Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1797-raw-cel-1669768048
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
295.2100.0329.2At2g19990816518PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.O.I.C.G.H.G.
255.4100.0289.6At5g22460832307esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:cell wall, vacuole, plant-type cell wall;BPOFO.I.C.G.H.G.
248.0100.071.4At4g02170828119unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
234.2100.095.1At1g45180841086zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBO.I.C.G.H.G.
226.4100.0263.1At1g71380843479ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOFO.I.C.G.H.G.
202.1100.074.2At2g16580816158auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
199.8100.0357.7At3g53620824530AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.O.I.C.G.H.G.
175.8100.0161.0At5g63130836433octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
170.6100.048.0At2g16450816143F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
170.1100.098.5At3g45960823739ATEXLA3 (arabidopsis thaliana expansin-like a3)member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)O.I.C.G.H.G.
166.4100.0161.1At2g15760816070calmodulin-binding proteinF:calmodulin binding;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
163.399.9345.5At2g01610814690invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
158.599.946.4At1g07880837303ATMPK13member of MAP KinaseO.I.C.G.H.G.
155.299.9190.3At1g44110841014CYCA1F:cyclin-dependent protein kinase regulator activity;P:response to cyclopentenone, regulation of cell cycle;C:nucleus;MPOFVBO.I.C.G.H.G.
150.399.950.1At3g42725823305unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
149.499.9217.1At5g25190832590ethylene-responsive element-binding protein, putativeencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.O.I.C.G.H.G.
147.499.9167.7At1g08430837363ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited).O.I.C.G.H.G.
146.399.9194.0At1g08650837387PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.O.I.C.G.H.G.
132.699.9262.6At2g28510817399Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleolus;POMFBO.I.C.G.H.G.
129.599.9336.8At2g27970817341CKS2 (CDK-subunit 2)F:cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity;P:cell cycle;C:cellular_component unknown;MFOPO.I.C.G.H.G.
128.199.963.6At4g30430829166TET9 (TETRASPANIN9)Member of TETRASPANIN familyO.I.C.G.H.G.
127.499.939.5At2g27120817254TIL2 (TILTED 2)Encodes a protein with similarity to DNA polymerase epsilon catalytic subunit. Based on yeast two hybrid analysis, not predicted to be a subunit of the DNA polymerase epsilon complex. No phenotype observed in homozygous mutant embryos or plants but in combination with TIL1-1/til1-1 heterozygotes arrest earlier than til1 homozygotes suggesting TIL2 functions redundantly with TIL1.O.I.C.G.H.G.
126.299.973.0At2g44690819077ARAC9A member of ROP GTPase gene family.O.I.C.G.H.G.
123.999.9310.6At3g54260824593unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PMO.I.C.G.H.G.
117.099.984.3At1g52940841727PAP5 (PURPLE ACID PHOSPHATASE 5)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFAO.I.C.G.H.G.
114.299.9135.5At3g53540824522unknown proteinF:unknown;P:unknown;C:plasma membrane;OMBFPAVO.I.C.G.H.G.
106.399.9298.8At2g27080817250harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
106.199.950.7At5g20540832176ATBRXL4 (BREVIS RADIX-LIKE 4)Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.O.I.C.G.H.G.
106.099.9347.2At2g42570818857unknown proteinF:unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
105.299.9446.0At2g39700818553ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.O.I.C.G.H.G.
104.399.928.9At2g01660814695PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6)Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.O.I.C.G.H.G.
101.699.9113.2At2g44830819092protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVAO.I.C.G.H.G.
99.099.923.4At1g45100841077polyadenylate-binding protein, putative / PABP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.
98.599.9113.6At1g44900841056ATP binding / DNA binding / DNA-dependent ATPaseF:DNA-dependent ATPase activity, DNA binding, ATP binding;P:DNA replication, DNA replication initiation;C:nucleus, chloroplast;MOBFPAVO.I.C.G.H.G.
98.499.9179.8At3g27400822361pectate lyase family proteinF:pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
97.899.965.1At1g63650842669EGL3 (ENHANCER OF GLABRA 3)Mutant has reduced trichomes, anthocyanin, and seed coat mucilage and abnormally patterned stomates. Encodes a bHLH Transcription Factor 1. The protein is functionally redundant with GL3 and TT8 and interacts with TTG1, the myb proteins GL1, PAP1 and 2, CPC and TRY, and it will form heterodimers with GL3. Expression in N (non-hair cell forming) cell layers is negatively regulated by WER. Expression in H cells (hair cell forming) is promoted by CPC/TRY.O.I.C.G.H.G.
96.999.9115.3At2g03800814906GEK1 (GEKO1)encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.O.I.C.G.H.G.
96.199.9267.9At2g04040814938TX1AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+.O.I.C.G.H.G.
95.299.9168.1At2g11810815657MGDCMGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.O.I.C.G.H.G.
94.899.967.3At5g53830835464VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFBMO.I.C.G.H.G.
92.199.9373.9At5g20150832137SPX1 (SPX DOMAIN GENE 1)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBAO.I.C.G.H.G.
89.699.945.6At5g24600832531unknown proteinF:unknown;P:biological_process unknown;C:plasma membrane;PBOO.I.C.G.H.G.
85.699.9332.1At2g44450819052BGLU15 (BETA GLUCOSIDASE 15)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFAO.I.C.G.H.G.
85.599.9113.4At2g45130819120SPX3 (SPX DOMAIN GENE 3)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPOO.I.C.G.H.G.
