Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1797-raw-cel-1669767976
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
354.4100.098.3At2g16580816158auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
284.2100.0104.7At1g45180841086zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBO.I.C.G.H.G.
268.7100.0127.7At1g52940841727PAP5 (PURPLE ACID PHOSPHATASE 5)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFAO.I.C.G.H.G.
226.0100.061.4At3g42725823305unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
212.1100.0431.0At2g27970817341CKS2 (CDK-subunit 2)F:cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity;P:cell cycle;C:cellular_component unknown;MFOPO.I.C.G.H.G.
207.9100.0180.1At2g15760816070calmodulin-binding proteinF:calmodulin binding;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
205.0100.052.7At1g07880837303ATMPK13member of MAP KinaseO.I.C.G.H.G.
204.4100.0218.4At1g44110841014CYCA1F:cyclin-dependent protein kinase regulator activity;P:response to cyclopentenone, regulation of cell cycle;C:nucleus;MPOFVBO.I.C.G.H.G.
200.6100.049.6At2g27120817254TIL2 (TILTED 2)Encodes a protein with similarity to DNA polymerase epsilon catalytic subunit. Based on yeast two hybrid analysis, not predicted to be a subunit of the DNA polymerase epsilon complex. No phenotype observed in homozygous mutant embryos or plants but in combination with TIL1-1/til1-1 heterozygotes arrest earlier than til1 homozygotes suggesting TIL2 functions redundantly with TIL1.O.I.C.G.H.G.
181.7100.049.5At2g16450816143F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
177.6100.0184.1At1g08430837363ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited).O.I.C.G.H.G.
171.9100.0229.3At1g71380843479ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOFO.I.C.G.H.G.
165.4100.0325.5At3g53620824530AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.O.I.C.G.H.G.
161.599.992.3At1g61810842478BGLU45 (BETA-GLUCOSIDASE 45)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAO.I.C.G.H.G.
159.599.9224.4At5g25190832590ethylene-responsive element-binding protein, putativeencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.O.I.C.G.H.G.
157.799.9159.2At3g53540824522unknown proteinF:unknown;P:unknown;C:plasma membrane;OMBFPAVO.I.C.G.H.G.
156.999.9133.2At5g18690831987AGP25 (ARABINOGALACTAN PROTEINS 25)F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PMOVFBO.I.C.G.H.G.
155.199.9139.8At2g44830819092protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVAO.I.C.G.H.G.
151.099.9115.9At5g25240832595-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
144.399.951.1At3g54630824628-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
143.499.9217.0At5g22460832307esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:cell wall, vacuole, plant-type cell wall;BPOFO.I.C.G.H.G.
140.799.9227.3At2g19990816518PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.O.I.C.G.H.G.
135.799.9418.1At2g44450819052BGLU15 (BETA GLUCOSIDASE 15)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFAO.I.C.G.H.G.
134.699.9142.4At2g45130819120SPX3 (SPX DOMAIN GENE 3)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPOO.I.C.G.H.G.
133.899.975.2At2g44690819077ARAC9A member of ROP GTPase gene family.O.I.C.G.H.G.
125.399.9377.5At2g42570818857unknown proteinF:unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
123.399.9191.3At2g11810815657MGDCMGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.O.I.C.G.H.G.
122.299.972.7At1g63650842669EGL3 (ENHANCER OF GLABRA 3)Mutant has reduced trichomes, anthocyanin, and seed coat mucilage and abnormally patterned stomates. Encodes a bHLH Transcription Factor 1. The protein is functionally redundant with GL3 and TT8 and interacts with TTG1, the myb proteins GL1, PAP1 and 2, CPC and TRY, and it will form heterodimers with GL3. Expression in N (non-hair cell forming) cell layers is negatively regulated by WER. Expression in H cells (hair cell forming) is promoted by CPC/TRY.O.I.C.G.H.G.
121.499.967.5At2g02680814797DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOFO.I.C.G.H.G.
118.099.9247.6At2g28510817399Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleolus;POMFBO.I.C.G.H.G.
117.799.9296.5At2g04040814938TX1AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+.O.I.C.G.H.G.
106.699.9402.3At5g20150832137SPX1 (SPX DOMAIN GENE 1)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBAO.I.C.G.H.G.
103.099.928.7At2g01660814695PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6)Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.O.I.C.G.H.G.
102.999.9296.0At1g17710838347phosphataseF:phosphatase activity;P:metabolic process;C:unknown;MPOBFO.I.C.G.H.G.
101.799.9312.7At3g02040821175SRG3 (senescence-related gene 3)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAVO.I.C.G.H.G.
99.299.9292.1At2g27190817261PAP12 (PURPLE ACID PHOSPHATASE 12)secreted purple acid phosphatase precursorO.I.C.G.H.G.
99.299.9288.7At2g27080817250harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
97.299.980.7At1g66040842917VIM4 (VARIANT IN METHYLATION 4)predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH4/VIM4 cDNA through RT-PCR were unsuccessful and analysis of the expression of this gene is difficult since it shares 99% nucleotide identity with ORTH5/VIM2.O.I.C.G.H.G.
97.299.919.2At4g17980827523anac071 (Arabidopsis NAC domain containing protein 71)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
97.099.928.8At1g73700843705MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
95.899.970.0At5g17100831573-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
94.799.953.9At1g334603766895transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
93.499.9184.6At2g04000814926transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
93.399.9113.1At2g03800814906GEK1 (GEKO1)encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.O.I.C.G.H.G.
93.099.9126.9At1g33940840291-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
92.199.966.3At5g53830835464VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFBMO.I.C.G.H.G.
91.699.922.5At1g45100841077polyadenylate-binding protein, putative / PABP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.
91.299.972.7At5g25150832586TAF5 (TBP-ASSOCIATED FACTOR 5)Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).O.I.C.G.H.G.
90.299.9265.1At3g54260824593unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PMO.I.C.G.H.G.
89.899.953.7At5g62550836375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMBFPVAO.I.C.G.H.G.
89.699.9198.7At2g07360815305SH3 domain-containing proteinF:binding;P:unknown;C:cytosol, nucleus, plasma membrane, membrane;OPMFBO.I.C.G.H.G.
89.099.956.6At3g05630819730PLDP2Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.O.I.C.G.H.G.
87.599.973.2At1g15170838083MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:chloroplast, membrane;BOPFMAO.I.C.G.H.G.
87.399.9359.2At2g02120814743PDF2.1Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
84.599.9299.3At1g73010843632phosphataseF:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBFO.I.C.G.H.G.
84.199.9115.5At2g46880819301PAP14 (PURPLE ACID PHOSPHATASE 14)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOO.I.C.G.H.G.
82.799.941.3At4g02170828119unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
82.499.959.7At5g25070832578unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
81.499.942.8At1g44780841042unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
78.299.9173.2At5g17340831600unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
78.299.937.4At4g23720828472unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
76.299.999.9At1g44900841056ATP binding / DNA binding / DNA-dependent ATPaseF:DNA-dependent ATPase activity, DNA binding, ATP binding;P:DNA replication, DNA replication initiation;C:nucleus, chloroplast;MOBFPAVO.I.C.G.H.G.
76.199.942.9At5g20540832176ATBRXL4 (BREVIS RADIX-LIKE 4)Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.O.I.C.G.H.G.
75.699.9149.7At5g20790832202unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
75.299.941.8At5g24600832531unknown proteinF:unknown;P:biological_process unknown;C:plasma membrane;PBOO.I.C.G.H.G.
73.599.9121.3At2g47260819339WRKY23member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
73.599.9104.1At5g63130836433octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
72.999.9137.0At1g08650837387PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.O.I.C.G.H.G.
72.899.945.9At5g47250834772disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:mitochondrion;PMBOFAO.I.C.G.H.G.
