CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-1797-raw-cel-1669768075

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
506.8 100.0 102.1 At4g02170 828119 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
224.5 100.0 240.4 At1g08650 837387 PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. O.I. C.G. H.G.
189.2 100.0 107.2 At1g52940 841727 PAP5 (PURPLE ACID PHOSPHATASE 5) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFA O.I. C.G. H.G.
188.1 100.0 243.7 At5g25190 832590 ethylene-responsive element-binding protein, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. O.I. C.G. H.G.
183.0 100.0 49.8 At1g07880 837303 ATMPK13 member of MAP Kinase O.I. C.G. H.G.
180.8 100.0 126.9 At5g25240 832595 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
176.0 100.0 141.1 At5g18690 831987 AGP25 (ARABINOGALACTAN PROTEINS 25) F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PMOVFB O.I. C.G. H.G.
165.8 100.0 156.4 At5g63130 836433 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
158.6 99.9 78.2 At1g45180 841086 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
152.5 99.9 43.2 At2g27120 817254 TIL2 (TILTED 2) Encodes a protein with similarity to DNA polymerase epsilon catalytic subunit. Based on yeast two hybrid analysis, not predicted to be a subunit of the DNA polymerase epsilon complex. No phenotype observed in homozygous mutant embryos or plants but in combination with TIL1-1/til1-1 heterozygotes arrest earlier than til1 homozygotes suggesting TIL2 functions redundantly with TIL1. O.I. C.G. H.G.
149.8 99.9 210.8 At5g20790 832202 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
147.1 99.9 44.6 At2g16450 816143 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
140.7 99.9 42.1 At1g52470 841678 hydrolase F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
139.5 99.9 27.8 At1g45100 841077 polyadenylate-binding protein, putative / PABP, putative F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MFPOB O.I. C.G. H.G.
136.6 99.9 201.3 At2g11810 815657 MGDC MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions. O.I. C.G. H.G.
125.9 99.9 332.1 At2g27970 817341 CKS2 (CDK-subunit 2) F:cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity;P:cell cycle;C:cellular_component unknown;MFOP O.I. C.G. H.G.
122.0 99.9 251.8 At2g28510 817399 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleolus;POMFB O.I. C.G. H.G.
118.2 99.9 58.2 At5g57130 835819 protein binding F:protein binding;P:protein metabolic process;C:cellular_component unknown;PBOAM O.I. C.G. H.G.
116.4 99.9 58.0 At5g47250 834772 disease resistance protein (CC-NBS-LRR class), putative F:protein binding, ATP binding;P:defense response, apoptosis;C:mitochondrion;PMBOFA O.I. C.G. H.G.
116.3 99.9 182.5 At4g12110 826819 SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1) Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase. O.I. C.G. H.G.
115.2 99.9 71.8 At3g52310 824396 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMFAPV O.I. C.G. H.G.
112.2 99.9 118.9 At2g44830 819092 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVA O.I. C.G. H.G.
106.8 99.9 121.9 At5g16000 831457 NIK1 (NSP-INTERACTING KINASE 1) F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
106.5 99.9 130.8 At3g53540 824522 unknown protein F:unknown;P:unknown;C:plasma membrane;OMBFPAV O.I. C.G. H.G.
106.1 99.9 63.1 At2g02680 814797 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOF O.I. C.G. H.G.
104.4 99.9 128.6 At2g46880 819301 PAP14 (PURPLE ACID PHOSPHATASE 14) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO O.I. C.G. H.G.
101.2 99.9 392.0 At5g20150 832137 SPX1 (SPX DOMAIN GENE 1) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBA O.I. C.G. H.G.
100.0 99.9 273.4 At2g04040 814938 TX1 AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+. O.I. C.G. H.G.
99.6 99.9 47.4 At1g44780 841042 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
96.6 99.9 40.6 At5g61620 836284 myb family transcription factor F:transcription factor activity;P:regulation of transcription;C:unknown;POM O.I. C.G. H.G.
96.1 99.9 113.2 At1g68360 843165 zinc finger protein-related F:transcription factor activity;P:regulation of transcription;C:intracellular;PMO O.I. C.G. H.G.
96.1 99.9 63.7 At2g44690 819077 ARAC9 A member of ROP GTPase gene family. O.I. C.G. H.G.
94.9 99.9 92.5 At5g16980 831561 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress, response to cyclopentenone;C:unknown;BOFMPA O.I. C.G. H.G.
