Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1592-raw-cel-1617526832
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
67.499.879.1At1g59640842254ZCW32A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.O.I.C.G.H.G.
62.299.8314.5At5g22430832304unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
61.499.8123.7At1g72290843561trypsin and protease inhibitor family protein / Kunitz family proteinF:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
58.199.885.9At5g61605836282unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
56.099.8172.6At5g59120836030ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13)F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
54.099.8198.9At4g15440827215HPL1 (HYDROPEROXIDE LYASE 1)Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase.O.I.C.G.H.G.
53.999.831.7At3g10890820259(1-4)-beta-mannan endohydrolase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOAO.I.C.G.H.G.
51.399.865.9At1g28430839741CYP705A24member of CYP705AO.I.C.G.H.G.
51.099.846.9At1g15360838105SHN1 (SHINE 1)Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2.O.I.C.G.H.G.
46.299.858.6At5g55720835666pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
45.699.839.1At4g12410826850auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
43.899.8268.3At5g07530830646GRP17 (GLYCINE RICH PROTEIN 17)encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.O.I.C.G.H.G.
39.999.892.3At3g10570820222CYP77A6member of CYP77AO.I.C.G.H.G.
39.099.822.4At1g23600838970unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
37.899.8310.8At5g33370833315GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
37.099.730.0At5g45960834636GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
36.699.723.7At1g23520838960unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
35.499.7109.7At1g23240838933caleosin-related family proteinF:lipase activity, calcium ion binding;P:unknown;C:extracellular region;PFOO.I.C.G.H.G.
35.299.7366.4At5g07550830648GRP19 (GLYCINE-RICH PROTEIN 19)member of Oleosin-like protein familyO.I.C.G.H.G.
34.799.732.4At1g30350839915pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
33.999.779.4At3g05180819682GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:apoplast;PBFMOO.I.C.G.H.G.
33.499.7175.2At5g07560830649GRP20 (GLYCINE-RICH PROTEIN 20)Lipid-binding oleosins, glycine-rich protein.O.I.C.G.H.G.
32.299.7136.5At1g75930843926EXL6member of Lipase proteinsO.I.C.G.H.G.
30.199.7248.9At4g04460825776aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPBO.I.C.G.H.G.
29.099.733.4At1g16705838241p300/CBP acetyltransferase-related protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
28.999.756.1At1g75880843921family II extracellular lipase 1 (EXL1)F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOMO.I.C.G.H.G.
28.499.716.4At3g53080824474galactose-binding lectin family proteinF:sugar binding, beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;POMBO.I.C.G.H.G.
28.299.7113.9At3g02310821151SEP2 (SEPALLATA 2)MADS-box protein, binds K domain of AG in vivoO.I.C.G.H.G.
28.099.757.1At3g27810822401ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.O.I.C.G.H.G.
27.899.7144.5At4g08670826433protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;OPMBFVO.I.C.G.H.G.
27.799.784.9At1g58430842212RXF26Encodes an anther-specific proline-rich protein.O.I.C.G.H.G.
27.799.781.2At1g49430841367LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2)Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation.O.I.C.G.H.G.
27.799.737.1At4g10850826682nodulin MtN3 family proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOBO.I.C.G.H.G.
27.199.757.5At1g66350842953RGL1 (RGA-LIKE 1)Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.O.I.C.G.H.G.
26.899.735.8At3g16170820862acyl-activating enzyme 13 (AAE13)F:catalytic activity, AMP binding;P:metabolic process;C:membrane;BOFMPAVO.I.C.G.H.G.
26.699.734.7At4g14695827120unknown proteinF:unknown;P:biological_process unknown;C:mitochondrion;MFPOO.I.C.G.H.G.
26.599.7122.7At4g25040828607integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
26.399.762.1At1g01600839347CYP86A4Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly at highest level in mature stems and flowers.O.I.C.G.H.G.
26.399.746.6At1g63710842675CYP86A7Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at highest level in mature stems and flowers.O.I.C.G.H.G.
26.299.746.1At3g26125822212CYP86C2encodes a protein with cytochrome P450 domainO.I.C.G.H.G.
26.099.719.4At3g21920821747pollen coat receptor kinase, putativeF:molecular_function unknown;P:biological_process unknown;C:extracellular region;PO.I.C.G.H.G.
25.899.765.0At4g20050827750QRT3 (QUARTET 3)Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.O.I.C.G.H.G.
25.599.7111.8At3g54340824601AP3 (APETALA 3)Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.O.I.C.G.H.G.
25.399.649.2At1g63060842609unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
25.299.689.7At1g42470840851patched family proteinF:hedgehog receptor activity;P:unknown;C:plasma membrane, membrane;MOBFPAO.I.C.G.H.G.
25.199.6179.1At5g24420832513glucosamine/galactosamine-6-phosphate isomerase-relatedF:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFPO.I.C.G.H.G.
24.999.6355.1At3g15400820779ATA20Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein.O.I.C.G.H.G.
24.899.687.4At4g19430827684unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
24.799.6332.3At1g66850843003protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
24.799.6322.0At2g31980817757cysteine proteinase inhibitor-relatedF:cysteine-type endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;PMOO.I.C.G.H.G.
24.399.696.9At1g15260838093unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
23.999.637.4At1g70720843409invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
23.299.662.8At4g18960827631AG (AGAMOUS)Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.O.I.C.G.H.G.
22.899.68.3At5g03590831783GDSL-motif lipase/hydrolase protein-relatedF:hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:cellular_component unknown;PFO.I.C.G.H.G.
22.799.676.7At1g69120843244AP1 (APETALA1)Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.O.I.C.G.H.G.
22.799.665.4At4g16590827360ATCSLA01encodes a gene similar to cellulose synthaseO.I.C.G.H.G.