72.099.945.4At5g57130835819protein bindingF:protein binding;P:protein metabolic process;C:cellular_component unknown;PBOAMO.I.C.G.H.G.
71.999.942.6At1g22090838814emb2204 (embryo defective 2204)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PO.I.C.G.H.G.
71.499.930.0At1g52470841678hydrolaseF:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
70.199.9207.1At1g69880843324ATH8 (thioredoxin H-type 8)F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAVO.I.C.G.H.G.
67.499.8146.2At2g41380818736embryo-abundant protein-relatedF:methyltransferase activity;P:response to cadmium ion;C:mitochondrion;BPFOMAO.I.C.G.H.G.
67.199.896.6At5g16000831457NIK1 (NSP-INTERACTING KINASE 1)F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.C.G.H.G.
65.899.8111.3At2g20800816609NDB4 (NAD(P)H dehydrogenase B4)F:NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion, plastid;BOFPAMO.I.C.G.H.G.
65.699.853.0At2g19850816504-F:molecular_function unknown;P:biological_process unknown;C:unknown;PMVOO.I.C.G.H.G.
64.499.860.6At3g45960823739ATEXLA3 (arabidopsis thaliana expansin-like a3)member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)O.I.C.G.H.G.
64.299.892.5At1g68360843165zinc finger protein-relatedF:transcription factor activity;P:regulation of transcription;C:intracellular;PMOO.I.C.G.H.G.
63.999.853.5At3g52310824396ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMFAPVO.I.C.G.H.G.
63.199.849.6At1g19200838503senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
61.899.8341.8At2g39700818553ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.O.I.C.G.H.G.
61.399.8157.3At2g29440817493ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
61.399.881.7At3g07540819943formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MOPFBVO.I.C.G.H.G.
61.299.852.3At1g48260841246CIPK17 (CBL-INTERACTING PROTEIN KINASE 17)Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.21), which has also been reported as a member of the CBL-interacting protein kinases (CIPK17).O.I.C.G.H.G.
59.999.8145.5At1g50490841471UBC20 (ubiquitin-conjugating enzyme 20)Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.O.I.C.G.H.G.
59.299.873.6At5g13840831230FZR3 (FIZZY-RELATED 3)F:signal transducer activity;P:signal transduction;C:chloroplast, heterotrimeric G-protein complex;MFBOPAO.I.C.G.H.G.
59.099.841.7At1g60570842352kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMVBOAFO.I.C.G.H.G.
58.999.820.4At2g19610816480zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MFOPO.I.C.G.H.G.
57.599.836.2At4g19730827717glycosyl hydrolase family 18 proteinF:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPAO.I.C.G.H.G.
56.999.833.4At1g440603767336transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
56.899.8104.7At2g41480818746electron carrier/ heme binding / peroxidaseF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBMO.I.C.G.H.G.
55.099.8125.5At4g12110826819SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1)Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.O.I.C.G.H.G.
54.599.825.7At3g44520--O.I.C.G.H.G.
54.399.832.7At2g43140818916DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBFO.I.C.G.H.G.
54.199.8139.7At2g27960817340CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)catalytic subunit of cyclin dependent kinase 1. physically interact with cyclin-dependent kinases (CDKs) and play an essential, but yet not entirely resolved, role in the regulation of the cell cycleO.I.C.G.H.G.
53.999.866.1At5g57100835814transporter-relatedF:unknown;P:unknown;C:membrane;PMFOBO.I.C.G.H.G.
52.499.825.8At3g53760824543tubulin family proteinF:tubulin binding;P:microtubule cytoskeleton organization;C:spindle pole, microtubule organizing center;MFOPO.I.C.G.H.G.
52.099.8130.6At3g53610824529ATRAB8GTPase AtRAB8 (atrab8)O.I.C.G.H.G.
51.699.8157.7At3g52190824384PHF1 (PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1)Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter.O.I.C.G.H.G.



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