94.8 99.9 78.3 At1g08310 837351 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA O.I. C.G. H.G.
92.8 99.9 53.3 At1g33460 3766895 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
92.0 99.9 242.7 At3g53620 824530 AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4) Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate. O.I. C.G. H.G.
90.8 99.9 277.9 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF O.I. C.G. H.G.
90.2 99.9 145.0 At1g44110 841014 CYCA1 F:cyclin-dependent protein kinase regulator activity;P:response to cyclopentenone, regulation of cell cycle;C:nucleus;MPOFVB O.I. C.G. H.G.
90.0 99.9 340.5 At2g44450 819052 BGLU15 (BETA GLUCOSIDASE 15) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFA O.I. C.G. H.G.
87.8 99.9 107.3 At1g44900 841056 ATP binding / DNA binding / DNA-dependent ATPase F:DNA-dependent ATPase activity, DNA binding, ATP binding;P:DNA replication, DNA replication initiation;C:nucleus, chloroplast;MOBFPAV O.I. C.G. H.G.
87.3 99.9 179.1 At2g19990 816518 PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE) Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive. O.I. C.G. H.G.
87.0 99.9 273.5 At2g27190 817261 PAP12 (PURPLE ACID PHOSPHATASE 12) secreted purple acid phosphatase precursor O.I. C.G. H.G.
84.9 99.9 180.5 At5g17340 831600 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
83.5 99.9 151.5 At4g36350 829787 PAP25 (PURPLE ACID PHOSPHATASE 25) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFA O.I. C.G. H.G.
83.1 99.9 37.3 At3g42725 823305 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
82.3 99.9 40.2 At2g43140 818916 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBF O.I. C.G. H.G.
81.9 99.9 70.8 At1g15170 838083 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:chloroplast, membrane;BOPFMA O.I. C.G. H.G.
79.6 99.9 258.6 At2g27080 817250 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
78.8 99.9 108.9 At2g45130 819120 SPX3 (SPX DOMAIN GENE 3) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO O.I. C.G. H.G.
78.2 99.9 64.6 At3g04530 819609 PPCK2 Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light. O.I. C.G. H.G.
77.0 99.9 60.6 At5g53830 835464 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFBM O.I. C.G. H.G.
76.5 99.9 62.5 At5g17100 831573 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
76.2 99.9 24.7 At2g01660 814695 PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. O.I. C.G. H.G.
75.2 99.9 325.9 At5g24660 832538 LSU2 (RESPONSE TO LOW SULFUR 2) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
74.9 99.9 119.5 At1g08430 837363 ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1) Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited). O.I. C.G. H.G.
74.2 99.9 56.4 At2g19850 816504 - F:molecular_function unknown;P:biological_process unknown;C:unknown;PMVO O.I. C.G. H.G.
73.5 99.9 25.1 At1g73700 843705 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
71.9 99.9 29.5 At3g44520 - - O.I. C.G. H.G.
71.8 99.9 99.2 At2g03800 814906 GEK1 (GEKO1) encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype. O.I. C.G. H.G.
71.5 99.9 119.6 At2g47260 819339 WRKY23 member of WRKY Transcription Factor; Group I O.I. C.G. H.G.
71.2 99.9 98.7 At4g33560 829495 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
71.0 99.9 35.8 At3g54630 824628 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
69.9 99.9 402.7 At4g33070 829444 pyruvate decarboxylase, putative F:in 6 functions;P:unknown;C:membrane;BOFPAMV O.I. C.G. H.G.
67.7 99.9 54.2 At1g63650 842669 EGL3 (ENHANCER OF GLABRA 3) Mutant has reduced trichomes, anthocyanin, and seed coat mucilage and abnormally patterned stomates. Encodes a bHLH Transcription Factor 1. The protein is functionally redundant with GL3 and TT8 and interacts with TTG1, the myb proteins GL1, PAP1 and 2, CPC and TRY, and it will form heterodimers with GL3. Expression in N (non-hair cell forming) cell layers is negatively regulated by WER. Expression in H cells (hair cell forming) is promoted by CPC/TRY. O.I. C.G. H.G.
66.5 99.8 72.8 At5g24655 832537 LSU4 (RESPONSE TO LOW SULFUR 4) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
66.2 99.8 39.2 At5g24600 832531 unknown protein F:unknown;P:biological_process unknown;C:plasma membrane;PBO O.I. C.G. H.G.