22.299.677.2At5g07540830647GRP16 (GLYCINE-RICH PROTEIN 16)encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12).O.I.C.G.H.G.
22.199.660.0At2g23800816912GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2)encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthaseO.I.C.G.H.G.
22.199.619.3At5g381208337924-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinF:4-coumarate-CoA ligase activity;P:metabolic process;C:unknown;BOFMPAVO.I.C.G.H.G.
21.999.634.9At2g07695815371cytochrome c oxidase subunit II, putativeF:electron carrier activity, cytochrome-c oxidase activity, copper ion binding, heme binding;P:electron transport chain, respiratory electron transport chain;C:integral to membrane, membrane;MOFBPO.I.C.G.H.G.
21.699.6339.6At2g20870816620cell wall protein precursor, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMFO.I.C.G.H.G.
21.399.634.4At5g61430836264ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
21.299.680.0At1g24260839040SEP3 (SEPALLATA3)Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.O.I.C.G.H.G.
21.199.6156.8At2g07560815329AHA6 (Arabidopsis H(+)-ATPase 6)F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAVO.I.C.G.H.G.
20.799.6135.0At1g18280838408protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;POBMO.I.C.G.H.G.
20.699.671.3At2g38110818389GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)Encodes a protein with glycerol-3-phosphate acyltransferase activity.O.I.C.G.H.G.
20.099.6150.8At5g20240832146PI (PISTILLATA)Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities.O.I.C.G.H.G.
20.099.625.7At5g40350834033MYB24 (myb domain protein 24)Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I.C.G.H.G.
19.899.642.6At1g25330839117basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO.I.C.G.H.G.
19.899.636.0At4g25950828701VATG3 (vacuolar ATP synthase G3)V-ATPase G-subunit like proteinO.I.C.G.H.G.
19.599.6272.6At1g72260843558THI2.1 (THIONIN 2.1)Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.O.I.C.G.H.G.
18.699.532.8At4g34510829602KCS17 (3-KETOACYL-COA SYNTHASE 17)Encodes KCS17, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).O.I.C.G.H.G.
18.699.532.1At1g49740841397phospholipase C/ phosphoric diester hydrolaseF:phospholipase C activity, phosphoric diester hydrolase activity;P:intracellular signaling cascade, lipid metabolic process;C:endomembrane system;FPOBMO.I.C.G.H.G.
18.599.552.6At2g42990818901GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
18.499.527.1At2g04020814928GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:N-terminal protein myristoylation, lipid metabolic process;C:endomembrane system;PBMO.I.C.G.H.G.
18.299.5100.7At5g18670831985BMY3putative beta-amylase BMY3 (BMY3)O.I.C.G.H.G.
18.299.550.9At2g17730816282zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBO.I.C.G.H.G.
18.199.536.7At4g28680828986tyrosine decarboxylase, putativeEncodes a stress-induced tyrosine decarboxylase (TyrDC). Recombinant (His)6-TyrDC expressed in E. coli catalyzes the conversion of L-tyrosine to tyramine. Recombinant TyrDC forms tetramers.O.I.C.G.H.G.
18.099.538.9At1g11190837660BFN1 (BIFUNCTIONAL NUCLEASE I)Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).O.I.C.G.H.G.
17.799.5352.7At3g07850819976exopolygalacturonase / galacturan 1,4-alpha-galacturonidase / pectinaseF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMVAO.I.C.G.H.G.
17.799.546.8At4g21590828245ENDO3 (endonuclease 3)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.O.I.C.G.H.G.
17.699.589.2At2g28355817383LCR5 (Low-molecular-weight cysteine-rich 5)F:molecular_function unknown;P:defense response;C:endomembrane system;PO.I.C.G.H.G.
17.699.558.7At4g23900828490nucleoside diphosphate kinase 4 (NDK4)F:nucleoside diphosphate kinase activity, ATP binding;P:UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process;C:mitochondrion;BOMPAFVO.I.C.G.H.G.
17.199.515.1At1g13130837870glycosyl hydrolase family 5 protein / cellulase family proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BPFOO.I.C.G.H.G.
17.099.5102.4At1g52680841700late embryogenesis abundant protein-related / LEA protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.899.5349.9At1g48750841297protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
16.699.534.2At1g56210842074copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
16.599.533.3At2g45600819168hydrolaseF:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPMFAVO.I.C.G.H.G.
16.499.535.5At3g21970821756receptor-like protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
16.399.553.3At2g16750816176protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
16.299.547.1At4g02140827460unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
16.299.544.9At3g57810824950OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:unknown;MPOFO.I.C.G.H.G.
16.299.529.5At5g07520830645GRP18 (GLYCINE-RICH PROTEIN 18)encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12).O.I.C.G.H.G.
16.199.558.5At5g62850836406AtVEX1 (VEGETATIVE CELL EXPRESSED1)Encodes a protein that is expressed in vegetative cells of pollen.O.I.C.G.H.G.
16.099.560.9At3g18850821418LPAT5F:acyltransferase activity;P:metabolic process;C:unknown;MBOFPVO.I.C.G.H.G.
16.099.515.5At1g64690842777unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
15.799.5145.5At2g28470817395BGAL8 (beta-galactosidase 8)putative beta-galactosidase (BGAL8 gene)O.I.C.G.H.G.
15.599.522.7At3g18360821365VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
15.599.513.0At3g09930820154GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
15.299.4214.2At4g13560826989UNE15 (unfertilized embryo sac 15)F:molecular_function unknown;P:embryonic development ending in seed dormancy, double fertilization forming a zygote and endosperm;C:cellular_component unknown;PMBFOO.I.C.G.H.G.



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