Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1799-raw-cel-1665601115
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
124.399.9174.9At3g30720822807QQS (QUA-QUINE STARCH)F:molecular_function unknown;P:starch biosynthetic process;C:cytosol;PO.I.C.G.H.G.
57.999.8279.9At4g03060828102AOP2 (ALKENYL HYDROXALKYL PRODUCING 2)Encodes a truncated and null function protein, due to a 5-bp deletion in cDNA. The functional allele in ecotype Cvi, AOP2, encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of alkenyl glucosinolate among different ecotypes of Arabidopsis.O.I.C.G.H.G.
40.599.869.3At3g03190821227ATGSTF11 (GLUTATHIONE S-TRANSFERASE F11)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
37.799.725.0At5g61290836250flavin-containing monooxygenase family protein / FMO family proteinF:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:cellular_component unknown;BOMFPAO.I.C.G.H.G.
31.699.732.7At5g51600835234PLE (PLEIADE)Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.O.I.C.G.H.G.
29.099.720.0At5g41660834168unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
26.799.737.5At5g07690830662ATMYB29 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 29)Encodes a putative transcription factor (MYB29).O.I.C.G.H.G.
26.399.743.8At1g16400838210CYP79F2Encodes cytochrome P450 CYP79F2.O.I.C.G.H.G.
24.899.612.0At3g297873769052transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
22.199.650.6At3g17680821035-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBFO.I.C.G.H.G.
21.999.6245.0At4g22490828344protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
21.599.632.2At3g13175820507unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
21.099.620.1At1g34245840324-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
20.899.640.7At4g02850828160phenazine biosynthesis PhzC/PhzF family proteinF:catalytic activity;P:biosynthetic process;C:endomembrane system;BOMFPAO.I.C.G.H.G.
20.899.637.9At4g05520825902ATEHD2 (EPS15 HOMOLOGY DOMAIN 2)Encodes AtEHD2, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD1, At3g20290).O.I.C.G.H.G.
20.699.630.4At1g06100837119fatty acid desaturase family proteinF:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPVO.I.C.G.H.G.
20.199.629.3At4g02800828171unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFBPVAO.I.C.G.H.G.
20.199.624.9At1g74890843828ARR15 (RESPONSE REGULATOR 15)Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment.O.I.C.G.H.G.
20.199.624.1At3g21300821684RNA methyltransferase family proteinF:methyltransferase activity, RNA binding, RNA methyltransferase activity;P:RNA processing;C:unknown;BOMFAPVO.I.C.G.H.G.
18.599.520.2At3g28130822437nodulin MtN21 family proteinF:unknown;P:biological_process unknown;C:membrane;PBOMAO.I.C.G.H.G.
18.499.523.9At5g45700834609NLI interacting factor (NIF) family proteinF:phosphatase activity;P:unknown;C:unknown;MOFPVBO.I.C.G.H.G.
17.599.5131.2At3g58990825068aconitase C-terminal domain-containing proteinF:hydro-lyase activity, 3-isopropylmalate dehydratase activity;P:leucine biosynthetic process, metabolic process;C:3-isopropylmalate dehydratase complex, chloroplast;BOFAPMO.I.C.G.H.G.
17.399.523.5At5g62550836375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMBFPVAO.I.C.G.H.G.
16.999.510.5At5g55820835676unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAO.I.C.G.H.G.
16.699.531.1At4g30720829195electron carrier/ oxidoreductaseF:electron carrier activity, oxidoreductase activity;P:unknown;C:chloroplast;BOAPFO.I.C.G.H.G.
16.399.58.7At3g50890824253AtHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PO.I.C.G.H.G.
15.899.5194.7At1g27540839645F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
15.699.515.1At1g59540842245ZCF125Encodes a kinesin-like protein.O.I.C.G.H.G.
15.599.55.3At5g35760833555beta-galactosidaseF:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;PO.I.C.G.H.G.
15.499.526.1At1g33170840213dehydration-responsive family proteinF:unknown;P:biological_process unknown;C:unknown;PBOAMO.I.C.G.H.G.
15.399.4140.4At4g22870828386leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putativeF:oxidoreductase activity;P:unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
15.399.450.8At3g14190820636unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
14.999.425.8At5g64110836532peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:membrane;PFOBO.I.C.G.H.G.