65.4 99.8 106.4 At1g33940 840291 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
64.6 99.8 65.8 At1g66040 842917 VIM4 (VARIANT IN METHYLATION 4) predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH4/VIM4 cDNA through RT-PCR were unsuccessful and analysis of the expression of this gene is difficult since it shares 99% nucleotide identity with ORTH5/VIM2. O.I. C.G. H.G.
64.5 99.8 91.8 At2g39705 818554 RTFL8 (ROTUNDIFOLIA LIKE 8) F:molecular_function unknown;P:shoot development;C:chloroplast;P O.I. C.G. H.G.
64.5 99.8 48.2 At3g05630 819730 PLDP2 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. O.I. C.G. H.G.
64.5 99.8 19.5 At2g32470 817808 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
63.4 99.8 259.3 At1g73010 843632 phosphatase F:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBF O.I. C.G. H.G.
63.1 99.8 196.5 At1g69880 843324 ATH8 (thioredoxin H-type 8) F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV O.I. C.G. H.G.
63.0 99.8 151.6 At2g04000 814926 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
63.0 99.8 39.9 At1g22090 838814 emb2204 (embryo defective 2204) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;P O.I. C.G. H.G.
62.9 99.8 129.7 At2g17280 816234 phosphoglycerate/bisphosphoglycerate mutase family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;FOPB O.I. C.G. H.G.
61.6 99.8 70.7 At5g57100 835814 transporter-related F:unknown;P:unknown;C:membrane;PMFOB O.I. C.G. H.G.
60.3 99.8 84.9 At2g03780 814905 translin family protein F:sequence-specific DNA binding, DNA binding;P:biological_process unknown;C:unknown;MFAOP O.I. C.G. H.G.
59.7 99.8 82.0 At2g44240 819032 unknown protein F:unknown;P:response to oxidative stress;C:endomembrane system;PFB O.I. C.G. H.G.
58.9 99.8 37.8 At5g20540 832176 ATBRXL4 (BREVIS RADIX-LIKE 4) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. O.I. C.G. H.G.
58.6 99.8 137.8 At3g07350 819923 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
57.2 99.8 122.5 At2g02570 814787 nucleic acid binding F:nucleic acid binding;P:unknown;C:unknown;MFOPB O.I. C.G. H.G.
57.1 99.8 234.2 At3g02040 821175 SRG3 (senescence-related gene 3) F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAV O.I. C.G. H.G.
55.6 99.8 191.3 At1g22190 838824 AP2 domain-containing transcription factor, putative F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POVB O.I. C.G. H.G.
55.4 99.8 25.7 At1g36920 840600 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
54.9 99.8 125.2 At2g44360 819043 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
53.4 99.8 61.4 At5g60200 836142 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PO O.I. C.G. H.G.
52.0 99.8 476.6 At2g16060 816103 AHB1 (ARABIDOPSIS HEMOGLOBIN 1) Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen. O.I. C.G. H.G.
51.6 99.8 120.9 At2g14130 815899 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
50.6 99.8 25.2 At1g63540 842659 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOBPVA O.I. C.G. H.G.
50.0 99.8 46.6 At5g25070 832578 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
50.0 99.8 18.8 At2g19610 816480 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MFOP O.I. C.G. H.G.
49.6 99.8 97.8 At2g41480 818746 electron carrier/ heme binding / peroxidase F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBM O.I. C.G. H.G.
49.4 99.8 187.1 At1g43800 840977 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOM O.I. C.G. H.G.
49.2 99.8 50.3 At1g19260 838509 hAT dimerisation domain-containing protein F:protein dimerization activity;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
48.3 99.8 146.7 At1g45976 841106 SBP1 (s-ribonuclease binding protein 1) F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFB O.I. C.G. H.G.
48.2 99.8 86.7 At2g15760 816070 calmodulin-binding protein F:calmodulin binding;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
47.3 99.8 40.7 At1g31320 840020 LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
47.2 99.8 144.7 At5g47370 834784 HAT2 homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis. O.I. C.G. H.G.
47.2 99.8 18.0 At2g02700 814799 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:cellular_component unknown;PM O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
506.8	100.0	102.1	At4g02170	828119	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
224.5	100.0	240.4	At1g08650	837387	PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)	Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.	O.I.	C.G.	H.G.
189.2	100.0	107.2	At1g52940	841727	PAP5 (PURPLE ACID PHOSPHATASE 5)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFA	O.I.	C.G.	H.G.