85.599.967.6At3g04530819609PPCK2Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.O.I.C.G.H.G.
85.299.970.3At5g25150832586TAF5 (TBP-ASSOCIATED FACTOR 5)Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).O.I.C.G.H.G.
84.499.9345.2At5g24660832538LSU2 (RESPONSE TO LOW SULFUR 2)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
84.499.950.9At1g334603766895transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
84.199.9184.2At2g29440817493ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
83.299.9126.7At2g41480818746electron carrier/ heme binding / peroxidaseF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBMO.I.C.G.H.G.
82.399.938.6At3g54630824628-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
81.099.984.9At5g25240832595-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
80.399.972.1At1g08310837351esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:unknown;BPOMFAO.I.C.G.H.G.
80.099.9126.5At2g47260819339WRKY23member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
79.699.969.8At1g15170838083MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:chloroplast, membrane;BOPFMAO.I.C.G.H.G.
78.599.9150.4At1g03820839400unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OPFMBO.I.C.G.H.G.
78.199.953.0At3g05630819730PLDP2Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.O.I.C.G.H.G.
77.999.9152.0At5g20790832202unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
77.599.931.1At5g10850830952transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
77.099.9101.4At1g68360843165zinc finger protein-relatedF:transcription factor activity;P:regulation of transcription;C:intracellular;PMOO.I.C.G.H.G.
75.999.976.0At5g24310832498ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVO.I.C.G.H.G.
74.799.9252.2At1g17710838347phosphataseF:phosphatase activity;P:metabolic process;C:unknown;MPOBFO.I.C.G.H.G.
74.299.9264.6At2g01820814713leucine-rich repeat protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:pollen development;C:plasma membrane, plant-type cell wall;MPOBFVAO.I.C.G.H.G.
73.999.941.0At4g19730827717glycosyl hydrolase family 18 proteinF:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPAO.I.C.G.H.G.
73.899.999.6At5g25170832588unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPOFO.I.C.G.H.G.
73.699.952.6At2g02680814797DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOFO.I.C.G.H.G.
73.299.990.9At5g18690831987AGP25 (ARABINOGALACTAN PROTEINS 25)F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PMOVFBO.I.C.G.H.G.
70.499.935.5At4g23720828472unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
70.399.9260.0At3g02040821175SRG3 (senescence-related gene 3)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAVO.I.C.G.H.G.
69.899.939.7At1g44780841042unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
69.199.974.9At5g57100835814transporter-relatedF:unknown;P:unknown;C:membrane;PMFOBO.I.C.G.H.G.
67.299.824.0At1g73700843705MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
67.199.8240.3At2g27190817261PAP12 (PURPLE ACID PHOSPHATASE 12)secreted purple acid phosphatase precursorO.I.C.G.H.G.
67.099.847.1At1g18670838448IBS1 (IMPAIRED IN BABA-INDUCED STERILITY 1)Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.O.I.C.G.H.G.
65.699.865.1At4g38400829997ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2)member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)O.I.C.G.H.G.
65.099.840.5At1g22090838814emb2204 (embryo defective 2204)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PO.I.C.G.H.G.
63.699.849.8At1g19200838503senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
63.299.875.4At3g54030824570protein kinase family proteinF:protein tyrosine kinase activity, binding, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;PMBOFVAO.I.C.G.H.G.
62.599.857.4At1g61810842478BGLU45 (BETA-GLUCOSIDASE 45)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAO.I.C.G.H.G.
57.499.859.7At5g51480835222SKS2 (SKU5 SIMILAR 2)F:oxidoreductase activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;FBPMOAO.I.C.G.H.G.
56.699.899.0At1g33940840291-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
55.799.814.5At4g17980827523anac071 (Arabidopsis NAC domain containing protein 71)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
55.599.885.0At2g27130817255protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to plasma membrane, anchored to membrane;PO.I.C.G.H.G.
55.199.859.2At4g33985829545unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
55.199.853.1At5g17100831573-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
54.899.8141.3At2g04000814926transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
53.799.839.8At1g60570842352kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMVBOAFO.I.C.G.H.G.
52.399.847.3At2g19850816504-F:molecular_function unknown;P:biological_process unknown;C:unknown;PMVOO.I.C.G.H.G.
51.799.8209.2At3g02870821206VTC4Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.O.I.C.G.H.G.
51.799.898.6At2g20800816609NDB4 (NAD(P)H dehydrogenase B4)F:NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion, plastid;BOFPAMO.I.C.G.H.G.
50.299.818.8At2g19610816480zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MFOPO.I.C.G.H.G.
50.199.838.1At3g54000824567-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
49.699.8229.3At1g73010843632phosphataseF:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBFO.I.C.G.H.G.
49.399.850.9At2g34140817975Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;POO.I.C.G.H.G.
48.699.8170.0At5g51190835193AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.O.I.C.G.H.G.
48.499.863.8At5g25080832579-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
47.099.8113.5At4g36350829787PAP25 (PURPLE ACID PHOSPHATASE 25)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFAO.I.C.G.H.G.
46.999.8128.8At1g50490841471UBC20 (ubiquitin-conjugating enzyme 20)Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.O.I.C.G.H.G.
46.799.886.1At2g46880819301PAP14 (PURPLE ACID PHOSPHATASE 14)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOO.I.C.G.H.G.
46.399.845.5At1g48260841246CIPK17 (CBL-INTERACTING PROTEIN KINASE 17)Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.21), which has also been reported as a member of the CBL-interacting protein kinases (CIPK17).O.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage