Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-449-raw-cel-676423362
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
513.4100.0147.3At5g64230836544unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMO.I.C.G.H.G.
166.0100.066.7At4g25380828641zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.
164.8100.0138.8At1g71000843439heat shock protein bindingF:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
127.699.9137.9At5g20910832215zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:nucleus;PMOFVO.I.C.G.H.G.
123.699.9145.2At3g17611821028ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14)F:zinc ion binding;P:biological_process unknown;C:integral to membrane, intracellular;BOPMFAVO.I.C.G.H.G.
120.499.978.2At1g22985838906AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.O.I.C.G.H.G.
109.199.936.4At5g46080834649protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
100.099.9186.2At3g28210822447PMZEncodes a putative zinc finger protein (PMZ).O.I.C.G.H.G.
80.399.955.6At2g38340818414AP2 domain-containing transcription factor, putative (DRE2B)encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.O.I.C.G.H.G.
78.299.9230.8At4g25200828623ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrialO.I.C.G.H.G.
75.899.9146.9At5g62520836372SRO5 (SIMILAR TO RCD ONE 5)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.O.I.C.G.H.G.
72.199.964.7At1g23550838965SRO2 (SIMILAR TO RCD ONE 2)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.H.G.
71.499.9128.8At4g03320827972tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV)F:unknown;P:unknown;C:unknown;PBO.I.C.G.H.G.
66.399.8119.3At2g37770818354aldo/keto reductase family proteinF:oxidoreductase activity;P:oxidation reduction;C:unknown;BOMFPAO.I.C.G.H.G.
65.699.837.0At3g09480820105histone H2B, putativeF:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;MPOFO.I.C.G.H.G.
65.499.8231.1At3g09350820091armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
62.399.846.7At2g40340818627AP2 domain-containing transcription factor, putative (DRE2B)encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.O.I.C.G.H.G.
60.399.8298.7At1g5354084178917.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMO.I.C.G.H.G.
60.099.816.3At1g66570842975ATSUC7 (Sucrose-proton symporter 7)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity;P:transport, sucrose transport;C:integral to membrane, integral to plasma membrane, membrane;BMOPFAO.I.C.G.H.G.
54.499.867.2At3g04000819555short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAVO.I.C.G.H.G.
52.699.879.8At3g01650819911RGLG1 (RING domain Ligase1)F:protein binding, zinc ion binding;P:N-terminal protein myristoylation, cytokinin metabolic process, auxin metabolic process;C:plasma membrane;MOPFBVAO.I.C.G.H.G.
50.199.8258.1At4g37990829955ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity.O.I.C.G.H.G.
49.099.8351.2At3g46230823768ATHSP17.4member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seedsO.I.C.G.H.G.
48.499.8172.1At4g36010829757pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOVO.I.C.G.H.G.
48.299.890.1At1g21550838756calcium-binding protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBO.I.C.G.H.G.
47.899.8145.6At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMO.I.C.G.H.G.
47.799.8125.2At2g02000814731GAD3 (glutamate decarboxylase 3)F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAVO.I.C.G.H.G.
47.199.8268.0At2g2950081749917.6 kDa class I small heat shock protein (HSP17.6B-CI)F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
46.299.8159.7At3g53230824489cell division cycle protein 48, putative / CDC48, putativeF:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAVO.I.C.G.H.G.
43.799.881.1At2g35900818163unknown proteinF:molecular_function unknown;P:biological_process unknown;C:nucleus;PO.I.C.G.H.G.
43.599.883.4At4g31870829316ATGPX7 (glutathione peroxidase 7)Encodes glutathione peroxidase.O.I.C.G.H.G.
39.699.855.4At5g56090835708COX15 (cytochrome c oxidase 15)Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.O.I.C.G.H.G.
39.499.820.1At1g49150841338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
39.099.899.6At5g58770835991dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putativeF:dehydrodolichyl diphosphate synthase activity;P:dolichol biosynthetic process;C:chloroplast;OBAFMPO.I.C.G.H.G.
