Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1797-raw-cel-1669767994
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
209.9100.065.7At4g02170828119unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
185.6100.0188.1At1g08430837363ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited).O.I.C.G.H.G.
181.6100.0170.8At3g53540824522unknown proteinF:unknown;P:unknown;C:plasma membrane;OMBFPAVO.I.C.G.H.G.
167.3100.0145.2At2g44830819092protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVAO.I.C.G.H.G.
157.899.9201.5At1g08650837387PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.O.I.C.G.H.G.
156.899.977.8At1g45180841086zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBO.I.C.G.H.G.
156.799.943.8At2g27120817254TIL2 (TILTED 2)Encodes a protein with similarity to DNA polymerase epsilon catalytic subunit. Based on yeast two hybrid analysis, not predicted to be a subunit of the DNA polymerase epsilon complex. No phenotype observed in homozygous mutant embryos or plants but in combination with TIL1-1/til1-1 heterozygotes arrest earlier than til1 homozygotes suggesting TIL2 functions redundantly with TIL1.O.I.C.G.H.G.
153.699.944.0At1g52470841678hydrolaseF:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
152.799.929.1At1g45100841077polyadenylate-binding protein, putative / PABP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.
147.899.9216.0At5g25190832590ethylene-responsive element-binding protein, putativeencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.O.I.C.G.H.G.
146.999.9128.9At5g18690831987AGP25 (ARABINOGALACTAN PROTEINS 25)F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PMOVFBO.I.C.G.H.G.
143.399.9206.2At2g11810815657MGDCMGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.O.I.C.G.H.G.
141.599.9181.7At1g44110841014CYCA1F:cyclin-dependent protein kinase regulator activity;P:response to cyclopentenone, regulation of cell cycle;C:nucleus;MPOFVBO.I.C.G.H.G.
140.999.9227.5At2g19990816518PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.O.I.C.G.H.G.
137.299.9111.2At5g16980831561NADP-dependent oxidoreductase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress, response to cyclopentenone;C:unknown;BOFMPAO.I.C.G.H.G.
137.199.991.2At1g52940841727PAP5 (PURPLE ACID PHOSPHATASE 5)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFAO.I.C.G.H.G.
134.799.9416.6At2g44450819052BGLU15 (BETA GLUCOSIDASE 15)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFAO.I.C.G.H.G.
132.399.9262.2At2g28510817399Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleolus;POMFBO.I.C.G.H.G.
130.099.9138.5At5g63130836433octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
128.899.992.9At1g66040842917VIM4 (VARIANT IN METHYLATION 4)predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH4/VIM4 cDNA through RT-PCR were unsuccessful and analysis of the expression of this gene is difficult since it shares 99% nucleotide identity with ORTH5/VIM2.O.I.C.G.H.G.
128.399.9330.4At1g17710838347phosphataseF:phosphatase activity;P:metabolic process;C:unknown;MPOBFO.I.C.G.H.G.
128.099.9141.3At2g15760816070calmodulin-binding proteinF:calmodulin binding;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
127.799.9334.5At2g27970817341CKS2 (CDK-subunit 2)F:cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity;P:cell cycle;C:cellular_component unknown;MFOPO.I.C.G.H.G.
127.199.9308.1At2g04040814938TX1AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+.O.I.C.G.H.G.
126.099.941.2At2g16450816143F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
125.799.9128.3At1g44900841056ATP binding / DNA binding / DNA-dependent ATPaseF:DNA-dependent ATPase activity, DNA binding, ATP binding;P:DNA replication, DNA replication initiation;C:nucleus, chloroplast;MOBFPAVO.I.C.G.H.G.
125.699.9277.3At1g69880843324ATH8 (thioredoxin H-type 8)F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAVO.I.C.G.H.G.
125.299.947.6At3g54630824628-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
125.199.9420.1At5g24660832538LSU2 (RESPONSE TO LOW SULFUR 2)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
120.999.940.5At1g07880837303ATMPK13member of MAP KinaseO.I.C.G.H.G.
119.599.967.0At2g02680814797DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOFO.I.C.G.H.G.
117.299.9186.4At5g20790832202unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
110.999.958.3At1g334603766895transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
107.999.950.1At5g24600832531unknown proteinF:unknown;P:biological_process unknown;C:plasma membrane;PBOO.I.C.G.H.G.
100.599.947.6At1g44780841042unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
99.699.965.7At1g63650842669EGL3 (ENHANCER OF GLABRA 3)Mutant has reduced trichomes, anthocyanin, and seed coat mucilage and abnormally patterned stomates. Encodes a bHLH Transcription Factor 1. The protein is functionally redundant with GL3 and TT8 and interacts with TTG1, the myb proteins GL1, PAP1 and 2, CPC and TRY, and it will form heterodimers with GL3. Expression in N (non-hair cell forming) cell layers is negatively regulated by WER. Expression in H cells (hair cell forming) is promoted by CPC/TRY.O.I.C.G.H.G.
97.499.9124.3At2g46880819301PAP14 (PURPLE ACID PHOSPHATASE 14)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOO.I.C.G.H.G.
91.999.973.0At5g25150832586TAF5 (TBP-ASSOCIATED FACTOR 5)Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).O.I.C.G.H.G.
90.799.9161.2At4g12110826819SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1)Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.O.I.C.G.H.G.
90.199.947.7At1g22090838814emb2204 (embryo defective 2204)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PO.I.C.G.H.G.
89.699.9239.5At3g53620824530AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.O.I.C.G.H.G.
89.699.9110.8At2g03800814906GEK1 (GEKO1)encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.O.I.C.G.H.G.
86.299.949.9At5g47250834772disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:mitochondrion;PMBOFAO.I.C.G.H.G.
84.299.926.9At1g73700843705MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
82.699.9354.1At5g20150832137SPX1 (SPX DOMAIN GENE 1)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBAO.I.C.G.H.G.
81.499.940.0At2g43140818916DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBFO.I.C.G.H.G.
78.699.9274.9At3g02040821175SRG3 (senescence-related gene 3)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAVO.I.C.G.H.G.
78.399.963.3At5g17100831573-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
78.199.957.8At2g19850816504-F:molecular_function unknown;P:biological_process unknown;C:unknown;PMVOO.I.C.G.H.G.
74.399.956.8At5g25070832578unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
74.199.9153.3At2g41380818736embryo-abundant protein-relatedF:methyltransferase activity;P:response to cadmium ion;C:mitochondrion;BPFOMAO.I.C.G.H.G.
74.099.9105.6At2g45130819120SPX3 (SPX DOMAIN GENE 3)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPOO.I.C.G.H.G.
73.999.9101.4At5g16000831457NIK1 (NSP-INTERACTING KINASE 1)F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.C.G.H.G.
73.399.962.6At3g04530819609PPCK2Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.O.I.C.G.H.G.
71.699.9248.2At2g27190817261PAP12 (PURPLE ACID PHOSPHATASE 12)secreted purple acid phosphatase precursorO.I.C.G.H.G.
71.599.942.1At3g15990820844SULTR3Encodes sulfate transporter Sultr3;4.O.I.C.G.H.G.
71.199.934.4At3g42725823305unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
71.099.9184.9At3g52190824384PHF1 (PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1)Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter.O.I.C.G.H.G.
70.699.9273.6At1g73010843632phosphataseF:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBFO.I.C.G.H.G.
69.999.929.1At3g44520--O.I.C.G.H.G.
69.899.9159.6At2g04000814926transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
69.599.957.6At5g53830835464VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFBMO.I.C.G.H.G.
68.899.944.4At5g57130835819protein bindingF:protein binding;P:protein metabolic process;C:cellular_component unknown;PBOAMO.I.C.G.H.G.
