At4g26080	828714	ABI1 (ABA INSENSITIVE 1)	Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure.	O.I.	C.G.	H.G.
21.7	99.6	105.4	At2g37870	818363	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
21.6	99.6	18.4	At1g79900	844329	BAC2	encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol	O.I.	C.G.	H.G.
21.3	99.6	292.3	At5g66400	836772	RAB18 (RESPONSIVE TO ABA 18)	Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.	O.I.	C.G.	H.G.
20.8	99.6	103.2	At2g04350	814974	long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8)	F:long-chain-fatty-acid-CoA ligase activity, catalytic activity;P:fatty acid biosynthetic process, metabolic process;C:endoplasmic reticulum;BOMFPAV	O.I.	C.G.	H.G.
20.3	99.6	6.7	At1g72760	843608	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
20.2	99.6	201.5	At3g11410	820314	PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)	Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.	O.I.	C.G.	H.G.
20.1	99.6	78.1	At3g28007	822424	nodulin MtN3 family protein	F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOB	O.I.	C.G.	H.G.
20.1	99.6	70.1	At1g57590	842135	carboxylesterase	F:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOB	O.I.	C.G.	H.G.
20.0	99.6	96.1	At3g57010	824868	strictosidine synthase family protein	F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;PMBOA	O.I.	C.G.	H.G.
19.7	99.6	56.6	At1g51140	841537	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POFM	O.I.	C.G.	H.G.
19.7	99.6	15.1	At4g09500	826534	glycosyltransferase family protein	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMOBF	O.I.	C.G.	H.G.
19.5	99.6	279.2	At3g02480	821185	ABA-responsive protein-related	F:molecular_function unknown;P:response to water deprivation;C:cellular_component unknown;PMF	O.I.	C.G.	H.G.
19.4	99.6	32.8	At1g27200	839609	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BPOFM	O.I.	C.G.	H.G.
19.2	99.6	58.6	At1g66760	842994	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA	O.I.	C.G.	H.G.
19.2	99.6	58.4	At5g39610	833957	ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6)	Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.	O.I.	C.G.	H.G.
18.9	99.5	205.1	At3g22620	821833	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:chloroplast envelope;POBMFV	O.I.	C.G.	H.G.
18.8	99.5	48.9	At3g10910	820261	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
18.7	99.5	72.4	At5g01520	831747	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPVF	O.I.	C.G.	H.G.
18.4	99.5	288.1	At4g01870	828228	tolB protein-related	F:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;OBPFAM	O.I.	C.G.	H.G.
18.4	99.5	177.8	At1g10370	837576	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	F:glutathione transferase activity;P:response to water deprivation, toxin catabolic process;C:chloroplast, cytoplasm;BPOMF	O.I.	C.G.	H.G.
18.4	99.5	85.8	At3g17000	820956	UBC32 (ubiquitin-conjugating enzyme 32)	F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MFOPV	O.I.	C.G.	H.G.
17.8	99.5	32.3	At2g45570	819165	CYP76C2	member of CYP76C	O.I.	C.G.	H.G.
17.7	99.5	94.2	At3g10420	820206	sporulation protein-related	F:nucleoside-triphosphatase activity, nucleotide binding;P:unknown;C:chloroplast;BOPAMF	O.I.	C.G.	H.G.
17.2	99.5	104.9	At1g68570	843186	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF	O.I.	C.G.	H.G.
17.2	99.5	45.2	At1g73885	843726	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;P	O.I.	C.G.	H.G.
17.0	99.5	363.7	At4g34710	829623	ADC2 (ARGININE DECARBOXYLASE 2)	encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.	O.I.	C.G.	H.G.
17.0	99.5	217.3	At2g39800	818566	P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1)	encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. P5CS1 appears to be involved in salt stress responses related to proline accumulation, including protection from reactive oxidative species. P5CS1 appears to be present in different cells and/or different subcellular locations from P5CS2 in a tissue-dependent manner.	O.I.	C.G.	H.G.
16.4	99.5	264.8	At4g27520	828861	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:in 6 components;MOFBPVA	O.I.	C.G.	H.G.
16.4	99.5	94.0	At4g02940	828132	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity;P:biological_process unknown;C:unknown;POMFB	O.I.	C.G.	H.G.
16.3	99.5	51.5	At3g52340	824399	SPP2 (SUCROSE-6F-PHOSPHATE PHOSPHOHYDROLASE 2)	sucrose-phosphatase (SPP2)	O.I.	C.G.	H.G.
16.2	99.5	184.7	At4g27410	828849	RD26 (RESPONSIVE TO DESICCATION 26)	Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.	O.I.	C.G.	H.G.
16.2	99.5	87.1	At1g69295	843261	PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4)	Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.	O.I.	C.G.	H.G.
16.0	99.5	102.4	At5g13750	831220	ZIFL1 (ZINC INDUCED FACILITATOR-like 1)	F:tetracycline:hydrogen antiporter activity;P:response to antibiotic, tetracycline transport;C:integral to membrane;BFOMAP	O.I.	C.G.	H.G.
16.0	99.5	45.0	At1g75170	843854	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	F:transporter activity;P:transport;C:unknown;MFPO	O.I.	C.G.	H.G.
15.9	99.5	107.8	At2g22240	816757	MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2)	** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-475-raw-cel-680982449
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-475-raw-cel-680982449 GSE experiment -

GSM ID -

Assay name E-MEXP-475-raw-cel-680982449

GSE experiment -