38.899.838.0At1g20350838623ATTIM17-1mitochondrial inner membrane translocaseO.I.C.G.H.G.
37.699.793.0At2g23910816923cinnamoyl-CoA reductase-relatedF:coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, cellular metabolic process, metabolic process;C:cellular_component unknown;POBFMO.I.C.G.H.G.
37.499.7117.6At5g18400831958unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MFOPO.I.C.G.H.G.
37.299.741.2At3g54130824580josephin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFO.I.C.G.H.G.
36.799.7115.2At1g09140837433SF2/ASF-like splicing modulator (SRP30)Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.O.I.C.G.H.G.
35.999.761.5At2g41040818703methyltransferase-relatedF:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFMO.I.C.G.H.G.
35.799.7163.9At5g12020831075HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMO.I.C.G.H.G.
35.199.766.1At1g09500837475cinnamyl-alcohol dehydrogenase family / CAD familysimilar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenaseO.I.C.G.H.G.
33.899.749.1At3g54950824660PLA IIIA (PATATIN-LIKE PROTEIN 6)F:unknown;P:response to other organism;C:unknown;PBOFMO.I.C.G.H.G.
33.699.748.3At5g22860832349serine carboxypeptidase S28 family proteinF:serine-type peptidase activity, peptidase activity;P:proteolysis;C:endomembrane system;MOFPBO.I.C.G.H.G.
33.299.7175.8At4g37370829891CYP81D8member of CYP81DO.I.C.G.H.G.
33.199.7211.7At1g16030838174Hsp70b (heat shock protein 70B)F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVAO.I.C.G.H.G.
31.699.784.9At1g32940840188SBT3.5F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFMO.I.C.G.H.G.
31.599.7143.9At5g25450832619ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeF:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFOO.I.C.G.H.G.
31.399.7238.7At1g0740083725217.8 kDa class I heat shock protein (HSP17.8-CI)F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAMO.I.C.G.H.G.
31.399.792.2At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.O.I.C.G.H.G.
31.399.759.8At2g03430814872ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cell wall;MOFBPVAO.I.C.G.H.G.
31.099.7109.9At2g29350817484SAG13senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenaseO.I.C.G.H.G.
31.099.791.4At1g03070839581glutamate bindingF:glutamate binding;P:biological_process unknown;C:cellular_component unknown;BOMPFVO.I.C.G.H.G.
30.199.722.6At5g43860834408ATCLH2Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.O.I.C.G.H.G.
30.099.7235.3At5g12030831076AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.O.I.C.G.H.G.
29.899.718.9At5g39090833901transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFOO.I.C.G.H.G.
28.799.7131.2At5g39050833897transferase/ transferase, transferring acyl groups other than amino-acyl groupsF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
28.599.754.0At1g08315837352armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;PMOFO.I.C.G.H.G.
27.699.752.5At3g23605821940UBX domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMO.I.C.G.H.G.
27.099.716.5At3g16360820883AHP4 (HPT PHOSPHOTRANSMITTER 4)Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).O.I.C.G.H.G.
26.899.754.4At1g79410844279AtOCT5 (Arabidopsis thaliana ORGANIC CATION/CARNITINE TRANSPORTER5)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport;C:integral to membrane, membrane;MBFPOAO.I.C.G.H.G.
26.699.7140.9At3g21560821710UGT84A2Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid).O.I.C.G.H.G.
26.399.739.9At4g24000828500ATCSLG2encodes a protein similar to cellulose synthaseO.I.C.G.H.G.
26.099.770.8At3g22160821780VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBVO.I.C.G.H.G.
26.099.761.4At4g25390828642protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.C.G.H.G.
25.899.7180.8At4g11570826761haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;BOPMAFO.I.C.G.H.G.
25.899.7157.0At3g04640819622glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVAO.I.C.G.H.G.
25.899.7109.3At1g57630842139disease resistance protein (TIR class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
25.699.755.2At3g62770825452AtATG18aRequired for autophagosome formation during nutrient deprivation and senescence.O.I.C.G.H.G.
24.999.672.1At5g35320833486unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
24.899.6132.0At4g33660829507unknown proteinF:unknown;P:unknown;C:unknown;MPOFBVAO.I.C.G.H.G.
24.899.647.0At4g04800825817methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:nucleus;OBMPFAVO.I.C.G.H.G.
24.699.649.6At4g17650827485aromatic-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOMFPVO.I.C.G.H.G.
24.599.627.1At3g16330820880unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
24.199.665.1At5g65300836655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
24.099.611.9At1g77570844092DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:endomembrane system, nucleus;PMOFO.I.C.G.H.G.
23.999.668.0At3g11270820298MEE34 (maternal effect embryo arrest 34)F:molecular_function unknown;P:embryonic development ending in seed dormancy, protein catabolic process, ubiquitin-dependent protein catabolic process;C:nucleus, proteasome regulatory particle, lid subcomplex;MFPOO.I.C.G.H.G.
23.999.667.9At2g27580817304zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.
23.999.653.7At4g15490827221UGT84A3Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.O.I.C.G.H.G.
23.799.624.4At4g11660826771AT-HSFB2Bmember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
23.299.6215.8At3g07090819895unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
23.299.633.9At3g04060819561anac046 (Arabidopsis NAC domain containing protein 46)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
22.899.620.3At3g03440821253armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:chloroplast;PMFOBO.I.C.G.H.G.
22.099.640.1At1g26390839181FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAMO.I.C.G.H.G.
21.999.651.1At3g53970824564proteasome inhibitor-relatedF:molecular_function unknown;P:unknown;C:unknown;MFOBPVAO.I.C.G.H.G.
21.999.620.3At1g24090839020RNase H domain-containing proteinF:ribonuclease H activity, nucleic acid binding;P:biological_process unknown;C:unknown;PBOAMO.I.C.G.H.G.
21.799.6157.7At4g10040826595CYTC-2 (cytochrome c-2)Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.O.I.C.G.H.G.
21.799.689.4At5g17860831654CAX7 (calcium exchanger 7)F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPAO.I.C.G.H.G.
21.599.657.1At1g67970843125AT-HSFA8member of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
21.399.659.7At1g55310841976SR33Encodes a SR spliceosome protein that is localized to nuclear specks, interacts with SR45 and the U1-70K protein of the U1 snRNP, has sequence similar to human SC35 protein.O.I.C.G.H.G.
21.299.679.0At2g34810818046FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to jasmonic acid stimulus, response to wounding;C:endomembrane system;FBPOAMO.I.C.G.H.G.
21.199.6158.2At5g03030831703DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding;P:protein folding;C:unknown;OMFBPVO.I.C.G.H.G.
21.199.664.9At1g17870838366EGY3 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3)S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.O.I.C.G.H.G.
21.099.6108.1At5g62540836374UBC3 (ubiquitin-conjugating enzyme 3)Encodes a protein predicted to be an E2 ubiquitin conjugating enzyme. It appears homologous to the RAD6 protein in yeast implicated in histone ubiquitination, but, UBC3 has not been experimentally associated with this process.O.I.C.G.H.G.
20.799.6232.3At3g27380822359SDH2-1One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.O.I.C.G.H.G.
20.699.6123.5At2g19310816448-F:molecular_function unknown;P:response to oxidative stress, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;PFOO.I.C.G.H.G.
20.699.650.5At2g27490817294ATCOAEAT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.O.I.C.G.H.G.
20.599.626.8At1g66080842922unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
20.499.6136.6At1g13990837959unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
20.499.6131.7At5g59720836093HSP18.2 (heat shock protein 18.2)encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.O.I.C.G.H.G.



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