14.699.449.3At1g31710840058copper amine oxidase, putativeF:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAO.I.C.G.H.G.
14.699.439.4At5g25090832580plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PO.I.C.G.H.G.
14.499.413.9At2g45080819115cycp3F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:cellular_component unknown;FOMPBO.I.C.G.H.G.
14.199.415.4At5g55520835646-F:unknown;P:biological_process unknown;C:unknown;MOBFPAVO.I.C.G.H.G.
13.799.428.9At3g52110824374unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBO.I.C.G.H.G.
13.699.438.7At3g19590821496WD-40 repeat family protein / mitotic checkpoint protein, putativeF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MBFOPAO.I.C.G.H.G.
13.699.431.4At3g02120821311hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;PO.I.C.G.H.G.
13.499.421.4At1g602703767579-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
13.299.414.3At1g72670843599iqd8 (IQ-domain 8)F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMFOO.I.C.G.H.G.
13.299.413.2At2g37380818314unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBO.I.C.G.H.G.
12.699.395.6At5g16250831485unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
12.599.313.0At3g20150821558kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex, chloroplast;MOFPBAVO.I.C.G.H.G.
12.499.346.2At4g30620829185unknown proteinF:unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;BOPO.I.C.G.H.G.
12.399.3140.1At5g08000830694E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.O.I.C.G.H.G.
12.399.381.4At2g25060817044plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PO.I.C.G.H.G.
12.299.352.3At1g62560842553FMO GS-OX3 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 3)belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolatesO.I.C.G.H.G.
12.299.342.4At1g07780837292PAI1 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1)Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.O.I.C.G.H.G.
12.299.336.6At3g22880821860DMC1 (DISRUPTION OF MEIOTIC CONTROL 1)Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene.O.I.C.G.H.G.
12.199.318.5At1g76310843964CYCB2core cell cycle genesO.I.C.G.H.G.
11.899.3170.9At4g30140829137GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
11.899.335.1At3g12870820470unknown proteinF:unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.899.313.6At1g21810838784-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
11.899.310.6At3g25905822187CLE27 (CLAVATA3/ESR-RELATED 27)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.O.I.C.G.H.G.
11.499.317.4At4g11080826709high mobility group (HMG1/2) family proteinF:transcription factor activity;P:unknown;C:nucleus, chloroplast;MOBFPAVO.I.C.G.H.G.
11.499.38.9At3g12890820472ASML2 (ACTIVATOR OF SPOMIN::LUC2)Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes.O.I.C.G.H.G.
11.399.333.1At5g44560834483VPS2.2F:unknown;P:vesicle-mediated transport;C:ESCRT III complex;MPFOBO.I.C.G.H.G.
11.399.320.2At3g06740819859zinc finger (GATA type) family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFMOO.I.C.G.H.G.
11.299.272.6At4g12030826811bile acid:sodium symporter family proteinF:transporter activity, bile acid:sodium symporter activity;P:sodium ion transport;C:membrane;OBMPAO.I.C.G.H.G.
11.299.217.4At4g03100828092rac GTPase activating protein, putativeF:Rac GTPase activator activity;P:signal transduction;C:intracellular;MOFPO.I.C.G.H.G.
11.199.224.5At1g78430844179-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
11.099.246.5At4g34160829564CYCD3encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.O.I.C.G.H.G.
11.099.220.5At3g21950821753methyltransferaseF:methyltransferase activity;P:response to cadmium ion;C:cellular_component unknown;POBMFO.I.C.G.H.G.
10.999.218.8At4g05190825867ATK5 (ARABIDOPSIS THALIANA KINESIN 5)ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts.O.I.C.G.H.G.
10.999.217.5At4g01130828207acetylesterase, putativeF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
10.599.27.3At4g28430828960reticulon family proteinF:unknown;P:biological_process unknown;C:endoplasmic reticulum, chloroplast;MPOFO.I.C.G.H.G.
10.499.229.6At3g25940822191transcription factor S-II (TFIIS) domain-containing proteinF:transcription factor activity, transcription regulator activity, DNA binding, zinc ion binding, nucleic acid binding;P:RNA elongation, regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MFOAPVO.I.C.G.H.G.
10.399.230.4At5g37010833671unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;MOFBPVAO.I.C.G.H.G.
10.399.215.2At4g35620829714CYCB2F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFVBO.I.C.G.H.G.