188.1	100.0	243.7	At5g25190	832590	ethylene-responsive element-binding protein, putative	encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.	O.I.	C.G.	H.G.
183.0	100.0	49.8	At1g07880	837303	ATMPK13	member of MAP Kinase	O.I.	C.G.	H.G.
180.8	100.0	126.9	At5g25240	832595	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
176.0	100.0	141.1	At5g18690	831987	AGP25 (ARABINOGALACTAN PROTEINS 25)	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PMOVFB	O.I.	C.G.	H.G.
165.8	100.0	156.4	At5g63130	836433	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
158.6	99.9	78.2	At1g45180	841086	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
152.5	99.9	43.2	At2g27120	817254	TIL2 (TILTED 2)	Encodes a protein with similarity to DNA polymerase epsilon catalytic subunit. Based on yeast two hybrid analysis, not predicted to be a subunit of the DNA polymerase epsilon complex. No phenotype observed in homozygous mutant embryos or plants but in combination with TIL1-1/til1-1 heterozygotes arrest earlier than til1 homozygotes suggesting TIL2 functions redundantly with TIL1.	O.I.	C.G.	H.G.
149.8	99.9	210.8	At5g20790	832202	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
147.1	99.9	44.6	At2g16450	816143	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
140.7	99.9	42.1	At1g52470	841678	hydrolase	F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
139.5	99.9	27.8	At1g45100	841077	polyadenylate-binding protein, putative / PABP, putative	F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MFPOB	O.I.	C.G.	H.G.
136.6	99.9	201.3	At2g11810	815657	MGDC	MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.	O.I.	C.G.	H.G.
125.9	99.9	332.1	At2g27970	817341	CKS2 (CDK-subunit 2)	F:cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity;P:cell cycle;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
122.0	99.9	251.8	At2g28510	817399	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleolus;POMFB	O.I.	C.G.	H.G.
118.2	99.9	58.2	At5g57130	835819	protein binding	F:protein binding;P:protein metabolic process;C:cellular_component unknown;PBOAM	O.I.	C.G.	H.G.
116.4	99.9	58.0	At5g47250	834772	disease resistance protein (CC-NBS-LRR class), putative	F:protein binding, ATP binding;P:defense response, apoptosis;C:mitochondrion;PMBOFA	O.I.	C.G.	H.G.
116.3	99.9	182.5	At4g12110	826819	SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1)	Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.	O.I.	C.G.	H.G.
115.2	99.9	71.8	At3g52310	824396	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMFAPV	O.I.	C.G.	H.G.
112.2	99.9	118.9	At2g44830	819092	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVA	O.I.	C.G.	H.G.
106.8	99.9	121.9	At5g16000	831457	NIK1 (NSP-INTERACTING KINASE 1)	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
106.5	99.9	130.8	At3g53540	824522	unknown protein	F:unknown;P:unknown;C:plasma membrane;OMBFPAV	O.I.	C.G.	H.G.
106.1	99.9	63.1	At2g02680	814797	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOF	O.I.	C.G.	H.G.
104.4	99.9	128.6	At2g46880	819301	PAP14 (PURPLE ACID PHOSPHATASE 14)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO	O.I.	C.G.	H.G.
101.2	99.9	392.0	At5g20150	832137	SPX1 (SPX DOMAIN GENE 1)	F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBA	O.I.	C.G.	H.G.
100.0	99.9	273.4	At2g04040	814938	TX1	AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+.	O.I.	C.G.	H.G.
99.6	99.9	47.4	At1g44780	841042	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
96.6	99.9	40.6	At5g61620	836284	myb family transcription factor	F:transcription factor activity;P:regulation of transcription;C:unknown;POM	O.I.	C.G.	H.G.
96.1	99.9	113.2	At1g68360	843165	zinc finger protein-related	F:transcription factor activity;P:regulation of transcription;C:intracellular;PMO	O.I.	C.G.	H.G.
96.1	99.9	63.7	At2g44690	819077	ARAC9	A member of ROP GTPase gene family.	O.I.	C.G.	H.G.
94.9	99.9	92.5	At5g16980	831561	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress, response to cyclopentenone;C:unknown;BOFMPA	O.I.	C.G.	H.G.
94.8	99.9	78.3	At1g08310	837351	esterase/lipase/thioesterase family protein	F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA	O.I.	C.G.	H.G.
92.8	99.9	53.3	At1g33460	3766895	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
92.0	99.9	242.7	At3g53620	824530	AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)	Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.	O.I.	C.G.	H.G.