68.799.953.8At2g44690819077ARAC9A member of ROP GTPase gene family.O.I.C.G.H.G.
68.499.925.1At2g27950817339-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOMPFO.I.C.G.H.G.
68.099.9133.6At2g02570814787nucleic acid bindingF:nucleic acid binding;P:unknown;C:unknown;MFOPBO.I.C.G.H.G.
66.899.8164.2At2g29440817493ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
66.399.867.4At1g46264841110AT-HSFB4member of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
64.999.842.1At2g16580816158auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
64.899.876.0At5g25240832595-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
64.199.864.4At1g08310837351esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:unknown;BPOMFAO.I.C.G.H.G.
63.699.876.0At1g67820843108protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVO.I.C.G.H.G.
63.499.814.1At1g66310842948F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
63.399.8230.6At2g27080817250harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
62.599.838.9At5g20540832176ATBRXL4 (BREVIS RADIX-LIKE 4)Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.O.I.C.G.H.G.
62.099.886.0At2g03780814905translin family proteinF:sequence-specific DNA binding, DNA binding;P:biological_process unknown;C:unknown;MFAOPO.I.C.G.H.G.
61.899.851.3At5g67160836851EPS1 (ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1)Encodes a member of the BAHD acyltransferase superfamily. Mutants have enhanced susceptibility to virulent and avirulent pathogens and are defective in pathogen induced SA biosynthesis. EPS1 may act upstream of SA biosynthesis as application of SA can rescue the mutant phenotype.O.I.C.G.H.G.
61.499.852.5At3g52310824396ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMFAPVO.I.C.G.H.G.
60.999.8152.8At5g17340831600unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
60.899.830.7At3g43110823370unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
59.799.834.2At1g440603767336transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
59.399.860.3At1g15170838083MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:chloroplast, membrane;BOPFMAO.I.C.G.H.G.
57.299.826.9At3g50610824224unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBO.I.C.G.H.G.
56.599.8104.4At2g41480818746electron carrier/ heme binding / peroxidaseF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBMO.I.C.G.H.G.
55.299.825.7At1g36920840600unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOO.I.C.G.H.G.
54.499.8124.1At2g14130815899transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
54.399.820.9At2g01660814695PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6)Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.O.I.C.G.H.G.
53.999.844.0At3g05630819730PLDP2Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.O.I.C.G.H.G.
52.699.8325.6At3g17790821047PAP17F:phosphatase activity, protein serine/threonine phosphatase activity, acid phosphatase activity;P:response to hydrogen peroxide, cellular phosphate ion homeostasis;C:cell surface;MOBPFAO.I.C.G.H.G.
52.499.819.3At2g19610816480zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MFOPO.I.C.G.H.G.
49.699.8148.6At1g45976841106SBP1 (s-ribonuclease binding protein 1)F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFBO.I.C.G.H.G.
49.399.8127.3At3g53610824529ATRAB8GTPase AtRAB8 (atrab8)O.I.C.G.H.G.
49.299.863.2At5g57100835814transporter-relatedF:unknown;P:unknown;C:membrane;PMFOBO.I.C.G.H.G.
49.199.899.2At2g47260819339WRKY23member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
48.999.819.5At3g04420819597anac048 (Arabidopsis NAC domain containing protein 48)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POO.I.C.G.H.G.
48.899.8199.4At1g65840842894ATPAO4 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 4)encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.O.I.C.G.H.G.
48.599.863.8At1g23140838922C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPFOO.I.C.G.H.G.
48.599.850.0At1g19260838509hAT dimerisation domain-containing proteinF:protein dimerization activity;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
48.299.8115.0At4g36350829787PAP25 (PURPLE ACID PHOSPHATASE 25)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFAO.I.C.G.H.G.
47.699.8144.8At2g07360815305SH3 domain-containing proteinF:binding;P:unknown;C:cytosol, nucleus, plasma membrane, membrane;OPMFBO.I.C.G.H.G.



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