10.399.27.3At2g39680--O.I.C.G.H.G.
10.399.27.0At1g32730840167unknown proteinF:unknown;P:unknown;C:chloroplast;MPOBFO.I.C.G.H.G.
10.099.253.3At3g53900824557uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putativeF:uracil phosphoribosyltransferase activity;P:uracil salvage, nucleoside metabolic process;C:chloroplast;BOFMPAO.I.C.G.H.G.
10.099.242.4At3g23890821972TOPII (TOPOISOMERASE II)Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.O.I.C.G.H.G.
10.099.230.2At5g13840831230FZR3 (FIZZY-RELATED 3)F:signal transducer activity;P:signal transduction;C:chloroplast, heterotrimeric G-protein complex;MFBOPAO.I.C.G.H.G.
10.099.210.3At2g41340818732RPB5D (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, D)NRPE5-like protein of unknown function; homologous to budding yeast RPB5O.I.C.G.H.G.
9.899.193.4At3g14220820640GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBOFMO.I.C.G.H.G.
9.899.174.0At5g61130836234PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1)Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose.O.I.C.G.H.G.
9.799.142.6At1g53070841741legume lectin family proteinF:carbohydrate binding, sugar binding;P:biological_process unknown;C:cell wall, plant-type cell wall;PBOO.I.C.G.H.G.
9.799.132.4At2g37400818316chloroplast lumen common family proteinF:binding;P:biological_process unknown;C:mitochondrion, chloroplast thylakoid lumen, plastid, chloroplast envelope;BOAMPFO.I.C.G.H.G.
9.799.127.0At1g16520838222unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PMOFAO.I.C.G.H.G.
9.799.118.1At3g57180824885GTP bindingF:GTP binding;P:biological_process unknown;C:chloroplast;MOBFPVAO.I.C.G.H.G.
9.699.160.0At3g46940823847deoxyuridine 5'-triphosphate nucleotidohydrolase familyF:hydrolase activity, dUTP diphosphatase activity;P:2'-deoxyribonucleotide metabolic process, dUTP metabolic process;C:cellular_component unknown;BOVMFPAO.I.C.G.H.G.
9.699.129.8At2g26180817158IQD6 (IQ-domain 6)F:calmodulin binding;P:unknown;C:cellular_component unknown;PMOFO.I.C.G.H.G.
9.699.128.4At1g65860842897FMO GS-OX1 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 1)belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolatesO.I.C.G.H.G.
9.699.121.3At2g37300818307unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OFPMBO.I.C.G.H.G.
9.699.117.1At1g80080844348TMM (TOO MANY MOUTHS)Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.O.I.C.G.H.G.
9.699.114.8At5g49500835010signal recognition particle 54 kDa protein 2 / SRP54 (SRP-54B)F:7S RNA binding, mRNA binding, GTP binding;P:SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;BOAMFPO.I.C.G.H.G.
9.699.112.5At3g23670821947KINESIN-12BMicrotubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast.O.I.C.G.H.G.
9.599.19.4At5g26790832737unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.499.187.5At2g43100818912aconitase C-terminal domain-containing proteinF:hydro-lyase activity, 3-isopropylmalate dehydratase activity;P:leucine biosynthetic process, metabolic process;C:3-isopropylmalate dehydratase complex, chloroplast;BOAFPMO.I.C.G.H.G.
9.499.116.0At5g43080834324CYCA3F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFVO.I.C.G.H.G.
9.499.115.6At1g10780837621F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
9.499.111.4At3g06840819868unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.399.1128.7At5g07030830594aspartic-type endopeptidaseF:aspartic-type endopeptidase activity;P:proteolysis;C:cell wall, plant-type cell wall;PMFOO.I.C.G.H.G.
9.399.143.1At5g66470836779GTP binding / RNA bindingF:RNA binding, GTP binding;P:unknown;C:chloroplast;BOMAPFO.I.C.G.H.G.
9.299.156.6At1g65370842848meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
9.299.129.2At3g25980822195mitotic spindle checkpoint protein, putative (MAD2)F:DNA binding;P:mitosis, mitotic cell cycle spindle assembly checkpoint;C:endomembrane system;MFOPO.I.C.G.H.G.
9.299.124.0At5g57410835847unknown proteinF:unknown;P:response to cadmium ion;C:unknown;MOFBPAVO.I.C.G.H.G.



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