90.8	99.9	277.9	At1g17710	838347	phosphatase	F:phosphatase activity;P:metabolic process;C:unknown;MPOBF	O.I.	C.G.	H.G.
90.2	99.9	145.0	At1g44110	841014	CYCA1	F:cyclin-dependent protein kinase regulator activity;P:response to cyclopentenone, regulation of cell cycle;C:nucleus;MPOFVB	O.I.	C.G.	H.G.
90.0	99.9	340.5	At2g44450	819052	BGLU15 (BETA GLUCOSIDASE 15)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFA	O.I.	C.G.	H.G.
87.8	99.9	107.3	At1g44900	841056	ATP binding / DNA binding / DNA-dependent ATPase	F:DNA-dependent ATPase activity, DNA binding, ATP binding;P:DNA replication, DNA replication initiation;C:nucleus, chloroplast;MOBFPAV	O.I.	C.G.	H.G.
87.3	99.9	179.1	At2g19990	816518	PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)	Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.	O.I.	C.G.	H.G.
87.0	99.9	273.5	At2g27190	817261	PAP12 (PURPLE ACID PHOSPHATASE 12)	secreted purple acid phosphatase precursor	O.I.	C.G.	H.G.
84.9	99.9	180.5	At5g17340	831600	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
83.5	99.9	151.5	At4g36350	829787	PAP25 (PURPLE ACID PHOSPHATASE 25)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFA	O.I.	C.G.	H.G.
83.1	99.9	37.3	At3g42725	823305	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
82.3	99.9	40.2	At2g43140	818916	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBF	O.I.	C.G.	H.G.
81.9	99.9	70.8	At1g15170	838083	MATE efflux family protein	F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:chloroplast, membrane;BOPFMA	O.I.	C.G.	H.G.
79.6	99.9	258.6	At2g27080	817250	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
78.8	99.9	108.9	At2g45130	819120	SPX3 (SPX DOMAIN GENE 3)	F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO	O.I.	C.G.	H.G.
78.2	99.9	64.6	At3g04530	819609	PPCK2	Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.	O.I.	C.G.	H.G.
77.0	99.9	60.6	At5g53830	835464	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFBM	O.I.	C.G.	H.G.
76.5	99.9	62.5	At5g17100	831573	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
76.2	99.9	24.7	At2g01660	814695	PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6)	Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.	O.I.	C.G.	H.G.
75.2	99.9	325.9	At5g24660	832538	LSU2 (RESPONSE TO LOW SULFUR 2)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
74.9	99.9	119.5	At1g08430	837363	ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)	Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited).	O.I.	C.G.	H.G.
74.2	99.9	56.4	At2g19850	816504	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;PMVO	O.I.	C.G.	H.G.
73.5	99.9	25.1	At1g73700	843705	MATE efflux family protein	F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
71.9	99.9	29.5	At3g44520		-	-	O.I.	C.G.	H.G.
71.8	99.9	99.2	At2g03800	814906	GEK1 (GEKO1)	encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.	O.I.	C.G.	H.G.
71.5	99.9	119.6	At2g47260	819339	WRKY23	member of WRKY Transcription Factor; Group I	O.I.	C.G.	H.G.
71.2	99.9	98.7	At4g33560	829495	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
71.0	99.9	35.8	At3g54630	824628	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
69.9	99.9	402.7	At4g33070	829444	pyruvate decarboxylase, putative	F:in 6 functions;P:unknown;C:membrane;BOFPAMV	O.I.	C.G.	H.G.
67.7	99.9	54.2	At1g63650	842669	EGL3 (ENHANCER OF GLABRA 3)	Mutant has reduced trichomes, anthocyanin, and seed coat mucilage and abnormally patterned stomates. Encodes a bHLH Transcription Factor 1. The protein is functionally redundant with GL3 and TT8 and interacts with TTG1, the myb proteins GL1, PAP1 and 2, CPC and TRY, and it will form heterodimers with GL3. Expression in N (non-hair cell forming) cell layers is negatively regulated by WER. Expression in H cells (hair cell forming) is promoted by CPC/TRY.	O.I.	C.G.	H.G.
66.5	99.8	72.8	At5g24655	832537	LSU4 (RESPONSE TO LOW SULFUR 4)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
66.2	99.8	39.2	At5g24600	832531	unknown protein	F:unknown;P:biological_process unknown;C:plasma membrane;PBO	O.I.	C.G.	H.G.
65.4	99.8	106.4	At1g33940	840291	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
64.6	99.8	65.8	At1g66040	842917	VIM4 (VARIANT IN METHYLATION 4)	predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH4/VIM4 cDNA through RT-PCR were unsuccessful and analysis of the expression of this gene is difficult since it shares 99% nucleotide identity with ORTH5/VIM2.	O.I.	C.G.	H.G.
64.5	99.8	91.8	At2g39705	818554	RTFL8 (ROTUNDIFOLIA LIKE 8)	F:molecular_function unknown;P:shoot development;C:chloroplast;P	O.I.	C.G.	H.G.
64.5	99.8	48.2	At3g05630	819730	PLDP2	Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.	O.I.	C.G.	H.G.
64.5	99.8	19.5	At2g32470	817808	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
63.4	99.8	259.3	At1g73010	843632	phosphatase	F:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBF	O.I.	C.G.	H.G.
63.1	99.8	196.5	At1g69880	843324	ATH8 (thioredoxin H-type 8)	F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV	O.I.	C.G.	H.G.
63.0	99.8	151.6	At2g04000	814926	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
63.0	99.8	39.9	At1g22090	838814	emb2204 (embryo defective 2204)	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;P	O.I.	C.G.	H.G.
62.9	99.8	129.7	At2g17280	816234	phosphoglycerate/bisphosphoglycerate mutase family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;FOPB	O.I.	C.G.	H.G.
61.6	99.8	70.7	At5g57100	835814	transporter-related	F:unknown;P:unknown;C:membrane;PMFOB	O.I.	C.G.	H.G.
60.3	99.8	84.9	At2g03780	814905	translin family protein	F:sequence-specific DNA binding, DNA binding;P:biological_process unknown;C:unknown;MFAOP	O.I.	C.G.	H.G.
59.7	99.8	82.0	At2g44240	819032	unknown protein	F:unknown;P:response to oxidative stress;C:endomembrane system;PFB	O.I.	C.G.	H.G.
58.9	99.8	37.8	At5g20540	832176	ATBRXL4 (BREVIS RADIX-LIKE 4)	Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.	O.I.	C.G.	H.G.
58.6	99.8	137.8	At3g07350	819923	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
57.2	99.8	122.5	At2g02570	814787	nucleic acid binding	F:nucleic acid binding;P:unknown;C:unknown;MFOPB	O.I.	C.G.	H.G.
57.1	99.8	234.2	At3g02040	821175	SRG3 (senescence-related gene 3)	F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAV	O.I.	C.G.	H.G.
55.6	99.8	191.3	At1g22190	838824	AP2 domain-containing transcription factor, putative	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POVB	O.I.	C.G.	H.G.
55.4	99.8	25.7	At1g36920	840600	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
54.9	99.8	125.2	At2g44360	819043	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
53.4	99.8	61.4	At5g60200	836142	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PO	O.I.	C.G.	H.G.
52.0	99.8	476.6	At2g16060	816103	AHB1 (ARABIDOPSIS HEMOGLOBIN 1)	Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen.	O.I.	C.G.	H.G.
51.6	99.8	120.9	At2g14130	815899	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
50.6	99.8	25.2	At1g63540	842659	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOBPVA	O.I.	C.G.	H.G.
50.0	99.8	46.6	At5g25070	832578	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
50.0	99.8	18.8	At2g19610	816480	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MFOP	O.I.	C.G.	H.G.
49.6	99.8	97.8	At2g41480	818746	electron carrier/ heme binding / peroxidase	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBM	O.I.	C.G.	H.G.
49.4	99.8	187.1	At1g43800	840977	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOM	O.I.	C.G.	H.G.
49.2	99.8	50.3	At1g19260	838509	hAT dimerisation domain-containing protein	F:protein dimerization activity;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
48.3	99.8	146.7	At1g45976	841106	SBP1 (s-ribonuclease binding protein 1)	F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFB	O.I.	C.G.	H.G.
48.2	99.8	86.7	At2g15760	816070	calmodulin-binding protein	F:calmodulin binding;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
47.3	99.8	40.7	At1g31320	840020	LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4)	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
47.2	99.8	144.7	At5g47370	834784	HAT2	homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis.	O.I.	C.G.	H.G.
47.2	99.8	18.0	At2g02700	814799	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-1797-raw-cel-1669768075
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-1797-raw-cel-1669768075 GSE experiment -

GSM ID -

Assay name E-MEXP-1797-raw-cel-1669768075

GSE experiment -